Dana A. Opulente - Related publications

Affiliations: 
Genetics University of Wisconsin, Madison, Madison, WI 
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Shan Y, Pei X, Yong S, Li J, Qin Q, Zeng S, Yu J. Analysis of the complete chloroplast genomes of and (Lamiaceae). Mitochondrial Dna. Part B, Resources. 6: 2672-2680. PMID 34435116 DOI: 10.1080/23802359.2021.1920491   
2021 Dong NL, Wang W, Wang Z, Zhang YY, Shao YZ, Sun HZ. Characterization of the complete plastid genome of (Pinaceae) from southwest China. Mitochondrial Dna. Part B, Resources. 6: 2772-2774. PMID 34471700 DOI: 10.1080/23802359.2021.1969699   
2021 Huang CH, Chen CC, Lin YC, Chen CH, Lee AY, Liou JS, Gu CT, Huang L. The Gene as a Genome-Wide Taxonomic Marker for High Resolution Discrimination of and Its Closely Related Taxa. Microorganisms. 9. PMID 34442649 DOI: 10.3390/microorganisms9081570   
2021 Alzahrani D, Albokhari E, Yaradua S, Abba A. Complete chloroplast genome sequences of and and other Cleomaceae Species, comparative analysis and phylogenetic relationships. Saudi Journal of Biological Sciences. 28: 2476-2490. PMID 33911961 DOI: 10.1016/j.sjbs.2021.01.049   
2021 Yao X, Meng X, Meng F, Zhang J, Wu J, Guo X, Xing S. The complete chloroplast genome sequence of Levl. (Buxaceae Dumort.). Mitochondrial Dna. Part B, Resources. 6: 2695-2696. PMID 34447883 DOI: 10.1080/23802359.2021.1966332   
2021 Leão C, Clemente L, Moura L, Seyfarth AM, Hansen IM, Hendriksen RS, Amaro A. Emergence and Clonal Spread of CTX-M-65-Producing From Retail Meat in Portugal. Frontiers in Microbiology. 12: 653595. PMID 34354678 DOI: 10.3389/fmicb.2021.653595   
2021 Qin X, Wang H, Miao C, Yang X, Zhang Y, Feng J, Forsythe SJ, Man C, Jiang Y. Comparative genomics reveals environmental adaptation differences between Cronobacter species. Food Research International (Ottawa, Ont.). 147: 110541. PMID 34399518 DOI: 10.1016/j.foodres.2021.110541   
2021 Li Y, Liu H, Zou J. Complete chloroplast genome of : a species endemic to Guizhou, China. Mitochondrial Dna. Part B, Resources. 6: 2596-2598. PMID 34395889 DOI: 10.1080/23802359.2021.1961625   
2021 Rangel LT, Soucy SM, Setubal JC, Gogarten JP, Fournier GP. An efficient, non-phylogenetic method for detecting genes sharing evolutionary signals in phylogenomic datasets. Genome Biology and Evolution. PMID 34390574 DOI: 10.1093/gbe/evab187   
2021 Li J, Xu Y, Shan Y, Pei X, Yong S, Liu C, Yu J. Assembly of the complete mitochondrial genome of an endemic plant, Scutellaria tsinyunensis, revealed the existence of two conformations generated by a repeat-mediated recombination. Planta. 254: 36. PMID 34302538 DOI: 10.1007/s00425-021-03684-3   
2021 Kamal SM, Simpson DJ, Wang Z, Gänzle M, Römling U. Horizontal Transmission of Stress Resistance Genes Shape the Ecology of Beta- and Gamma-Proteobacteria. Frontiers in Microbiology. 12: 696522. PMID 34295324 DOI: 10.3389/fmicb.2021.696522   
2021 Gan J, Li Y, Wan Y, Li J, Zhang B. The complete mitochondrial genome sequence of (Anura: Ranidae). Mitochondrial Dna. Part B, Resources. 6: 2418-2419. PMID 34350353 DOI: 10.1080/23802359.2021.1920502   
