Jihyun F. Kim - Publications

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87 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Kim S, Jeong H, Kim EY, Kim JF, Lee SY, Yoon SH. Genomic and transcriptomic landscape of Escherichia coli BL21(DE3). Nucleic Acids Research. PMID 28379538 DOI: 10.1093/nar/gkx228  0.64
2016 Kwak MJ, Kwon SK, Yoon JK, Song JY, Seo JG, Chung MJ, Kim JF. Evolutionary architecture of the infant-adapted group of Bifidobacterium species associated with the probiotic function. Systematic and Applied Microbiology. PMID 27524178 DOI: 10.1016/j.syapm.2016.07.004  0.64
2016 Kwak MJ, Kim MS, Kwon SK, Cho SH, Kim JF. Genome sequence of Escherichia coli NCCP15653, a group D strain isolated from a diarrhea patient. Gut Pathogens. 8: 7. PMID 26913081 DOI: 10.1186/s13099-016-0084-6  0.64
2015 Song JY, Yoo YJ, Lim SK, Cha SH, Kim JE, Roe JH, Kim JF, Yoon YJ. Complete genome sequence of Streptomyces venezuelae ATCC 15439, a promising cell factory for production of secondary metabolites. Journal of Biotechnology. PMID 26718561 DOI: 10.1016/j.jbiotec.2015.12.028  0.64
2015 Kwak MJ, Kwon SK, Yoon JH, Kim JF. Genome sequence of Lysobacter dokdonensis DS-58(T), a gliding bacterium isolated from soil in Dokdo, Korea. Standards in Genomic Sciences. 10: 123. PMID 26664701 DOI: 10.1186/s40793-015-0116-8  0.64
2015 Kwon SK, Lee HG, Kwak MJ, Kim JF. Genome sequence of the marine flavobacterium Croceitalea dokdonensis DOKDO 023 that contains proton- and sodium-pumping rhodopsins. Marine Genomics. PMID 26631417 DOI: 10.1016/j.margen.2015.11.011  0.64
2015 Kwak MJ, Yoon JK, Kwon SK, Chung MJ, Seo JG, Kim JF. Complete genome sequence of the probiotic bacterium Bifidobacterium breve KCTC 12201BP isolated from a healthy infant. Journal of Biotechnology. PMID 26439429 DOI: 10.1016/j.jbiotec.2015.09.035  0.64
2015 Kwon SK, Kwak MJ, Seo JG, Chung MJ, Kim JF. Complete genome sequence of Bifidobacterium longum KCTC 12200BP, a probiotic strain promoting the intestinal health. Journal of Biotechnology. PMID 26439427 DOI: 10.1016/j.jbiotec.2015.09.039  0.64
2015 Cha JY, Han S, Hong HJ, Cho H, Kim D, Kwon Y, Kwon SK, Crüsemann M, Bok Lee Y, Kim JF, Giaever G, Nislow C, Moore BS, Thomashow LS, Weller DM, et al. Microbial and biochemical basis of a Fusarium wilt-suppressive soil. The Isme Journal. PMID 26057845 DOI: 10.1038/ismej.2015.95  0.64
2015 Kwak MJ, Kwon SK, Cho SH, Kim JF. Genome sequences of the Shiga-like toxin-producing Escherichia coli NCCP15655 and NCCP15656. Gut Pathogens. 7: 13. PMID 25991925 DOI: 10.1186/s13099-015-0060-6  0.64
2015 Na YA, Lee JY, Bang WJ, Lee HJ, Choi SI, Kwon SK, Jung KH, Kim JF, Kim P. Growth retardation of Escherichia coli by artificial increase of intracellular ATP. Journal of Industrial Microbiology & Biotechnology. 42: 915-24. PMID 25838237 DOI: 10.1007/s10295-015-1609-6  0.64
2015 Yoon SH, Park YK, Kim JF. PAIDB v2.0: exploration and analysis of pathogenicity and resistance islands. Nucleic Acids Research. 43: D624-30. PMID 25336619 DOI: 10.1093/nar/gku985  0.64
2014 Kwak MJ, Jeong H, Madhaiyan M, Lee Y, Sa TM, Oh TK, Kim JF. Genome information of Methylobacterium oryzae, a plant-probiotic methylotroph in the phyllosphere. Plos One. 9: e106704. PMID 25211235 DOI: 10.1371/journal.pone.0106704  0.64
