Joel A. Klappenbach, Ph.D. - Publications

Affiliations: 
2001 Michigan State University, East Lansing, MI 
Area:
Microbiology Biology, Molecular Biology

13 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Kumar N, Peterson VM, Zhang KX, Li L, Garrett-Engele PW, Moniz RJ, Klappenbach JA. Abstract LB-012: Single cell RNA-sequencing of multiple myeloma clinical patients for identifying novel immuno-oncology drug targets Cancer Research. 78. DOI: 10.1158/1538-7445.Am2018-Lb-012  0.329
2017 Peterson VM, Zhang KX, Kumar N, Wong J, Li L, Wilson DC, Moore R, McClanahan TK, Sadekova S, Klappenbach JA. Multiplexed quantification of proteins and transcripts in single cells. Nature Biotechnology. PMID 28854175 DOI: 10.1038/Nbt.3973  0.318
2015 Bai J, Smock SL, Jackson GR, MacIsaac KD, Huang Y, Mankus C, Oldach J, Roberts B, Ma YL, Klappenbach JA, Crackower MA, Alves SE, Hayden PJ. Phenotypic responses of differentiated asthmatic human airway epithelial cultures to rhinovirus. Plos One. 10: e0118286. PMID 25706956 DOI: 10.1371/Journal.Pone.0118286  0.337
2011 Caro-Quintero A, Deng J, Auchtung J, Brettar I, Höfle MG, Klappenbach J, Konstantinidis KT. Unprecedented levels of horizontal gene transfer among spatially co-occurring Shewanella bacteria from the Baltic Sea. The Isme Journal. 5: 131-40. PMID 20596068 DOI: 10.1038/Ismej.2010.93  0.367
2010 Ayala-del-Río HL, Chain PS, Grzymski JJ, Ponder MA, Ivanova N, Bergholz PW, Di Bartolo G, Hauser L, Land M, Bakermans C, Rodrigues D, Klappenbach J, Zarka D, Larimer F, Richardson P, et al. The genome sequence of Psychrobacter arcticus 273-4, a psychroactive Siberian permafrost bacterium, reveals mechanisms for adaptation to low-temperature growth. Applied and Environmental Microbiology. 76: 2304-12. PMID 20154119 DOI: 10.1128/Aem.02101-09  0.313
2010 Blackman SC, Podtelezhnikov A, Railkar RA, Loboda A, Tanis K, Klappenbach JA, Watters J, Iannone R, Herman G, Bergstrom DA. Abstract 26: Notch pathway inhibition with MK-0752 leads to dose- and time-dependent transcriptional alterations in proliferation, PI3K, andWntpathway genes in plucked human hair follicles Cancer Research. 70: 26-26. DOI: 10.1158/1538-7445.Am10-26  0.352
2009 Blackman SC, Klappenbach JA, Railkar RA, Tanis K, Podtelezhnikov A, Loboda A, Dai X, Hing J, Stone J, Harman A, Hardwick J, Iannone R, Bergstrom D. Abstract B41: Identification of a time‐ and dose‐responsive transcriptional signature of Notch pathway inhibition in plucked human hair follicles following exposure to the gamma‐secretase inhibitor MK‐0752 Molecular Cancer Therapeutics. 8. DOI: 10.1158/1535-7163.Targ-09-B41  0.355
2007 Goris J, Konstantinidis KT, Klappenbach JA, Coenye T, Vandamme P, Tiedje JM. DNA-DNA hybridization values and their relationship to whole-genome sequence similarities. International Journal of Systematic and Evolutionary Microbiology. 57: 81-91. PMID 17220447 DOI: 10.1099/Ijs.0.64483-0  0.306
2007 Stedtfeld RD, Wick LM, Baushke SW, Tourlousse DM, Herzog AB, Xia Y, Rouillard JM, Klappenbach JA, Cole JR, Gulari E, Tiedje JM, Hashsham SA. Influence of dangling ends and surface-proximal tails of targets on probe-target duplex formation in 16S rRNA gene-based diagnostic arrays. Applied and Environmental Microbiology. 73: 380-9. PMID 17114322 DOI: 10.1128/Aem.01785-06  0.316
2005 Beliaev AS, Klingeman DM, Klappenbach JA, Wu L, Romine MF, Tiedje JM, Nealson KH, Fredrickson JK, Zhou J. Global transcriptome analysis of Shewanella oneidensis MR-1 exposed to different terminal electron acceptors. Journal of Bacteriology. 187: 7138-45. PMID 16199584 DOI: 10.1128/Jb.187.20.7138-7145.2005  0.31
2005 Kolker E, Picone AF, Galperin MY, Romine MF, Higdon R, Makarova KS, Kolker N, Anderson GA, Qiu X, Auberry KJ, Babnigg G, Beliaev AS, Edlefsen P, Elias DA, Gorby YA, ... ... Klappenbach JA, et al. Global profiling of Shewanella oneidensis MR-1: expression of hypothetical genes and improved functional annotations. Proceedings of the National Academy of Sciences of the United States of America. 102: 2099-104. PMID 15684069 DOI: 10.1073/Pnas.0409111102  0.387
2001 Klappenbach JA, Saxman PR, Cole JR, Schmidt TM. rrndb: the Ribosomal RNA Operon Copy Number Database. Nucleic Acids Research. 29: 181-4. PMID 11125085 DOI: 10.1093/Nar/29.1.181  0.392
2000 Klappenbach JA, Dunbar JM, Schmidt TM. rRNA operon copy number reflects ecological strategies of bacteria. Applied and Environmental Microbiology. 66: 1328-33. PMID 10742207 DOI: 10.1128/Aem.66.4.1328-1333.2000  0.445
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