Stuart A. Kauffman - Publications

Affiliations: 
Biochemistry University of Calgary, Calgary, Alberta, Canada 
Area:
origin of life and molecular organization
Website:
http://edge.org/memberbio/stuart_a_kauffman

143 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Zhou JX, Isik Z, Xiao C, Rubin I, Kauffman SA, Schroeder M, Huang S. Systematic drug perturbations on cancer cells reveal diverse exit paths from proliferative state. Oncotarget. PMID 26871731 DOI: 10.18632/Oncotarget.7294  1
2015 Nghe P, Hordijk W, Kauffman SA, Walker SI, Schmidt FJ, Kemble H, Yeates JA, Lehman N. Prebiotic network evolution: six key parameters. Molecular Biosystems. 11: 3206-17. PMID 26490759 DOI: 10.1039/C5Mb00593K  1
2015 Kauffman SA, Gare A. Beyond Descartes and Newton: Recovering life and humanity. Progress in Biophysics and Molecular Biology. PMID 26143598 DOI: 10.1016/J.Pbiomolbio.2015.06.003  1
2015 Koppl R, Kauffman S, Felin T, Longo G. Economics for a creative world: A response to comments Journal of Institutional Economics. 11: 61-68. DOI: 10.1017/S1744137414000514  1
2014 Goldberg R, Kauffman S, Topol EJ. Study design and the drug development process Jama - Journal of the American Medical Association. 311: 2023. PMID 24846044 DOI: 10.1001/jama.2014.3826  1
2014 Kauffman SA. Prolegomenon to patterns in evolution. Bio Systems. 123: 3-8. PMID 24704211 DOI: 10.1016/J.Biosystems.2014.03.004  1
2014 Vattay G, Kauffman S, Niiranen S. Quantum biology on the edge of quantum chaos Plos One. 9. PMID 24603620 DOI: 10.1371/Journal.Pone.0089017  1
2014 Felin T, Kauffman S, Koppl R, Longo G. Economic opportunity and evolution: Beyond landscapes and bounded rationality Strategic Entrepreneurship Journal. 8: 269-282. DOI: 10.2139/Ssrn.2197512  1
2014 Kauffman S. On ethical and intellectual failures in contemporary economics Advances in Austrian Economics. 18: 259-282. DOI: 10.1108/S1529-213420140000018012  1
2014 Kauffman S. Beyond the stalemate: Conscious mind-body - Quantum mechanics - Free will - Possible panpsychism - Possible interpretation of quantum enigma Cosmos and History. 10: 149-169.  1
2013 Kauffman S. Commentary on "An evolutionary framework for cultural change: Selectionism versus communal exchange" by Liane Gabora Physics of Life Reviews. 10: 154-155. PMID 23727330 DOI: 10.1016/J.Plrev.2013.05.005  1
2013 Heinäniemi M, Nykter M, Kramer R, Wienecke-Baldacchino A, Sinkkonen L, Zhou JX, Kreisberg R, Kauffman SA, Huang S, Shmulevich I. Gene-pair expression signatures reveal lineage control. Nature Methods. 10: 577-83. PMID 23603899 DOI: 10.1038/Nmeth.2445  1
2013 Gabora L, Scott EO, Kauffman S. A quantum model of exaptation: incorporating potentiality into evolutionary theory. Progress in Biophysics and Molecular Biology. 113: 108-16. PMID 23567156 DOI: 10.1016/J.Pbiomolbio.2013.03.012  1
2013 Kauffman S. What is life, and can we create it? Bioscience. 63: 609-610. DOI: 10.1525/bio.2013.63.8.2  1
2013 Huang S, Kauffman S. How to escape the cancer attractor: Rationale and limitations of multi-target drugs Seminars in Cancer Biology. 23: 270-278. DOI: 10.1016/j.semcancer.2013.06.003  1
2013 Hordijk W, Steel M, Kauffman S. The origin of life, evolution, and functional organization Evolutionary Biology: Exobiology and Evolutionary Mechanisms. 49-60. DOI: 10.1007/978-3-642-38212-3_4  1
2013 Huang S, Kauffman SA. Complex gene regulatory networks - From structure to biological observables: Cell fate determination Computational Complexity: Theory, Techniques, and Applications. 527-560. DOI: 10.1007/978-1-4614-1800-9_35  1