2014 Kwak MJ, Lee JS, Lee KC, Kim KK, Eom MK, Kim BK, Kim JF. Sulfitobacter geojensis sp. nov., Sulfitobacter noctilucae sp. nov., and Sulfitobacter noctilucicola sp. nov., isolated from coastal seawater. International Journal of Systematic and Evolutionary Microbiology. 64: 3760-7. PMID 25122614 DOI: 10.1099/ijs.0.065961-0  0.64
2014 Eun CS, Kim BK, Han DS, Kim SY, Kim KM, Choi BY, Song KS, Kim YS, Kim JF. Differences in gastric mucosal microbiota profiling in patients with chronic gastritis, intestinal metaplasia, and gastric cancer using pyrosequencing methods. Helicobacter. 19: 407-16. PMID 25052961 DOI: 10.1111/hel.12145  0.64
2013 Lee HJ, Kim IJ, Kim JF, Choi IG, Kim KH. An expansin from the marine bacterium Hahella chejuensis acts synergistically with xylanase and enhances xylan hydrolysis. Bioresource Technology. 149: 516-9. PMID 24140897 DOI: 10.1016/j.biortech.2013.09.086  0.64
2013 Chi WJ, Park JS, Kwak MJ, Kim JF, Chang YK, Hong SK. Isolation and characterization of a novel agar-degrading marine bacterium, Gayadomonas joobiniege gen, nov, sp. nov., from the Southern Sea, Korea. Journal of Microbiology and Biotechnology. 23: 1509-18. PMID 23966020 DOI: 10.4014/jmb.1308.08007  0.64
2013 Dai J, Yoon SH, Sim HY, Yang YS, Oh TK, Kim JF, Hong JW. Charting microbial phenotypes in multiplex nanoliter batch bioreactors. Analytical Chemistry. 85: 5892-9. PMID 23581968 DOI: 10.1021/ac400648z  0.64
2013 Kwon SK, Kim BK, Song JY, Kwak MJ, Lee CH, Yoon JH, Oh TK, Kim JF. Genomic makeup of the marine flavobacterium Nonlabens (Donghaeana) dokdonensis and identification of a novel class of rhodopsins. Genome Biology and Evolution. 5: 187-99. PMID 23292138 DOI: 10.1093/gbe/evs134  0.64
2012 Kwak MJ, Song JY, Kim BK, Chi WJ, Kwon SK, Choi S, Chang YK, Hong SK, Kim JF. Genome sequence of the agar-degrading marine bacterium Alteromonadaceae sp. strain G7. Journal of Bacteriology. 194: 6961-2. PMID 23209220 DOI: 10.1128/JB.01931-12  0.64
2012 Jeong H, Lee DH, Kim SH, Kim HJ, Lee K, Song JY, Kim BK, Sung BH, Park JC, Sohn JH, Koo HM, Kim JF. Genome sequence of the thermotolerant yeast Kluyveromyces marxianus var. marxianus KCTC 17555. Eukaryotic Cell. 11: 1584-5. PMID 23193140 DOI: 10.1128/EC.00260-12  0.64
2012 Song JY, Kwak MJ, Lee KY, Kong HG, Kim BK, Kwon SK, Lee SW, Kim JF. Draft genome sequence of the antifungal-producing plant-benefiting bacterium Burkholderia pyrrocinia CH-67. Journal of Bacteriology. 194: 6649-50. PMID 23144399 DOI: 10.1128/JB.01779-12  0.64
2012 Yu DS, Jeong H, Lee DH, Kwon SK, Song JY, Kim BK, Park MS, Ji GE, Oh TK, Kim JF. Complete genome sequence of the probiotic bacterium Bifidobacterium bifidum strain BGN4. Journal of Bacteriology. 194: 4757-8. PMID 22887663 DOI: 10.1128/JB.00988-12  0.64
2012 Kwak MJ, Song JY, Kim SY, Jeong H, Kang SG, Kim BK, Kwon SK, Lee CH, Yu DS, Park SH, Kim JF. Complete genome sequence of the endophytic bacterium Burkholderia sp. strain KJ006. Journal of Bacteriology. 194: 4432-3. PMID 22843575 DOI: 10.1128/JB.00821-12  0.64