2021 Guo Y, Wariss HM, Zhang R. The complete chloroplast genome of (L.) Goldblatt & J. C. Manning (Leguminosae), an important medicinal plant species from Southern Africa. Mitochondrial Dna. Part B, Resources. 6: 2767-2769. PMID 34471699 DOI: 10.1080/23802359.2021.1967811   
2021 Ju X, Shi G, Chen S, Dai W, He T. Characterization and phylogenetic analysis of the complete chloroplast genome of (Liliaceae). Mitochondrial Dna. Part B, Resources. 6: 2750-2751. PMID 34471694 DOI: 10.1080/23802359.2021.1967799   
2021 Yates TB, Feng K, Zhang J, Singan V, Jawdy SS, Gunter LE, Ranjan P, Abraham PE, Barry K, Lipzen A, Pan C, Schmutz J, Chen JG, Tuskan GA, Muchero W. The ancient Salicoid genome duplication event: A platform for reconstruction of de Novo gene evolution in Populus trichocarpa. Genome Biology and Evolution. PMID 34469536 DOI: 10.1093/gbe/evab198   
2021 Li G, Zhang L, Xue P. Codon usage pattern and genetic diversity in chloroplast genomes of Panicum species. Gene. 145866. PMID 34352297 DOI: 10.1016/j.gene.2021.145866   
2021 Chacón-Vargas K, McCarthy CO, Choi D, Wang L, Yu JH, Gibbons JG. Comparison of Two Genomes From Different Clades Reveals Independent Evolution of Alpha-Amylase Duplication, Variation in Secondary Metabolism Genes, and Differences in Primary Metabolism. Frontiers in Microbiology. 12: 691296. PMID 34326825 DOI: 10.3389/fmicb.2021.691296   
2021 Girard L, Lood C, Höfte M, Vandamme P, Rokni-Zadeh H, van Noort V, Lavigne R, De Mot R. The Ever-Expanding Genus: Description of 43 New Species and Partition of the Group. Microorganisms. 9. PMID 34442845 DOI: 10.3390/microorganisms9081766   
2021 Simonsen AK. Environmental stress leads to genome streamlining in a widely distributed species of soil bacteria. The Isme Journal. PMID 34408268 DOI: 10.1038/s41396-021-01082-x   
2021 Agarwal G, Choudhary D, Stice SP, Myers BK, Gitaitis RD, Venter SN, Kvitko BH, Dutta B. Pan-Genome-Wide Analysis of Identified Genes Linked to Pathogenicity in Onion. Frontiers in Microbiology. 12: 684756. PMID 34489883 DOI: 10.3389/fmicb.2021.684756   
2021 Zhou J, Jiao Z, Guo J, Wang BS, Zheng J. Complete chloroplast genome sequencing of five species and its application in the phylogeny and taxonomy of the genus. Mitochondrial Dna. Part B, Resources. 6: 2348-2352. PMID 34345693 DOI: 10.1080/23802359.2021.1950055   
2021 Fang Y, Jiang J, Du Q, Luo L, Li X, Xie X. Cytochrome P450 Superfamily: Evolutionary and Functional Divergence in Sorghum () Stress Resistance. Journal of Agricultural and Food Chemistry. PMID 34495670 DOI: 10.1021/acs.jafc.1c03701   
2021 Zhang X, Liu T, Wang J, Wang P, Qiu Y, Zhao W, Pang S, Li X, Wang H, Song J, Zhang W, Yang W, Sun Y, Li X. Pan-genome of Raphanus highlights genetic variation and introgression among domesticated, wild and weedy radishes. Molecular Plant. PMID 34384905 DOI: 10.1016/j.molp.2021.08.005   
2021 Kuzmin E, Taylor JS, Boone C. Retention of duplicated genes in evolution. Trends in Genetics : Tig. PMID 34294428 DOI: 10.1016/j.tig.2021.06.016   