2013 Solée RV, Valverde S, Casals MR, Kauffman SA, Farmer D, Eldredge N. The evolutionary ecology of technological innovations Complexity. 18: 15-27. DOI: 10.1002/Cplx.21436  1
2012 Eppstein MJ, Horbar JD, Buzas JS, Kauffman SA. Searching the clinical fitness landscape. Plos One. 7: e49901. PMID 23166791 DOI: 10.1371/Journal.Pone.0049901  1
2012 Hordijk W, Steel M, Kauffman S. The Structure of Autocatalytic Sets: Evolvability, Enablement, and Emergence Acta Biotheoretica. 60: 379-392. PMID 23053465 DOI: 10.1007/S10441-012-9165-1  1
2012 Vasas V, Fernando C, Santos M, Kauffman S, Szathmáry E. Evolution before genes Biology Direct. 7. PMID 22221860 DOI: 10.1186/1745-6150-7-1  1
2012 Filisetti A, Graudenzi A, Serra R, Villani M, Füchslin RM, Packard N, Kauffman SA, Poli I. A stochastic model of autocatalytic reaction networks. Theory in Biosciences = Theorie in Den Biowissenschaften. 131: 85-93. PMID 21979857 DOI: 10.1007/S12064-011-0136-X  1
2012 Longo G, Montévil M, Kauffman S. No entailing laws, but enablement in the evolution of the biosphere Gecco'12 - Proceedings of the 14th International Conference On Genetic and Evolutionary Computation Companion. 1379-1391. DOI: 10.1145/2330784.2330946  1
2012 Zia A, Kauffman S, Niiranen S. The prospects and limits of algorithms in simulating creative decision making Emergence: Complexity and Organization. 14: 89-109.  1
2011 Kauffman SA. Approaches to the origin of life on Earth. Life (Basel, Switzerland). 1: 34-48. PMID 25382055 DOI: 10.3390/Life1010034  1
2011 Labean TH, Butt TR, Kauffman SA, Schultes EA. Protein folding absent selection. Genes. 2: 608-26. PMID 24710212 DOI: 10.3390/Genes2030608  1
2011 Hordijk W, Kauffman SA, Steel M. Required levels of catalysis for emergence of autocatalytic sets in models of chemical reaction systems. International Journal of Molecular Sciences. 12: 3085-101. PMID 21686171 DOI: 10.3390/Ijms12053085  1
2011 Seely AJ, Kauffman SA, Bates JH, Macklem PT, Suki B, Marshall JC, Batchinsky AI, Perez-Velazquez JL, Seiver A, McGregor C, Maksym G, Kamath MV, Similowski T, Buchman TG, Letellier C, et al. Proceedings from the Montebello Round Table Discussion. Second annual conference on Complexity and Variability discusses research that brings innovation to the bedside. Journal of Critical Care. 26: 325-7. PMID 21616298 DOI: 10.1016/J.Jcrc.2011.04.002  1
2011 Graudenzi A, Serra R, Villani M, Colacci A, Kauffman SA. Robustness analysis of a Boolean model of gene regulatory network with memory. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 18: 559-77. PMID 21417939 DOI: 10.1089/Cmb.2010.0224  1
2011 Damiani C, Serra R, Villani M, Kauffman SA, Colacci A. Cell-cell interaction and diversity of emergent behaviours. Iet Systems Biology. 5: 137-44. PMID 21405202 DOI: 10.1049/Iet-Syb.2010.0039  1
2011 Graudenzi A, Serra R, Villani M, Damiani C, Colacci A, Kauffman SA. Dynamical properties of a boolean model of gene regulatory network with memory. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 18: 1291-303. PMID 21214342 DOI: 10.1089/Cmb.2010.0069  1
2011 Barbieri A, Villani M, Serra R, Kauffman SA, Colacci A. Cell differentiation in noisy random Boolean network Frontiers in Artificial Intelligence and Applications. 226: 209-217. DOI: 10.3233/978-1-60750-692-8-209  1
2011 Beckage B, Gross LJ, Kauffman S. The limits to prediction in ecological systems Ecosphere. 2. DOI: 10.1890/Es11-00211.1  1
2011 Filisetti A, Graudenzi A, Serra R, Villani M, Lucrezia DD, Füchslin RM, Kauffman SA, Packard N, Poli I. A stochastic model of the emergence of autocatalytic cycles Journal of Systems Chemistry. 2. DOI: 10.1186/1759-2208-2-2  1