2012 Kim BK, Lee SH, Kim SY, Jeong H, Kwon SK, Lee CH, Song JY, Yu DS, Kang SG, Kim JF. Genome sequence of an oligohaline hyperthermophilic archaeon, Thermococcus zilligii AN1, isolated from a terrestrial geothermal freshwater spring. Journal of Bacteriology. 194: 3765-6. PMID 22740682 DOI: 10.1128/JB.00655-12  0.64
2012 Song JY, Kim HA, Kim JS, Kim SY, Jeong H, Kang SG, Kim BK, Kwon SK, Lee CH, Yu DS, Kim BS, Kim SH, Kwon SY, Kim JF. Genome sequence of the plant growth-promoting rhizobacterium Bacillus sp. strain JS. Journal of Bacteriology. 194: 3760-1. PMID 22740679 DOI: 10.1128/JB.00676-12  0.64
2012 Kim BK, Chung JH, Kim SY, Jeong H, Kang SG, Kwon SK, Lee CH, Song JY, Yu DS, Ryu CM, Kim JF. Genome sequence of the leaf-colonizing Bacterium Bacillus sp. strain 5B6, isolated from a cherry tree. Journal of Bacteriology. 194: 3758-9. PMID 22740678 DOI: 10.1128/JB.00682-12  0.64
2012 Kim BK, Song GC, Hong GH, Seong WK, Kim SY, Jeong H, Kang SG, Kwon SK, Lee CH, Song JY, Yu DS, Park MS, Cho SH, Kim JF. Genome sequence of the Shiga toxin-producing Escherichia coli strain NCCP15657. Journal of Bacteriology. 194: 3751-2. PMID 22740674 DOI: 10.1128/JB.00654-12  0.64
2012 Song JY, Yoo RH, Jang SY, Seong WK, Kim SY, Jeong H, Kang SG, Kim BK, Kwon SK, Lee CH, Yu DS, Park MS, Cho SH, Kim JF. Genome sequence of enterohemorrhagic Escherichia coli NCCP15658. Journal of Bacteriology. 194: 3749-50. PMID 22740673 DOI: 10.1128/JB.00653-12  0.64
2012 Jeong H, Zhao F, Igori D, Oh KH, Kim SY, Kang SG, Kim BK, Kwon SK, Lee CH, Song JY, Yu DS, Park MS, Cho SH, Kim JF. Genome sequence of the hemolytic-uremic syndrome-causing strain Escherichia coli NCCP15647. Journal of Bacteriology. 194: 3747-8. PMID 22740672 DOI: 10.1128/JB.00651-12  0.64
2012 Brulois KF, Chang H, Lee AS, Ensser A, Wong LY, Toth Z, Lee SH, Lee HR, Myoung J, Ganem D, Oh TK, Kim JF, Gao SJ, Jung JU. Construction and manipulation of a new Kaposi's sarcoma-associated herpesvirus bacterial artificial chromosome clone. Journal of Virology. 86: 9708-20. PMID 22740391 DOI: 10.1128/JVI.01019-12  0.64
2012 Yu DS, Lee DH, Kim SK, Lee CH, Song JY, Kong EB, Kim JF. Algorithm for predicting functionally equivalent proteins from BLAST and HMMER searches. Journal of Microbiology and Biotechnology. 22: 1054-8. PMID 22713980 DOI: 10.4014/jmb.1203.03050  0.64
2012 Yoon SH, Han MJ, Jeong H, Lee CH, Xia XX, Lee DH, Shim JH, Lee SY, Oh TK, Kim JF. Comparative multi-omics systems analysis of Escherichia coli strains B and K-12. Genome Biology. 13: R37. PMID 22632713 DOI: 10.1186/gb-2012-13-5-r37  0.64
2011 Kim BK, Jung MY, Yu DS, Park SJ, Oh TK, Rhee SK, Kim JF. Genome sequence of an ammonia-oxidizing soil archaeon, "Candidatus Nitrosoarchaeum koreensis" MY1. Journal of Bacteriology. 193: 5539-40. PMID 21914867 DOI: 10.1128/JB.05717-11  0.64
2011 Jeong H, Park SY, Chung WH, Kim SH, Kim N, Park SH, Kim JF. Draft genome sequence of the Paenibacillus polymyxa type strain (ATCC 842T), a plant growth-promoting bacterium. Journal of Bacteriology. 193: 5026-7. PMID 21742878 DOI: 10.1128/JB.05447-11  0.64
2011 Jin HM, Jeong H, Moon EJ, Math RK, Lee K, Kim HJ, Jeon CO, Oh TK, Kim JF. Complete genome sequence of the polycyclic aromatic hydrocarbon-degrading bacterium Alteromonas sp. strain SN2. Journal of Bacteriology. 193: 4292-3. PMID 21705606 DOI: 10.1128/JB.05252-11  0.64