2021 Senkevich TG, Yutin N, Wolf YI, Koonin EV, Moss B. Ancient Gene Capture and Recent Gene Loss Shape the Evolution of Orthopoxvirus-Host Interaction Genes. Mbio. e0149521. PMID 34253028 DOI: 10.1128/mBio.01495-21   
2021 Zhang X, Sun Y, Landis JB, Shen J, Zhang H, Kuang T, Sun W, Sun J, Tiamiyu BB, Deng T, Sun H, Wang H. Transcriptomes of (Asteraceae) Provide Insights into High-Altitude Adaptation. Plants (Basel, Switzerland). 10. PMID 34451759 DOI: 10.3390/plants10081715   
2021 Zhang C, Zhang S, Tian Z, Cheng S, Wang D, Xu S. The complete mitochondrial genome of Chinese minnow () and its phylogenetic analyses. Mitochondrial Dna. Part B, Resources. 6: 2177-2179. PMID 34286081 DOI: 10.1080/23802359.2021.1875921   
2021 Zhang C, Zhang S, Tian Z, Cheng S, Wang D, Xu S. The complete mitochondrial genome of Chinese minnow () and its phylogenetic analyses. Mitochondrial Dna. Part B, Resources. 6: 2177-2179. PMID 34286081 DOI: 10.1080/23802359.2021.1875921   
2021 He Z, Chen Y, Cui Z, Zhang M, Zhao Y, Liu F, Chen N. Complete mitochondrial genome of the harmful algal bloom species (Bacillariophyceae, Bacillariophyta). Mitochondrial Dna. Part B, Resources. 6: 2541-2543. PMID 34377823 DOI: 10.1080/23802359.2021.1959441   
2021 Yang K, Fan M, Sun Y, Liu Q, Gao H. The complete chloroplast genome of the subtropical species 'Huaheling'. Mitochondrial Dna. Part B, Resources. 6: 2385-2386. PMID 34345703 DOI: 10.1080/23802359.2021.1948362   
2021 Jiang X, Huang WJ, Li YR, Si J, Xu JD, Qin ED, Yang TG, Liu H, Wu ZH, Jiao PP. The complete chloroplast genome of Shap. (Leguminosae). Mitochondrial Dna. Part B, Resources. 6: 2128-2130. PMID 34263034 DOI: 10.1080/23802359.2021.1944366   
2021 Jiang X, Huang WJ, Li YR, Si J, Xu JD, Qin ED, Yang TG, Liu H, Wu ZH, Jiao PP. The complete chloroplast genome of Shap. (Leguminosae). Mitochondrial Dna. Part B, Resources. 6: 2128-2130. PMID 34263034 DOI: 10.1080/23802359.2021.1944366   
2021 Wu X, Wang X, Shang Y, Sun G, Wei Q, Zhang H. Complete mitochondrial genome sequence and phylogenetic analysis of (Stylommatophora: Arionidae). Mitochondrial Dna. Part B, Resources. 6: 2928-2930. PMID 34532588 DOI: 10.1080/23802359.2021.1972862   
2021 Gao Y, Yin S, Zhu L. The mitochondrial genome of the yellow-vented flowerpecker, (Dicaeidae) from southwestern China. Mitochondrial Dna. Part B, Resources. 6: 2860-2862. PMID 34514155 DOI: 10.1080/23802359.2021.1972483   
2021 Zhang F, Wang N, Cheng G, Shu X, Wang T, Zhuang W, Lu R, Wang Z. Comparative Chloroplast Genomes of Four Species (Amaryllidaceae) Provides New Insight into Interspecific Relationship and Phylogeny. Biology. 10. PMID 34439948 DOI: 10.3390/biology10080715   
2021 Hao J, Liang Y, Zhu M, Ping J, Feng P, Su Y, Wang T. The complete chloroplast genome of L. (Ophioglossaceae) and phylogenetic analysis. Mitochondrial Dna. Part B, Resources. 6: 2730-2731. PMID 34447885 DOI: 10.1080/23802359.2021.1966333   
2021 Yan WJ, Yang TG, Qin ED, Qu WR, Wu ZH, Jiao PP, Liu H. Complete plastid genome sequence of (Leguminosae). Mitochondrial Dna. Part B, Resources. 6: 2415-2417. PMID 34350352 DOI: 10.1080/23802359.2021.1920501   