2010 Andrecut M, Kauffman SA. Phase transition in a class of nonlinear random networks. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 82: 022105. PMID 20866861 DOI: 10.1103/Physreve.82.022105  1
2010 Serra R, Villani M, Barbieri A, Kauffman SA, Colacci A. On the dynamics of random Boolean networks subject to noise: attractors, ergodic sets and cell types. Journal of Theoretical Biology. 265: 185-93. PMID 20399217 DOI: 10.1016/J.Jtbi.2010.04.012  1
2010 Kauffman SA. Evolution beyond newton, darwin, and entailing law: The origin of complexity in the evolving biosphere Complexity and the Arrow of Time. 162-190. DOI: 10.1017/CBO9781139225700.011  1
2010 Kauffman SA. What is life? was schrödinger right? The Nature of Life: Classical and Contemporary Perspectives From Philosophy and Science. 374-391. DOI: 10.1017/CBO9780511730191.036  1
2010 Damiani C, Kauffman SA, Serra R, Villani M, Colacci A. Information transfer among coupled random Boolean networks Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 6350: 1-11. DOI: 10.1007/978-3-642-15979-4_1  1
2010 Kauffman S. On emergence Origins of Life and Evolution of Biospheres. 40: 381-383.  1
2010 Kauffman S. On the origin of catalytic cycles Origins of Life and Evolution of Biospheres. 40: 406-407.  1
2009 Foster DV, Foster JG, Huang S, Kauffman SA. A model of sequential branching in hierarchical cell fate determination. Journal of Theoretical Biology. 260: 589-97. PMID 19615382 DOI: 10.1016/J.Jtbi.2009.07.005  1
2009 Huang S, Ernberg I, Kauffman S. Cancer attractors: A systems view of tumors from a gene network dynamics and developmental perspective Seminars in Cell and Developmental Biology. 20: 869-876. PMID 19595782 DOI: 10.1016/J.Semcdb.2009.07.003  1
2009 Andrecut M, Foster D, Carteret H, Kauffman SA. Maximal information transfer and behavior diversity in Random Threshold Networks. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 16: 909-16. PMID 19580520 DOI: 10.1089/Cmb.2009.0007  1
2009 Huang AC, Hu L, Kauffman SA, Zhang W, Shmulevich I. Using cell fate attractors to uncover transcriptional regulation of HL60 neutrophil differentiation. Bmc Systems Biology. 3: 20. PMID 19222862 DOI: 10.1186/1752-0509-3-20  1
2009 Ribeiro AS, Grefenstette JJ, Kauffman SA. Modeling gene regulatory networks with delayed stochastic dynamics Handbook of Research On Computational Methodologies in Gene Regulatory Networks. 198-218. DOI: 10.4018/978-1-60566-685-3.ch008  1
2009 Barbieri A, Villani M, Serra R, Kauffman SA, Colacci A. The influence of noise on the dynamics of Random Boolean Network Frontiers in Artificial Intelligence and Applications. 204: 11-18. DOI: 10.3233/978-1-60750-072-8-11  1
2008 Carteret HA, Rose KJ, Kauffman SA. Maximum power efficiency and criticality in random Boolean networks. Physical Review Letters. 101: 218702. PMID 19113460 DOI: 10.1103/Physrevlett.101.218702  1
2008 Wilds R, Kauffman SA, Glass L. Evolution of complex dynamics. Chaos (Woodbury, N.Y.). 18: 033109. PMID 19045447 DOI: 10.1063/1.2962223  1
2008 Andrecut M, Huang S, Kauffman SA. Heuristic approach to sparse approximation of gene regulatory networks. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 15: 1173-86. PMID 18844584 DOI: 10.1089/Cmb.2008.0087  1
2008 Balleza E, Alvarez-Buylla ER, Chaos A, Kauffman S, Shmulevich I, Aldana M. Critical dynamics in genetic regulatory networks: Examples from four kingdoms Plos One. 3. PMID 18560561 DOI: 10.1371/Journal.Pone.0002456  1
