Thomas Bataillon - Publications

Affiliations: 
Aarhus University, Aarhus, Denmark 

72 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Bataillon T, Gauthier P, Villesen P, Santoni S, Thompson JD, Ehlers BK. From genotype to phenotype: Genetic redundancy and the maintenance of an adaptive polymorphism in the context of high gene flow. Evolution Letters. 6: 189-202. PMID 35386834 DOI: 10.1002/evl3.277  0.381
2021 Chen J, Bataillon T, Glémin S, Lascoux M. What does the distribution of fitness effects of new mutations reflect? Insights from plants. The New Phytologist. PMID 34704271 DOI: 10.1111/nph.17826  0.324
2020 Muyle A, Martin H, Zemp N, Mollion M, Gallina S, Tavares R, Silva A, Bataillon T, Widmer A, Glémin S, Touzet P, Marais GAB. Dioecy is associated with high genetic diversity and adaptation rates in the plant genus Silene. Molecular Biology and Evolution. PMID 32926156 DOI: 10.1093/Molbev/Msaa229  0.471
2020 Tataru P, Bataillon T. polyDFE: Inferring the Distribution of Fitness Effects and Properties of Beneficial Mutations from Polymorphism Data. Methods in Molecular Biology (Clifton, N.J.). 2090: 125-146. PMID 31975166 DOI: 10.1007/978-1-0716-0199-0_6  0.418
2020 Hartfield M, Bataillon T. Selective Sweeps Under Dominance and Inbreeding. G3 (Bethesda, Md.). PMID 31974096 DOI: 10.1534/G3.119.400919  0.5
2019 Castellano D, Macià MC, Tataru P, Bataillon T, Munch K. Comparison of the Full Distribution of Fitness Effects of New Amino Acid Mutations Across Great Apes. Genetics. PMID 31488516 DOI: 10.1534/Genetics.119.302494  0.463
2019 Tataru P, Bataillon T. polyDFEv2.0: Testing for invariance of the distribution of fitness effects within and across species. Bioinformatics (Oxford, England). PMID 30615114 DOI: 10.1093/Bioinformatics/Bty1060  0.366
2019 Moutinho AF, Bataillon T, Dutheil JY. Variation of the adaptive substitution rate between species and within genomes Evolutionary Ecology. 34: 315-338. DOI: 10.1007/S10682-019-10026-Z  0.473
2018 Bailey SF, Guo Q, Bataillon T. Identifying drivers of parallel evolution: A regression model approach. Genome Biology and Evolution. PMID 30252076 DOI: 10.1093/Gbe/Evy210  0.486
2018 Fragata I, Matuszewski S, Schmitz MA, Bataillon T, Jensen JD, Bank C. The fitness landscape of the codon space across environments. Heredity. PMID 30127529 DOI: 10.1038/S41437-018-0125-7  0.424
2018 Rousselle M, Mollion M, Nabholz B, Bataillon T, Galtier N. Overestimation of the adaptive substitution rate in fluctuating populations. Biology Letters. 14. PMID 29743267 DOI: 10.1098/Rsbl.2018.0055  0.388
2017 Mollion M, Ehlers BK, Figuet E, Santoni S, Lenormand T, Maurice S, Galtier N, Bataillon T. Patterns of genome-wide nucleotide diversity in the gynodioecious plant Thymus vulgaris are compatible with recent sweeps of cytoplasmic genes. Genome Biology and Evolution. PMID 29272394 DOI: 10.1093/Gbe/Evx272  0.439
2017 Tataru P, Mollion M, Glémin S, Bataillon T. Inference of Distribution of Fitness Effects and Proportion of Adaptive Substitutions from Polymorphism Data. Genetics. PMID 28951530 DOI: 10.1534/Genetics.117.300323  0.429
2017 Hartfield M, Bataillon T, Glémin S. The Evolutionary Interplay between Adaptation and Self-Fertilization. Trends in Genetics : Tig. PMID 28495267 DOI: 10.1016/J.Tig.2017.04.002  0.422
2017 Starnawski P, Bataillon T, Ettema TJ, Jochum LM, Schreiber L, Chen X, Lever MA, Polz MF, Jørgensen BB, Schramm A, Kjeldsen KU. Microbial community assembly and evolution in subseafloor sediment. Proceedings of the National Academy of Sciences of the United States of America. PMID 28242677 DOI: 10.1073/Pnas.1614190114  0.353