2021 Tu JL, Bai XY, Xu YL, Li N, Xu JW. Targeted gene insertion and replacement in the basidiomycete by inactivation of non-homologous end joining using CRISPR/Cas9. Applied and Environmental Microbiology. AEM0151021. PMID 34524900 DOI: 10.1128/AEM.01510-21   
2021 Zhang Y, Deng C, Yang J, Wang D, Deng G. The complete chloroplast genome of a medicinal plant Burm.f. (Loranthaceae). Mitochondrial Dna. Part B, Resources. 6: 2635-2637. PMID 34435106 DOI: 10.1080/23802359.2021.1962760   
2021 Gonzalez-Ibeas D, Ibanez V, Perez-Roman E, Borredá C, Terol J, Talon M. Shaping the biology of citrus: I. Genomic determinants of evolution. The Plant Genome. e20104. PMID 34275210 DOI: 10.1002/tpg2.20104   
2021 Zhang X, He C, Zong D. The complete mitochondrial genome of var. . Mitochondrial Dna. Part B, Resources. 6: 2858-2859. PMID 34514154 DOI: 10.1080/23802359.2021.1972480   
2021 Kesawat MS, Kherawat BS, Singh A, Dey P, Kabi M, Debnath D, Saha D, Khandual A, Rout S, Manorama, Ali A, Palem RR, Gupta R, Kadam AA, Kim HU, et al. Genome-Wide Identification and Characterization of the Brassinazole-resistant () Gene Family and Its Expression in the Various Developmental Stage and Stress Conditions in Wheat ( L.). International Journal of Molecular Sciences. 22. PMID 34445448 DOI: 10.3390/ijms22168743   
2021 Zhang Q, Zhang D. Complete chloroplast genome sequence of medicinal plant Treviranus (Rosaceae) from Yunnan, China. Mitochondrial Dna. Part B, Resources. 6: 2422-2424. PMID 34350355 DOI: 10.1080/23802359.2021.1951137   
2021 Qiu Z, Zhu Y, Du Z, Bao P. The complete chloroplast genome sequence of the mangrove associate species . Mitochondrial Dna. Part B, Resources. 6: 2376-2378. PMID 34345700 DOI: 10.1080/23802359.2021.1925171   
2021 Deng S, Cai X, Kanu UC, Yuan S, Jin K, Shen Z. The complete mitogenome of (Cypriniformes: Gastromyzontidae) and phylogenetic implications. Mitochondrial Dna. Part B, Resources. 6: 2452-2454. PMID 34368444 DOI: 10.1080/23802359.2021.1955770   
2021 An Q, Fu C. Complete mitochondrial genome of (Cypriniformes: Gobionidae). Mitochondrial Dna. Part B, Resources. 6: 2227-2228. PMID 34377793 DOI: 10.1080/23802359.2021.1944385   
2021 Chen X, Sun Y, Zhao H, Hu J, Chen B, Li H, Huang W. Complete mitochondrial genome of a tropical sea cucumber, . Mitochondrial Dna. Part B, Resources. 6: 2788-2790. PMID 34514127 DOI: 10.1080/23802359.2021.1967218   
2021 Fang X, Zhang S. The complete chloroplast genome sequence of (Hochst.) Steane & Mabb., a traditional medicinal plant. Mitochondrial Dna. Part B, Resources. 6: 2699-2700. PMID 34435124 DOI: 10.1080/23802359.2021.1966340   
2021 Pang J, Hu W, Wang W, Li J, Mao K. The complete chloroplast genome of , a Critically Endangered species in New Caledonia. Mitochondrial Dna. Part B, Resources. 6: 2648-2649. PMID 34409167 DOI: 10.1080/23802359.2021.1964399   
2021 Song YF, Ye Q, Li M, Chen J, Yi XG, Wang XR, Wang SJ. The complete plastid genome of cherry plants (Rosaceae) and its phylogenetic implication. Mitochondrial Dna. Part B, Resources. 6: 2681-2682. PMID 34435117 DOI: 10.1080/23802359.2021.1935355