2008 Nykter M, Price ND, Larjo A, Aho T, Kauffman SA, Yli-Harja O, Shmulevich I. Critical networks exhibit maximal information diversity in structure-dynamics relationships. Physical Review Letters. 100: 058702. PMID 18352443 DOI: 10.1103/Physrevlett.100.058702  1
2008 Ribeiro AS, Kauffman SA, Lloyd-Price J, Samuelsson B, Socolar JE. Mutual information in random Boolean models of regulatory networks. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 77: 011901. PMID 18351870 DOI: 10.1103/Physreve.77.011901  1
2008 Andrecut M, Kauffman SA. On the sparse reconstruction of gene networks. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 15: 21-30. PMID 18257675 DOI: 10.1089/Cmb.2007.0185  1
2008 Nykter M, Price ND, Aldana M, Ramsey SA, Kauffman SA, Hood LE, Yli-Harja O, Shmulevich I. Gene expression dynamics in the macrophage exhibit criticality. Proceedings of the National Academy of Sciences of the United States of America. 105: 1897-900. PMID 18250330 DOI: 10.1073/Pnas.0711525105  1
2008 Andrecut M, Cloud D, Kauffman SA. Monte Carlo simulation of a simple gene network yields new evolutionary insights. Journal of Theoretical Biology. 250: 468-74. PMID 18061620 DOI: 10.1016/J.Jtbi.2007.10.035  1
2008 Serra R, Villani M, Graudenzi A, Colacci A, Kauffman SA. The simulation of gene knock-out in scale-free random boolean models of genetic networks Networks and Heterogeneous Media. 3: 333-343. DOI: 10.3934/Nhm.2008.3.333  1
2008 Andrecut M, Kauffman SA, Madni AM. Evidence of scale-free topology in gene regulatory network of human tissues International Journal of Modern Physics C. 19: 283-290. DOI: 10.1142/S0129183108012091  1
2008 Kauffman SA. Systems chemistry sketches Acs Symposium Series. 981: 310-324. DOI: 10.1021/bk-2008-0981.ch017  1
2008 Andrecut M, Kauffman SA. Energy and criticality in random Boolean networks Physics Letters, Section a: General, Atomic and Solid State Physics. 372: 4757-4760. DOI: 10.1016/J.Physleta.2008.05.041  1
2008 Kauffman S, Logan RK, Este R, Goebel R, Hobill D, Shmulevich I. Propagating organization: An enquiry Biology and Philosophy. 23: 27-45. DOI: 10.1007/S10539-007-9066-X  1
2007 Hanel R, Kauffman SA, Thurner S. Towards a physics of evolution: critical diversity dynamics at the edges of collapse and bursts of diversification. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 76: 036110. PMID 17930309 DOI: 10.1103/Physreve.76.036110  1
2007 Andrecut M, Kauffman SA. A physical analogy of the genetic toggle switch. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 14: 973-83. PMID 17803374 DOI: 10.1089/Cmb.2007.0038  1
2007 Kauffman S. Question 1: Origin of life and the living state Origins of Life and Evolution of Biospheres. 37: 315-322. PMID 17674139 DOI: 10.1007/S11084-007-9093-2  1
2007 Ribeiro AS, Kauffman SA. Noisy attractors and ergodic sets in models of gene regulatory networks. Journal of Theoretical Biology. 247: 743-55. PMID 17543998 DOI: 10.1016/J.Jtbi.2007.04.020  1
2007 Zhu R, Ribeiro AS, Salahub D, Kauffman SA. Studying genetic regulatory networks at the molecular level: delayed reaction stochastic models. Journal of Theoretical Biology. 246: 725-45. PMID 17350653 DOI: 10.1016/J.Jtbi.2007.01.021  1
2007 Serra R, Villani M, Graudenzi A, Kauffman SA. Why a simple model of genetic regulatory networks describes the distribution of avalanches in gene expression data. Journal of Theoretical Biology. 246: 449-60. PMID 17316697 DOI: 10.1016/J.Jtbi.2007.01.012  1
2007 Aldana M, Balleza E, Kauffman S, Resendiz O. Robustness and evolvability in genetic regulatory networks Journal of Theoretical Biology. 245: 433-448. PMID 17188715 DOI: 10.1016/J.Jtbi.2006.10.027  1