2017 Tataru P, Simonsen M, Bataillon T, Hobolth A. Statistical Inference in the Wright-Fisher Model Using Allele Frequency Data. Systematic Biology. 66: e30-e46. PMID 28173553 DOI: 10.1093/Sysbio/Syw056  0.398
2016 Bailey SF, Blanquart F, Bataillon T, Kassen R. What drives parallel evolution?: How population size and mutational variation contribute to repeated evolution. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. PMID 27859467 DOI: 10.1002/Bies.201600176  0.492
2016 Jiménez-Mena B, Tataru P, Brøndum RF, Sahana G, Guldbrandtsen B, Bataillon T. One size fits all? Direct evidence for the heterogeneity of genetic drift throughout the genome. Biology Letters. 12. PMID 27405384 DOI: 10.1098/Rsbl.2016.0426  0.484
2016 Bataillon T, Galtier N, Bernard A, Cryer N, Faivre N, Santoni S, Severac D, Mikkelsen TN, Larsen KS, Beier C, Sørensen JG, Holmstrup M, Ehlers BK. A replicated climate change field experiment reveals rapid evolutionary response in an ecologically important soil invertebrate. Global Change Biology. PMID 27109012 DOI: 10.1111/Gcb.13293  0.331
2016 Blanquart F, Bataillon T. Epistasis and the Structure of Fitness Landscapes: Are Experimental Fitness Landscapes Compatible with Fisher's Geometric Model? Genetics. PMID 27052568 DOI: 10.1534/Genetics.115.182691  0.437
2016 Bailey SF, Bataillon T. Can the experimental evolution programme help us elucidate the genetic basis of adaptation in nature? Molecular Ecology. 25: 203-18. PMID 26346808 DOI: 10.1111/Mec.13378  0.435
2015 Tataru P, Bataillon T, Hobolth A. Inference Under a Wright-Fisher Model Using an Accurate Beta Approximation. Genetics. 201: 1133-41. PMID 26311474 DOI: 10.1534/Genetics.115.179606  0.336
2015 Bataillon T, Duan J, Hvilsom C, Jin X, Li Y, Skov L, Glemin S, Munch K, Jiang T, Qian Y, Hobolth A, Wang J, Mailund T, Siegismund HR, Schierup MH. Inference of purifying and positive selection in three subspecies of chimpanzees (Pan troglodytes) from exome sequencing. Genome Biology and Evolution. 7: 1122-32. PMID 25829516 DOI: 10.1093/Gbe/Evv058  0.42
2015 Lassalle F, Périan S, Bataillon T, Nesme X, Duret L, Daubin V. GC-Content evolution in bacterial genomes: the biased gene conversion hypothesis expands. Plos Genetics. 11: e1004941. PMID 25659072 DOI: 10.1371/Journal.Pgen.1004941  0.437
2015 Jiménez-Mena B, Hospital F, Bataillon T. Heterogeneity in effective population size and its implications in conservation genetics and animal breeding Conservation Genetics Resources. 8: 35-41. DOI: 10.1007/S12686-015-0508-5  0.465
2014 Blanquart F, Achaz G, Bataillon T, Tenaillon O. Properties of selected mutations and genotypic landscapes under Fisher's geometric model. Evolution; International Journal of Organic Evolution. 68: 3537-54. PMID 25311558 DOI: 10.1111/Evo.12545  0.443
2014 Bataillon T, Bailey SF. Effects of new mutations on fitness: insights from models and data. Annals of the New York Academy of Sciences. 1320: 76-92. PMID 24891070 DOI: 10.1111/Nyas.12460  0.451
2014 Perfeito L, Sousa A, Bataillon T, Gordo I. Rates of fitness decline and rebound suggest pervasive epistasis. Evolution; International Journal of Organic Evolution. 68: 150-62. PMID 24372601 DOI: 10.1111/Evo.12234  0.48
2013 Paape T, Bataillon T, Zhou P, J Y Kono T, Briskine R, Young ND, Tiffin P. Selection, genome-wide fitness effects and evolutionary rates in the model legume Medicago truncatula. Molecular Ecology. 22: 3525-38. PMID 23773281 DOI: 10.1111/Mec.12329  0.416
2013 Bataillon T, Joyce P, Sniegowski P. As it happens: current directions in experimental evolution. Biology Letters. 9: 20120945. PMID 23118431 DOI: 10.1098/Rsbl.2012.0945  0.403