2011 Asselin JE, Bonasera JM, Kim JF, Oh CS, Beer SV. Eop1 from a Rubus strain of Erwinia amylovora functions as a host-range limiting factor. Phytopathology. 101: 935-44. PMID 21469934 DOI: 10.1094/PHYTO-12-10-0339  0.64
2011 Glasner JD, Yang CH, Reverchon S, Hugouvieux-Cotte-Pattat N, Condemine G, Bohin JP, Van Gijsegem F, Yang S, Franza T, Expert D, Plunkett G, San Francisco MJ, Charkowski AO, Py B, Bell K, ... ... Kim JF, et al. Genome sequence of the plant-pathogenic bacterium Dickeya dadantii 3937. Journal of Bacteriology. 193: 2076-7. PMID 21217001 DOI: 10.1128/JB.01513-10  0.64
2011 Archer CT, Kim JF, Jeong H, Park JH, Vickers CE, Lee SY, Nielsen LK. The genome sequence of E. coli W (ATCC 9637): comparative genome analysis and an improved genome-scale reconstruction of E. coli. Bmc Genomics. 12: 9. PMID 21208457 DOI: 10.1186/1471-2164-12-9  0.64
2011 Dai J, Yoon SH, Sim HY, Oh TK, Kim JF, Hong JW. Batch cultivation of bacterial cells in nanoliter reactor array 15th International Conference On Miniaturized Systems For Chemistry and Life Sciences 2011, Microtas 2011. 3: 1710-1712.  0.64
2010 Song JY, Jeong H, Yu DS, Fischbach MA, Park HS, Kim JJ, Seo JS, Jensen SE, Oh TK, Lee KJ, Kim JF. Draft genome sequence of Streptomyces clavuligerus NRRL 3585, a producer of diverse secondary metabolites. Journal of Bacteriology. 192: 6317-8. PMID 20889745 DOI: 10.1128/JB.00859-10  0.64
2010 Kim JF, Jeong H, Park SY, Kim SB, Park YK, Choi SK, Ryu CM, Hur CG, Ghim SY, Oh TK, Kim JJ, Park CS, Park SH. Genome sequence of the polymyxin-producing plant-probiotic rhizobacterium Paenibacillus polymyxa E681. Journal of Bacteriology. 192: 6103-4. PMID 20851896 DOI: 10.1128/JB.00983-10  0.64
2010 Yoon SH, Kim SK, Kim JF. Secretory production of recombinant proteins in Escherichia coli. Recent Patents On Biotechnology. 4: 23-9. PMID 20201800 DOI: 10.2174/187220810790069550  0.64
2010 Kwon SK, Park YK, Kim JF. Genome-wide screening and identification of factors affecting the biosynthesis of prodigiosin by Hahella chejuensis, using Escherichia coli as a surrogate host. Applied and Environmental Microbiology. 76: 1661-8. PMID 20038694 DOI: 10.1128/AEM.01468-09  0.64
2010 Cha PH, Park SY, Park SY, Moon MW, Subhadra B, Oh TK, Kim E, Kim JF, Lee JK. Characterization of an adenylate cyclase gene (cyaB) deletion mutant of Corynebacterium glutamicum ATCC 13032. Applied Microbiology and Biotechnology. 85: 1061-8. PMID 19568747 DOI: 10.1007/s00253-009-2066-9  0.64
2009 Barrick JE, Yu DS, Yoon SH, Jeong H, Oh TK, Schneider D, Lenski RE, Kim JF. Genome evolution and adaptation in a long-term experiment with Escherichia coli. Nature. 461: 1243-7. PMID 19838166 DOI: 10.1038/nature08480  0.64
2009 Jeong H, Barbe V, Lee CH, Vallenet D, Yu DS, Choi SH, Couloux A, Lee SW, Yoon SH, Cattolico L, Hur CG, Park HS, Ségurens B, Kim SC, Oh TK, ... ... Kim JF, et al. Genome sequences of Escherichia coli B strains REL606 and BL21(DE3). Journal of Molecular Biology. 394: 644-52. PMID 19786035 DOI: 10.1016/j.jmb.2009.09.052  0.64