2007 Kauffman S. Beyond reductionism: Reinventing the sacred Zygon. 42: 903-914. DOI: 10.1111/J.1467-9744.2007.00879.X  1
2007 Manninen T, Ribeiro A, Lloyd-Price J, Linne ML, Ruohonen K, Yli-Harja O, Kauffman SA. Parameter estimation and tuning of firefly luciferase pathway model Gensips'07 - 5th Ieee International Workshop On Genomic Signal Processing and Statistics. DOI: 10.1109/GENSIPS.2007.4365829  1
2007 Andrecut M, Este RA, Kauffman SA. Competitive optimization of compressed sensing Journal of Physics a: Mathematical and Theoretical. 40: F299-F305. DOI: 10.1088/1751-8113/40/16/F02  1
2007 Andrecut M, Este RA, Kauffman SA. Analog random coding Physics Letters, Section a: General, Atomic and Solid State Physics. 366: 550-555. DOI: 10.1016/J.Physleta.2007.05.019  1
2007 Andrecut M, Kauffman SA. Chaos in a discrete model of a two-gene system Physics Letters, Section a: General, Atomic and Solid State Physics. 367: 281-287. DOI: 10.1016/j.physleta.2007.03.074  1
2007 Rämö P, Kauffman S, Kesseli J, Yli-Harja O. Measures for information propagation in Boolean networks Physica D: Nonlinear Phenomena. 227: 100-104. DOI: 10.1016/J.Physd.2006.12.005  1
2006 Ribeiro A, Zhu R, Kauffman SA. A general modeling strategy for gene regulatory networks with stochastic dynamics. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 13: 1630-9. PMID 17147485 DOI: 10.1089/Cmb.2006.13.1630  1
2006 Kauffman SA. The evolution of future wealth. Scientific American. 295: 44. PMID 17076082 DOI: 10.1038/Scientificamerican1106-44  1
2006 Foster DV, Kauffman SA, Socolar JE. Network growth models and genetic regulatory networks. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 73: 031912. PMID 16605563 DOI: 10.1103/Physreve.73.031912  1
2006 Grefenstette J, Kim S, Kauffman S. An analysis of the class of gene regulatory functions implied by a biochemical model Biosystems. 84: 81-90. PMID 16384633 DOI: 10.1016/J.Biosystems.2005.09.009  1
2006 Andrecut M, Kauffman SA. Mean field model of the genetic toggle switch International Journal of Modern Physics B. 20: 4947-4963. DOI: 10.1142/S021797920603576X  1
2006 Andrecut M, Kauffman SA. Mean-field model of genetic regulatory networks New Journal of Physics. 8. DOI: 10.1088/1367-2630/8/8/148  1
2006 Andrecut M, Kauffman SA. A simple method for reverse engineering causal networks Journal of Physics a: Mathematical and General. 39: L647-L655. DOI: 10.1088/0305-4470/39/46/L01  1
2006 Kauffman S, Clayton P. On emergence, agency, and organization Biology and Philosophy. 21: 501-521. DOI: 10.1007/S10539-005-9003-9  1
2006 Ribeiro AS, Este RA, Lloyd-Price J, Kauffman SA. Measuring information propagation and retention in Boolean networks and its implication to a model of human organizations Wseas Transactions On Systems. 5: 2935-2942.  1
2006 Villani M, Serra R, Ingrami P, Kauffman SA. Coupled random boolean network forming an artificial tissue Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 4173: 548-556.  1
2006 Ribeiro AS, Este RA, Kauffman SA. A measure of efficiency of orientation systems in building structures Cisti 2006 - Actas Da 1a Conferencia Iberica De Sistemas E Tecnologias De Informacao. 2: 943-957.  1
2005 Toulouse T, Ao P, Shmulevich I, Kauffman S. Noise in a Small Genetic Circuit that Undergoes Bifurcation. Complexity. 11: 45-51. PMID 16670776 DOI: 10.1002/Cplx.20099  1
2005 Hanel R, Kauffman SA, Thurner S. Phase transition in random catalytic networks. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 72: 036117. PMID 16241525 DOI: 10.1103/Physreve.72.036117  1