2012 Stukenbrock EH, Bataillon T. A population genomics perspective on the emergence and adaptation of new plant pathogens in agro-ecosystems. Plos Pathogens. 8: e1002893. PMID 23028308 DOI: 10.1371/Journal.Ppat.1002893  0.407
2012 Ho-Huu J, Ronfort J, De Mita S, Bataillon T, Hochu I, Weber A, Chantret N. Contrasted patterns of selective pressure in three recent paralogous gene pairs in the Medicago genus (L.). Bmc Evolutionary Biology. 12: 195. PMID 23025552 DOI: 10.1186/1471-2148-12-195  0.365
2012 Ehlers BK, Grøndahl E, Ronfort J, Bataillon T. "Ménage à trois": the presence/absence of thyme shapes the mutualistic interaction between the host plant Medicago truncatula (Fabaceae) and its symbiotic bacterium Sinorhizobium meliloti. Ecology and Evolution. 2: 1676-81. PMID 22957171 DOI: 10.1002/Ece3.270  0.312
2012 Kjeldsen KU, Bataillon T, Pinel N, De Mita S, Lund MB, Panitz F, Bendixen C, Stahl DA, Schramm A. Purifying selection and molecular adaptation in the genome of Verminephrobacter, the heritable symbiotic bacteria of earthworms. Genome Biology and Evolution. 4: 307-15. PMID 22333491 DOI: 10.1093/Gbe/Evs014  0.396
2012 Hvilsom C, Qian Y, Bataillon T, Li Y, Mailund T, Sallé B, Carlsen F, Li R, Zheng H, Jiang T, Jiang H, Jin X, Munch K, Hobolth A, Siegismund HR, et al. Extensive X-linked adaptive evolution in central chimpanzees. Proceedings of the National Academy of Sciences of the United States of America. 109: 2054-9. PMID 22308321 DOI: 10.1073/Pnas.1106877109  0.36
2011 Stukenbrock EH, Bataillon T, Dutheil JY, Hansen TT, Li R, Zala M, McDonald BA, Wang J, Schierup MH. The making of a new pathogen: insights from comparative population genomics of the domesticated wheat pathogen Mycosphaerella graminicola and its wild sister species. Genome Research. 21: 2157-66. PMID 21994252 DOI: 10.1101/Gr.118851.110  0.449
2011 Branca A, Paape TD, Zhou P, Briskine R, Farmer AD, Mudge J, Bharti AK, Woodward JE, May GD, Gentzbittel L, Ben C, Denny R, Sadowsky MJ, Ronfort J, Bataillon T, et al. Whole-genome nucleotide diversity, recombination, and linkage disequilibrium in the model legume Medicago truncatula. Proceedings of the National Academy of Sciences of the United States of America. 108: E864-70. PMID 21949378 DOI: 10.1073/Pnas.1104032108  0.47
2011 Slotte T, Bataillon T, Hansen TT, St Onge K, Wright SI, Schierup MH. Genomic determinants of protein evolution and polymorphism in Arabidopsis. Genome Biology and Evolution. 3: 1210-9. PMID 21926095 DOI: 10.1093/Gbe/Evr094  0.597
2011 Bataillon T, Zhang T, Kassen R. Cost of adaptation and fitness effects of beneficial mutations in Pseudomonas fluorescens. Genetics. 189: 939-49. PMID 21868607 DOI: 10.1534/Genetics.111.130468  0.411
2011 De Mita S, Chantret N, Loridon K, Ronfort J, Bataillon T. Molecular adaptation in flowering and symbiotic recognition pathways: insights from patterns of polymorphism in the legume Medicago truncatula. Bmc Evolutionary Biology. 11: 229. PMID 21806823 DOI: 10.1186/1471-2148-11-229  0.387
2011 Grivet D, Sebastiani F, Alía R, Bataillon T, Torre S, Zabal-Aguirre M, Vendramin GG, González-Martínez SC. Molecular footprints of local adaptation in two Mediterranean conifers. Molecular Biology and Evolution. 28: 101-16. PMID 20656795 DOI: 10.1093/Molbev/Msq190  0.4
2010 Sjödin P, Bataillon T, Schierup MH. Insertion and deletion processes in recent human history. Plos One. 5: e8650. PMID 20098729 DOI: 10.1371/Journal.Pone.0008650  0.365
2009 Schoustra SE, Bataillon T, Gifford DR, Kassen R. The properties of adaptive walks in evolving populations of fungus. Plos Biology. 7: e1000250. PMID 19956798 DOI: 10.1371/Journal.Pbio.1000250  0.444