2009 Studier FW, Daegelen P, Lenski RE, Maslov S, Kim JF. Understanding the differences between genome sequences of Escherichia coli B strains REL606 and BL21(DE3) and comparison of the E. coli B and K-12 genomes. Journal of Molecular Biology. 394: 653-80. PMID 19765592 DOI: 10.1016/j.jmb.2009.09.021  0.64
2009 Daegelen P, Studier FW, Lenski RE, Cure S, Kim JF. Tracing ancestors and relatives of Escherichia coli B, and the derivation of B strains REL606 and BL21(DE3). Journal of Molecular Biology. 394: 634-43. PMID 19765591 DOI: 10.1016/j.jmb.2009.09.022  0.64
2009 Jo SH, Koo DH, Kim JF, Hur CG, Lee S, Yang TJ, Kwon SY, Choi D. Evolution of ribosomal DNA-derived satellite repeat in tomato genome. Bmc Plant Biology. 9: 42. PMID 19351415 DOI: 10.1186/1471-2229-9-42  0.64
2009 Choi SK, Park SY, Kim R, Kim SB, Lee CH, Kim JF, Park SH. Identification of a polymyxin synthetase gene cluster of Paenibacillus polymyxa and heterologous expression of the gene in Bacillus subtilis. Journal of Bacteriology. 191: 3350-8. PMID 19304848 DOI: 10.1128/JB.01728-08  0.64
2009 Kim JF, Jeong H, Yu DS, Choi SH, Hur CG, Park MS, Yoon SH, Kim DW, Ji GE, Park HS, Oh TK. Genome sequence of the probiotic bacterium Bifidobacterium animalis subsp. lactis AD011. Journal of Bacteriology. 191: 678-9. PMID 19011029 DOI: 10.1128/JB.01515-08  0.64
2009 Yoon SH, Jeong H, Kwon SK, Kim JF. Genomics, biological features, and biotechnological applications of Escherichia coli B: Is B for better? Systems Biology and Biotechnology of Escherichia Coli. 1-17. DOI: 10.1007/978-1-4020-9394-4_1  0.64
2008 Kim D, Kim JF, Yim JH, Kwon SK, Lee CH, Lee HK. Red to red - the marine bacterium Hahella chejuensis and its product prodigiosin for mitigation of harmful algal blooms. Journal of Microbiology and Biotechnology. 18: 1621-9. PMID 18955809  0.64
2008 Jeong H, Yoon SH, Yu DS, Oh TK, Kim JF. Recent progress of microbial genome projects in Korea. Biotechnology Journal. 3: 601-11. PMID 18446868 DOI: 10.1002/biot.200800016  0.64
2008 Kim JF, Jeong H, Lee JS, Choi SH, Ha M, Hur CG, Kim JS, Lee S, Park HS, Park YH, Oh TK. Complete genome sequence of Leuconostoc citreum KM20. Journal of Bacteriology. 190: 3093-4. PMID 18281406 DOI: 10.1128/JB.01862-07  0.64
2008 Choi SK, Park SY, Kim R, Lee CH, Kim JF, Park SH. Identification and functional analysis of the fusaricidin biosynthetic gene of Paenibacillus polymyxa E681. Biochemical and Biophysical Research Communications. 365: 89-95. PMID 17980146 DOI: 10.1016/j.bbrc.2007.10.147  0.64
2008 Park J, Park B, Jung K, Jang S, Yu K, Choi J, Kong S, Park J, Kim S, Kim H, Kim S, Kim JF, Blair JE, Lee K, Kang S, et al. CFGP: a web-based, comparative fungal genomics platform. Nucleic Acids Research. 36: D562-71. PMID 17947331 DOI: 10.1093/nar/gkm758  0.64
2007 Kang SH, Cho HS, Cheong H, Ryu CM, Kim JF, Park SH. Two bacterial entophytes eliciting both plant growth promotion and plant defense on pepper (Capsicum annuum L.). Journal of Microbiology and Biotechnology. 17: 96-103. PMID 18051359  0.64
2007 Nam D, Yoon SH, Kim JF. Ensemble learning of genetic networks from time-series expression data. Bioinformatics (Oxford, England). 23: 3225-31. PMID 17977884 DOI: 10.1093/bioinformatics/btm514  0.64