2005 Shmulevich I, Kauffman SA, Aldana M. Eukaryotic cells are dynamically ordered or critical but not chaotic. Proceedings of the National Academy of Sciences of the United States of America. 102: 13439-44. PMID 16155121 DOI: 10.1073/Pnas.0506771102  1
2005 Dealy S, Kauffman S, Socolar J. Modeling pathways of differentiation in genetic regulatory networks with Boolean networks Complexity. 11: 52-60. DOI: 10.1002/Cplx.20100  1
2005 Hordijk W, Kauffman SA. Correlation analysis of coupled fitness landscapes Complexity. 10: 41-49. DOI: 10.1002/Cplx.20092  1
2005 Este RA, Kauffman SA. Some thoughts on unprecedented conceptual challenges presented by holonic multi-agent systems Conference Proceedings - Ieee International Conference On Systems, Man and Cybernetics. 2: 1724-1729.  1
2004 Kauffman S, Peterson C, Samuelsson B, Troein C. Genetic networks with canalyzing Boolean rules are always stable Proceedings of the National Academy of Sciences of the United States of America. 101: 17102-17107. PMID 15572453 DOI: 10.1073/Pnas.0407783101  1
2004 Kauffman S. A proposal for using the ensemble approach to understand genetic regulatory networks Journal of Theoretical Biology. 230: 581-590. PMID 15363677 DOI: 10.1016/J.Jtbi.2003.12.017  1
2004 Shmulevich I, Kauffman SA. Activities and sensitivities in boolean network models. Physical Review Letters. 93: 048701. PMID 15323803 DOI: 10.1103/Physrevlett.93.048701  1
2004 Kauffman S. The ensemble approach to understand genetic regulatory networks Physica a: Statistical Mechanics and Its Applications. 340: 733-740. DOI: 10.1016/J.Physa.2004.05.018  1
2004 Semeria A, Villani M, Serra R, Kauffman SA. Perturbation in genetic regulatory networks: Simulation and experiments Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 3305: 533-542.  1
2003 Solé RV, Fernández P, Kauffman SA. Adaptive walks in a gene network model of morphogenesis: insights into the Cambrian explosion. The International Journal of Developmental Biology. 47: 685-93. PMID 14756344 DOI: 10.1387/Ijdb.14756344  1
2003 Kauffman S, Peterson C, Samuelssont B, Troein C. Random Boolean network models and the yeast transcriptional network Proceedings of the National Academy of Sciences of the United States of America. 100: 14796-14799. PMID 14657375 DOI: 10.1073/Pnas.2036429100  1
2003 Socolar JE, Kauffman SA. Scaling in ordered and critical random boolean networks. Physical Review Letters. 90: 068702. PMID 12633339 DOI: 10.1103/Physrevlett.90.068702  1
2002 Daley AJ, Girvin A, Kauffman SA, Wills PR, Yamins D. Simulation of a chemical autonomous agent Zeitschrift Fur Physikalische Chemie. 216: 41-49. DOI: 10.1524/Zpch.2002.216.1.041  1
2001 Kauffman SA. Prolegomenon to a general biology. Annals of the New York Academy of Sciences. 935: 18-36; discussion 37. PMID 11411165 DOI: 10.1111/J.1749-6632.2001.Tb03466.X  1
1998 Wills PR, Kauffman SA, Stadler BM, Stadler PF. Selection dynamics in autocatalytic systems: templates replicating through binary ligation. Bulletin of Mathematical Biology. 60: 1073-98. PMID 9866451 DOI: 10.1006/S0092-8240(98)90003-9  1
1996 Macready WG, Siapas AG, Kauffman SA. Criticality and parallelism in combinatorial optimization. Science (New York, N.Y.). 271: 56-9. PMID 8539600 DOI: 10.1126/Science.271.5245.56  1
1995 LaBean TH, Kauffman SA, Butt TR. Libraries of random-sequence polypeptides produced with high yield as carboxy-terminal fusions with ubiquitin. Molecular Diversity. 1: 29-38. PMID 9237192 DOI: 10.1007/Bf01715807  1
1995 Kauffman SA, Macready WG. Search strategies for applied molecular evolution. Journal of Theoretical Biology. 173: 427-40. PMID 7783452 DOI: 10.1006/Jtbi.1995.0074  1