2009 Glémin S, Bataillon T. A comparative view of the evolution of grasses under domestication. The New Phytologist. 183: 273-90. PMID 19515223 DOI: 10.1111/J.1469-8137.2009.02884.X  0.423
2007 De Mita S, Ronfort J, McKhann HI, Poncet C, El Malki R, Bataillon T. Investigation of the demographic and selective forces shaping the nucleotide diversity of genes involved in nod factor signaling in Medicago truncatula. Genetics. 177: 2123-33. PMID 18073426 DOI: 10.1534/Genetics.107.076943  0.416
2007 De Mita S, Santoni S, Ronfort J, Bataillon T. Adaptive evolution of the symbiotic gene NORK is not correlated with shifts of rhizobial specificity in the genus Medicago. Bmc Evolutionary Biology. 7: 210. PMID 17986323 DOI: 10.1186/1471-2148-7-210  0.322
2007 Haudry A, Cenci A, Ravel C, Bataillon T, Brunel D, Poncet C, Hochu I, Poirier S, Santoni S, Glémin S, David J. Grinding up wheat: a massive loss of nucleotide diversity since domestication. Molecular Biology and Evolution. 24: 1506-17. PMID 17443011 DOI: 10.1093/Molbev/Msm077  0.462
2007 Ehlers BK, Bataillon T. 'Inconstant males' and the maintenance of labile sex expression in subdioecious plants. The New Phytologist. 174: 194-211. PMID 17335509 DOI: 10.1111/J.1469-8137.2007.01975.X  0.343
2006 Ronfort J, Bataillon T, Santoni S, Delalande M, David JL, Prosperi JM. Microsatellite diversity and broad scale geographic structure in a model legume: building a set of nested core collection for studying naturally occurring variation in Medicago truncatula. Bmc Plant Biology. 6: 28. PMID 17166278 DOI: 10.1186/1471-2229-6-28  0.431
2006 Glémin S, Vimond L, Ronfort J, Bataillon T, Mignot A. Marker-based investigation of inbreeding depression in the endangered species Brassica insularis. Heredity. 97: 304-11. PMID 16850037 DOI: 10.1038/Sj.Hdy.6800870  0.319
2006 Bataillon T, Mailund T, Thorlacius S, Steingrimsson E, Rafnar T, Halldorsson MM, Calian V, Schierup MH. The effective size of the Icelandic population and the prospects for LD mapping: inference from unphased microsatellite markers. European Journal of Human Genetics : Ejhg. 14: 1044-53. PMID 16736029 DOI: 10.1038/Sj.Ejhg.5201669  0.378
2006 Ostrowski MF, David J, Santoni S, McKhann H, Reboud X, Le Corre V, Camilleri C, Brunel D, Bouchez D, Faure B, Bataillon T. Evidence for a large-scale population structure among accessions of Arabidopsis thaliana: possible causes and consequences for the distribution of linkage disequilibrium. Molecular Ecology. 15: 1507-17. PMID 16629807 DOI: 10.1111/J.1365-294X.2006.02865.X  0.396
2006 Kassen R, Bataillon T. Distribution of fitness effects among beneficial mutations before selection in experimental populations of bacteria. Nature Genetics. 38: 484-8. PMID 16550173 DOI: 10.1038/Ng1751  0.449
2006 De Mita S, Santoni S, Hochu I, Ronfort J, Bataillon T. Molecular evolution and positive selection of the symbiotic gene NORK in Medicago truncatula. Journal of Molecular Evolution. 62: 234-44. PMID 16474986 DOI: 10.1007/S00239-004-0367-2  0.392
2005 Ehlers BK, Maurice S, Bataillon T. Sex inheritance in gynodioecious species: a polygenic view. Proceedings. Biological Sciences. 272: 1795-802. PMID 16096091 DOI: 10.1098/Rspb.2005.3168  0.369
2005 Thuillet AC, Bataillon T, Poirier S, Santoni S, David JL. Estimation of long-term effective population sizes through the history of durum wheat using microsatellite data. Genetics. 169: 1589-99. PMID 15545658 DOI: 10.1534/Genetics.104.029553  0.386