2007 Kim D, Lee JS, Park YK, Kim JF, Jeong H, Oh TK, Kim BS, Lee CH. Biosynthesis of antibiotic prodiginines in the marine bacterium Hahella chejuensis KCTC 2396. Journal of Applied Microbiology. 102: 937-44. PMID 17381736 DOI: 10.1111/j.1365-2672.2006.03172.x  0.64
2007 Yoon SH, Park YK, Lee S, Choi D, Oh TK, Hur CG, Kim JF. Towards pathogenomics: a web-based resource for pathogenicity islands. Nucleic Acids Research. 35: D395-400. PMID 17090594 DOI: 10.1093/nar/gkl790  0.64
2006 Bonasera JM, Kim JF, Beer SV. PR genes of apple: identification and expression in response to elicitors and inoculation with Erwinia amylovora. Bmc Plant Biology. 6: 23. PMID 17029637 DOI: 10.1186/1471-2229-6-23  0.64
2006 Kang HY, Kim JF, Kim MH, Park SH, Oh TK, Hur CG. MELDB: a database for microbial esterases and lipases. Febs Letters. 580: 2736-40. PMID 16647704 DOI: 10.1016/j.febslet.2006.04.034  0.64
2006 Meng X, Bonasera JM, Kim JF, Nissinen RM, Beer SV. Apple proteins that interact with DspA/E, a pathogenicity effector of Erwinia amylovora, the fire blight pathogen. Molecular Plant-Microbe Interactions : Mpmi. 19: 53-61. PMID 16404953 DOI: 10.1094/MPMI-19-0053  0.64
2006 Kim D, Park YK, Lee JS, Kim JF, Jeong H, Kim BS, Lee CH. Analysis of a prodigiosin biosynthetic gene cluster from the marine bacterium Hahella chejuensis KCTC 2396 Journal of Microbiology and Biotechnology. 16: 1912-1918.  0.64
2006 Jeong H, Kim JF, Park YK, Kim SB, Kim C, Park SH. Genome snapshot of paenibacillus polymyxa ATCC 842T Journal of Microbiology and Biotechnology. 16: 1650-1655.  0.64
2006 Jeong H, Yoon SH, Lee HK, Oh TK, Kim JF. Lessons from the sea: Genome sequence of an algicidal marine bacterium Hahella chehuensis Korean Journal of Microbiology and Biotechnology. 34: 1-6.  0.64
2006 Borejsza-Wysocka EE, Malnoy M, Aldwinckle HS, Meng X, Bonasera JM, Nissinen RM, Kim JF, Beer SV. The fire blight resistance of apple clones in which DspE-interacting proteins are silenced Acta Horticulturae. 704: 509-513.  0.64
2005 Oh CS, Kim JF, Beer SV. The Hrp pathogenicity island of Erwinia amylovora and identification of three novel genes required for systemic infectiondouble dagger. Molecular Plant Pathology. 6: 125-38. PMID 20565644 DOI: 10.1111/j.1364-3703.2005.00269.x  0.64
2005 Jeong H, Yim JH, Lee C, Choi SH, Park YK, Yoon SH, Hur CG, Kang HY, Kim D, Lee HH, Park KH, Park SH, Park HS, Lee HK, Oh TK, ... Kim JF, et al. Genomic blueprint of Hahella chejuensis, a marine microbe producing an algicidal agent. Nucleic Acids Research. 33: 7066-73. PMID 16352867 DOI: 10.1093/nar/gki1016  0.64
2005 Yoon SH, Hur CG, Kang HY, Kim YH, Oh TK, Kim JF. A computational approach for identifying pathogenicity islands in prokaryotic genomes. Bmc Bioinformatics. 6: 184. PMID 16033657 DOI: 10.1186/1471-2105-6-184  0.64
2005 Cheong H, Park SY, Ryu CM, Kim JF, Park SH, Park CS. Diversity of root-associated Paenibacillus spp. in winter crops from the southern part of Korea Journal of Microbiology and Biotechnology. 15: 1286-1298.  0.64
2005 Jung YJ, Kim HK, Kim JF, Park SH, Oh TK, Lee JK. A direct approach for finding functional lipolytic enzymes from the Paenibacillus polymyxa genome Journal of Microbiology and Biotechnology. 15: 155-160.  0.64