1993 Goodwin BC, Kauffman S, Murray JD. Is morphogenesis an intrinsically robust process? Journal of Theoretical Biology. 163: 135-44. PMID 8412239 DOI: 10.1006/Jtbi.1993.1112  1
1993 LaBean TH, Kauffman SA. Design of synthetic gene libraries encoding random sequence proteins with desired ensemble characteristics. Protein Science : a Publication of the Protein Society. 2: 1249-54. PMID 8401210 DOI: 10.1002/Pro.5560020807  1
1992 Kauffman SA. Applied molecular evolution. Journal of Theoretical Biology. 157: 1-7. PMID 1434670 DOI: 10.1016/S0022-5193(05)80753-2  1
1991 Kauffman SA, Johnsen S. Coevolution to the edge of chaos: coupled fitness landscapes, poised states, and coevolutionary avalanches. Journal of Theoretical Biology. 149: 467-505. PMID 2062105 DOI: 10.1016/S0022-5193(05)80094-3  1
1991 Kauffman SA. Antichaos and adaptation. Scientific American. 265: 78-84. PMID 1862333 DOI: 10.1038/Scientificamerican0891-78  1
1990 Kauffman SA, Goodwin BC. Spatial harmonics and pattern specification in early Drosophila development. Part II. The four colour wheels model. Journal of Theoretical Biology. 144: 321-45. PMID 2395375 DOI: 10.1016/S0022-5193(05)80079-7  1
1990 Goodwin BC, Kauffman SA. Spatial harmonics and pattern specification in early Drosophila development. Part I. Bifurcation sequences and gene expression. Journal of Theoretical Biology. 144: 303-19. PMID 2395374 DOI: 10.1016/S0022-5193(05)80078-5  1
1990 Hunding A, Kauffman SA, Goodwin BC. Drosophila segmentation: supercomputer simulation of prepattern hierarchy. Journal of Theoretical Biology. 145: 369-84. PMID 2232822 DOI: 10.1016/S0022-5193(05)80116-X  1
1990 Kauffman SA. Requirements for evolvability in complex systems: Orderly dynamics and frozen components Physica D: Nonlinear Phenomena. 42: 135-152. DOI: 10.1016/0167-2789(90)90071-V  1
1989 Kauffman SA, Weinberger ED. The NK model of rugged fitness landscapes and its application to maturation of the immune response. Journal of Theoretical Biology. 141: 211-45. PMID 2632988 DOI: 10.1016/S0022-5193(89)80019-0  1
1989 Bagley RJ, Farmer JD, Kauffman SA, Packard NH, Perelson AS, Stadnyk IM. Modeling adaptive biological systems. Bio Systems. 23: 113-37; discussion 1. PMID 2627562 DOI: 10.1016/0303-2647(89)90016-6  1
1989 Kauffman SA. Cambrian explosion and Permian quiescence: Implications of rugged fitness landscapes Evolutionary Ecology. 3: 274-281. DOI: 10.1007/Bf02270728  1
1987 Kauffman SA. Developmental logic and its evolution. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 6: 82-7. PMID 3566729 DOI: 10.1002/Bies.950060211  1
1987 Farmer JD, Kauffman SA, Packard NH, Perelson AS. Adaptive dynamic networks as models for the immune system and autocatalytic sets. Annals of the New York Academy of Sciences. 504: 118-31. PMID 3477111 DOI: 10.1111/J.1749-6632.1987.Tb48728.X  1
1986 Kauffman SA. Autocatalytic sets of proteins. Journal of Theoretical Biology. 119: 1-24. PMID 3713221 DOI: 10.1016/S0022-5193(86)80047-9  1
1986 Kornher JS, Kauffman SA. Variegated expression of the Sgs-4 locus in Drosophila melanogaster. Chromosoma. 94: 205-16. PMID 3095057 DOI: 10.1007/BF00288495  1
1986 Kauffman SA, Smith RG. Adaptive automata based on Darwinian selection Physica D: Nonlinear Phenomena. 22: 68-82. DOI: 10.1016/0167-2789(86)90234-4  1
1986 Farmer JD, Kauffman SA, Packard NH. Autocatalytic replication of polymers Physica D: Nonlinear Phenomena. 22: 50-67. DOI: 10.1016/0167-2789(86)90233-2  1
1986 Bedian V, Oliver CE, McCoon P, Kauffman SA. A cell surface differentiation antigen of Drosophila Developmental Biology. 115: 105-118. DOI: 10.1016/0012-1606(86)90232-0  1