2004 Goldringer I, Bataillon T. On the distribution of temporal variations in allele frequency: consequences for the estimation of effective population size and the detection of loci undergoing selection. Genetics. 168: 563-8. PMID 15454567 DOI: 10.1534/Genetics.103.025908  0.415
2004 Bechsgaard J, Bataillon T, Schierup MH. Uneven segregation of sporophytic self-incompatibility alleles in Arabidopsis lyrata. Journal of Evolutionary Biology. 17: 554-61. PMID 15149398 DOI: 10.1111/J.1420-9101.2004.00699.X  0.413
2004 McKhann HI, Camilleri C, Bérard A, Bataillon T, David JL, Reboud X, Le Corre V, Caloustian C, Gut IG, Brunel D. Nested core collections maximizing genetic diversity in Arabidopsis thaliana. The Plant Journal : For Cell and Molecular Biology. 38: 193-202. PMID 15053772 DOI: 10.1111/J.1365-313X.2004.02034.X  0.44
2004 Thuillet AC, Bataillon T, Sourdille P, David JL. Factors affecting polymorphism at microsatellite loci in bread wheat [ Triticum aestivum (L.) Thell]: effects of mutation processes and physical distance from the centromere. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 108: 368-77. PMID 14564392 DOI: 10.1007/S00122-003-1443-5  0.434
2003 Glémin S, Ronfort J, Bataillon T. Patterns of inbreeding depression and architecture of the load in subdivided populations. Genetics. 165: 2193-212. PMID 14704197  0.305
2003 Bataillon T. Shaking the ‘deleterious mutations’ dogma? Trends in Ecology & Evolution. 18: 315-317. DOI: 10.1016/S0169-5347(03)00128-9  0.408
2002 Thuillet AC, Bru D, David J, Roumet P, Santoni S, Sourdille P, Bataillon T. Direct estimation of mutation rate for 10 microsatellite loci in durum wheat, Triticum turgidum (L.) Thell. ssp durum desf. Molecular Biology and Evolution. 19: 122-5. PMID 11752198 DOI: 10.1093/Oxfordjournals.Molbev.A003977  0.348
2002 Bataillon T. Plant Genetic Resources of Legumes in the Mediterranean Plant Science. 162: 851. DOI: 10.1016/S0168-9452(02)00019-5  0.336
2001 Gouesnard B, Bataillon TM, Decoux G, Rozale C, Schoen DJ, David JL. MSTRAT: an algorithm for building germ plasm core collections by maximizing allelic or phenotypic richness. The Journal of Heredity. 92: 93-4. PMID 11336240 DOI: 10.1093/Jhered/92.1.93  0.534
2000 Bataillon T. Estimation of spontaneous genome-wide mutation rate parameters: whither beneficial mutations? Heredity. 497-501. PMID 10849074 DOI: 10.1046/J.1365-2540.2000.00727.X  0.385
2000 Bataillon T, Kirkpatrick M. Inbreeding depression due to mildly deleterious mutations in finite populations: Size does matter Genetical Research. 75: 75-81. PMID 10740923 DOI: 10.1017/S0016672399004048  0.394
1999 Kirkpatrick M, Bataillon T. Artificial selection on phenotypically plastic traits Genetical Research. 74: 265-270. PMID 10689803 DOI: 10.1017/S0016672399004115  0.391
1998 Schoen DJ, David JL, Bataillon TM. Deleterious mutation accumulation and the regeneration of genetic resources. Proceedings of the National Academy of Sciences of the United States of America. 95: 394-9. PMID 9419386 DOI: 10.1073/Pnas.95.1.394  0.625
1997 Morgan MT, Schoen DJ, Bataillon TM. The evolution of self-fertilization in perennials. The American Naturalist. 150: 618-38. PMID 18811304 DOI: 10.1086/286085  0.649
1996 Bataillon TM, David JL, Schoen DJ. Neutral genetic markers and conservation genetics: simulated germplasm collections. Genetics. 144: 409-17. PMID 8878704  0.606
1996 Schoen DJ, Morgan MT, Bataillon T. How Does Self-Pollination Evolve ? Inferences From Floral Ecology And Molecular Genetic Variation Philosophical Transactions of the Royal Society B. 351: 1281-1290. DOI: 10.1098/Rstb.1996.0111  0.648
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