2004 Rojas CM, Ham JH, Schechter LM, Kim JF, Beer SV, Collmer A. The Erwinia chrysanthemi EC16 hrp/hrc gene cluster encodes an active Hrp type III secretion system that is flanked by virulence genes functionally unrelated to the Hrp system. Molecular Plant-Microbe Interactions : Mpmi. 17: 644-53. PMID 15195947 DOI: 10.1094/MPMI.2004.17.6.644  0.64
2004 Borejsza-Wysocka EE, Malnoy M, Meng X, Bonasera JM, Nissinen RM, Kim JF, Beer SV, Aldwinckle HS. Silencing of apple proteins that interact with DspE, a pathogenicity effector from Erwinia amylovora, as a strategy to increase resistance to fire blight Acta Horticulturae. 663: 469-474.  0.64
2002 Kim JF, Alfano JR. Pathogenicity islands and virulence plasmids of bacterial plant pathogens. Current Topics in Microbiology and Immunology. 264: 127-47. PMID 12012865  0.64
2002 Meng X, Bonasera JM, Kim JF, Nissinen RM, Beer SV. DspE of Erwinia amylovora interacts with receptor kinases of apple Acta Horticulturae. 590: 463-466.  0.64
2001 Kim JF. Revisiting the chlamydial type III protein secretion system: clues to the origin of type III protein secretion. Trends in Genetics : Tig. 17: 65-9. PMID 11173102 DOI: 10.1016/S0168-9525(00)02175-2  0.64
2000 Wei Z, Kim JF, Beer SV. Regulation of hrp genes and type III protein secretion in Erwinia amylovora by HrpX/HrpY, a novel two-component system, and HrpS. Molecular Plant-Microbe Interactions : Mpmi. 13: 1251-62. PMID 11059492 DOI: 10.1094/MPMI.2000.13.11.1251  0.64
1999 Kim JF, Garr ER, Bauer DW, Beer SV, Gustafson HL, Momol EA, Momol MT, Aldwinckle HS, Vanneste JL. Analysis of three bacterial strains isolated from symptomatic plants in Australia Acta Horticulturae. 489: 149-154.  0.64
1999 Kim JF, Bauer DW, Bogdanove AJ, Dong H, Beer SV, Wei Z. Secreted enigmatic proteins of erwinia amylovora - For good and evil Acta Horticulturae. 489: 371-375.  0.64
1998 Kim JF, Beer SV. HrpW of Erwinia amylovora, a new harpin that contains a domain homologous to pectate lyases of a distinct class. Journal of Bacteriology. 180: 5203-10. PMID 9748455  0.64
1998 Kim JF, Ham JH, Bauer DW, Collmer A, Beer SV. The hrpC and hrpN operons of Erwinia chrysanthemi EC16 are flanked by plcA and homologs of hemolysin/adhesin genes and accompanying activator/transporter genes. Molecular Plant-Microbe Interactions : Mpmi. 11: 563-7. PMID 9612954 DOI: 10.1094/MPMI.1998.11.6.563  0.64
1998 Bogdanove AJ, Kim JF, Wei Z, Kolchinsky P, Charkowski AO, Conlin AK, Collmer A, Beer SV. Homology and functional similarity of an hrp-linked pathogenicity locus, dspEF, of Erwinia amylovora and the avirulence locus avrE of Pseudomonas syringae pathovar tomato. Proceedings of the National Academy of Sciences of the United States of America. 95: 1325-30. PMID 9448330 DOI: 10.1073/pnas.95.3.1325  0.64
1998 Kim JF, Charkowski AO, Alfano JR, Collmer A, Beer SV. Sequences related to transposable elements and bacteriophages flank avirulence genes of Pseudomonas syringae Molecular Plant-Microbe Interactions. 11: 1247-1252.  0.64
1997 Kim JF, Wei ZM, Beer SV. The hrpA and hrpC operons of Erwinia amylovora encode components of a type III pathway that secretes harpin. Journal of Bacteriology. 179: 1690-7. PMID 9045830  0.64
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