1986 Summers MC, Bedian V, Kauffman SA. An analysis of stage-specific protein synthesis in the early Drosophila embryo using high-resolution, two-dimensional gel electrophoresis Developmental Biology. 113: 49-63. DOI: 10.1016/0012-1606(86)90107-7  1
1984 Klevecz RR, Kauffman SA, Shymko RM. Cellular clocks and oscillators. International Review of Cytology. 86: 97-128. PMID 6368450  1
1984 Kauffman SA. Emergent properties in random complex automata Physica D: Nonlinear Phenomena. 10: 145-156. DOI: 10.1016/0167-2789(84)90257-4  1
1982 Kauffman SA, Shymko RM. Mitotic delay following inhibition by 5'-fluorodeoxyuridine of S-phase in Physarum is not due to delay in termination of S-phase. Journal of Cell Science. 53: 143-54. PMID 6211461  1
1981 Kauffman SA. Patterns of temperature sensitivity in Contrabithorax/Ultrabithorax heterozygotes of Drosophila. Developmental Biology. 88: 341-51. PMID 6796444 DOI: 10.1016/0012-1606(81)90178-0  1
1981 Kauffman SA, Ling E. Regeneration by complementary wing disc fragments of Drosophila melanogaster. Developmental Biology. 82: 238-57. PMID 6785122 DOI: 10.1016/0012-1606(81)90449-8  1
1981 Kauffman SA. Pattern formation in the Drosophila embryo. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 295: 567-94. PMID 6117912  1
1980 Kauffman SA, Ling E. Timing and heritability of the Nasobemia transformation in Drosophila Wilhelm Roux's Archives of Developmental Biology. 189: 147-153. DOI: 10.1007/BF00848503  1
1980 Kauffman SA. Heterotopic transplantation in the syncytial blastoderm of Drosophila: Evidence for anterior and posterior nuclear commitments Wilhelm Roux's Archives of Developmental Biology. 189: 135-145. DOI: 10.1007/BF00848502  1
1978 Kauffman SA, Shymko RM, Trabert K. Control of sequential compartment formation in Drosophila. Science (New York, N.Y.). 199: 259-70. PMID 413193  1
1977 Wille JJ, Scheffey C, Kauffman SA. Novel behaviour of the mitotic clock in Physarum. Journal of Cell Science. 27: 91-104. PMID 563413  1
1977 Kauffman SA. Chemical patterns, compartments and a binary epigenetic code in drosophila Integrative and Comparative Biology. 17: 631-648. DOI: 10.1093/Icb/17.3.631  1
1975 Wille JJ, Kauffman SA. Premature replication of late S period DNA regions in early S nuclei transferred to late S cytoplasm by fusion in Physarum polycephalum. Biochimica Et Biophysica Acta. 407: 158-73. PMID 1237322 DOI: 10.1016/0005-2787(75)90282-8  1
1975 Kauffman SA, Wille JJ. The mitotic oscillator in Physarum polycephalum II Biophysical Journal. 15: 119A.  1
1973 Glass L, Kauffman SA. The logical analysis of continuous, non-linear biochemical control networks. Journal of Theoretical Biology. 39: 103-29. PMID 4741704 DOI: 10.1016/0022-5193(73)90208-7  1
1973 Kauffman SA. Control circuits for determination and transdetermination. Science (New York, N.Y.). 181: 310-8. PMID 4198229  1
1972 Glass L, Kauffman SA. Co-operative components, spatial localization and oscillatory cellular dynamics. Journal of Theoretical Biology. 34: 219-37. PMID 5015702 DOI: 10.1016/0022-5193(72)90157-9  1
1969 Kauffman SA. Metabolic stability and epigenesis in randomly constructed genetic nets. Journal of Theoretical Biology. 22: 437-67. PMID 5803332 DOI: 10.1016/0022-5193(69)90015-0  1
1967 Kauffman SA. Sequential DNA replication and the control of differences in gene activity between sister chromatids--a possible factor in cell differentiation. Journal of Theoretical Biology. 17: 483-97. PMID 5586527  1
Show low-probability matches.