Johan-Owen De Craene, Ph. D. - Related publications

2016- Biomolécules et Biotechnologies Végétales Universite de Tours 
yeast synthetic biology and evolution
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Sicking M, Jung M, Lang S. Lights, Camera, Interaction: Studying Protein-Protein Interactions of the ER Protein Translocase in Living Cells. International Journal of Molecular Sciences. 22. PMID 34638699 DOI: 10.3390/ijms221910358   
2021 Huang Y, Yin H, Li B, Wu Q, Liu Y, Poljak K, Maldutyte J, Tang X, Wang M, Wu Z, Miller EA, Jiang L, Yao ZP, Guo Y. An in vitro vesicle formation assay reveals cargo clients and factors that mediate vesicular trafficking. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34433667 DOI: 10.1073/pnas.2101287118   
2021 Hegde RS, Keenan RJ. The mechanisms of integral membrane protein biogenesis. Nature Reviews. Molecular Cell Biology. PMID 34556847 DOI: 10.1038/s41580-021-00413-2   
2021 Matsuo Y. Introducing Thioredoxin-related Transmembrane Proteins: Emerging Roles of Human TMX and Clinical Implications. Antioxidants & Redox Signaling. PMID 34465218 DOI: 10.1089/ars.2021.0187   
2021 Wang Z, Mim C. Optimizing purification of the peripheral membrane protein FAM92A1 fused to a modified spidroin tag. Protein Expression and Purification. 189: 105992. PMID 34648955 DOI: 10.1016/j.pep.2021.105992   
2021 Leznicki P, Schneider HO, Harvey JV, Shi WQ, High S. Co-translational biogenesis of lipid droplet integral membrane proteins. Journal of Cell Science. PMID 34558621 DOI: 10.1242/jcs.259220   
2021 Cao S, Peterson SM, Müller S, Reichelt M, McRoberts Amador C, Martinez-Martin N. A membrane protein display platform for receptor interactome discovery. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34531301 DOI: 10.1073/pnas.2025451118   
2021 Sun Z, Guerriero CJ, Brodsky JL. Substrate ubiquitination retains misfolded membrane proteins in the endoplasmic reticulum for degradation. Cell Reports. 36: 109717. PMID 34551305 DOI: 10.1016/j.celrep.2021.109717   
2021 Hawkins WD, Klionsky DJ. The expanding role of Atg8. Autophagy. 1-2. PMID 34482799 DOI: 10.1080/15548627.2021.1967566   
2021 Lee KH, Wang S, Du Q, Chhetri GT, Qi L, Wang H. The XVP/ NAC003 protein associates with the plasma membrane through KR rich regions and translocates to the nucleus by changing phosphorylation status. Plant Signaling & Behavior. 1970449. PMID 34498541 DOI: 10.1080/15592324.2021.1970449   
2021 Suzuki SW, Oishi A, Nikulin N, Jorgensen JR, Baile MG, Emr SD. A PX-BAR protein Mvp1/SNX8 and a dynamin-like GTPase Vps1 drive endosomal recycling. Elife. 10. PMID 34524084 DOI: 10.7554/eLife.69883   
2021 Bentley-DeSousa A, Downey M. Vtc5 Is Localized to the Vacuole Membrane by the Conserved AP-3 Complex to Regulate Polyphosphate Synthesis in Budding Yeast. Mbio. e0099421. PMID 34544285 DOI: 10.1128/mBio.00994-21   
2021 Hackstadt T, Chiramel AI, Hoyt FH, Williamson BN, Dooley CA, Beare PA, de Wit E, Best SM, Fischer ER. Disruption of the Golgi Apparatus and Contribution of the Endoplasmic Reticulum to the SARS-CoV-2 Replication Complex. Viruses. 13. PMID 34578379 DOI: 10.3390/v13091798   
2021 Koch C, Schuldiner M, Herrmann JM. ER-SURF: Riding the Endoplasmic Reticulum Surface to Mitochondria. International Journal of Molecular Sciences. 22. PMID 34502567 DOI: 10.3390/ijms22179655   
2021 Li YH, Ke TY, Shih WC, Liou RF, Wang CW. NbSOBIR1 Partitions Into Plasma Membrane Microdomains and Binds ER-Localized RLP1. Frontiers in Plant Science. 12: 721548. PMID 34539715 DOI: 10.3389/fpls.2021.721548   
2021 Garcia JM, Schwabe MJ, Voelker DR, Riekhof WR. A functional genomic screen in Saccharomyces cerevisiae reveals divergent mechanisms of resistance to different alkylphosphocholine chemotherapeutic agents. G3 (Bethesda, Md.). 11. PMID 34568930 DOI: 10.1093/g3journal/jkab233   
2021 Synek L, Pleskot R, Sekereš J, Serrano N, Vukašinović N, Ortmannová J, Klejchová M, Pejchar P, Batystová K, Gutkowska M, Janková-Drdová E, Marković V, Pečenková T, Šantrůček J, Žárský V, et al. Plasma membrane phospholipid signature recruits the plant exocyst complex via the EXO70A1 subunit. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34470819 DOI: 10.1073/pnas.2105287118   
2021 Rahman F, Johnson JL, Zhang J, He J, Pestonjamasp K, Cherqui S, Catz SD. DYNC1LI2 regulates localization of the chaperone-mediated autophagy receptor LAMP2A and improves cellular homeostasis in cystinosis. Autophagy. 1-19. PMID 34643468 DOI: 10.1080/15548627.2021.1971937   
2021 Wei H, Wen W. Phase Separation in Cell Polarity. Biochemistry. PMID 34379397 DOI: 10.1021/acs.biochem.1c00372   
2021 Borgese N, Iacomino N, Colombo SF, Navone F. The Link between VAPB Loss of Function and Amyotrophic Lateral Sclerosis. Cells. 10. PMID 34440634 DOI: 10.3390/cells10081865   
2021 Batrouni AG, Bag N, Phan H, Baird BA, Baskin JM. A palmitoylation code controls PI4KIIIα complex formation and PI(4,5)P2 homeostasis at the plasma membrane. Journal of Cell Science. PMID 34569608 DOI: 10.1242/jcs.259365   
2021 Lemus L, Goder V. Pep4-dependent microautophagy is required for post-ER degradation of GPI-anchored proteins. Autophagy. 1-3. PMID 34491884 DOI: 10.1080/15548627.2021.1971929   
2021 Bernat-Silvestre C, Sánchez-Simarro J, Ma Y, Montero-Pau J, Johnson K, Aniento F, Marcote MJ. AtPGAP1 functions as a GPI inositol-deacylase required for efficient transport of GPI-anchored proteins. Plant Physiology. PMID 34618080 DOI: 10.1093/plphys/kiab384   
2021 Medina-Puche L, Kim C, Lozano-Duran R, Dogra V. Protocol for evaluating protein relocalization from the plasma membrane to chloroplasts. Star Protocols. 2: 100816. PMID 34585156 DOI: 10.1016/j.xpro.2021.100816   
2021 White DN, Stowell MHB. Room for Two: The Synaptophysin/Synaptobrevin Complex. Frontiers in Synaptic Neuroscience. 13: 740318. PMID 34616284 DOI: 10.3389/fnsyn.2021.740318   
2021 Overduin M, Kervin TA. The phosphoinositide code is read by a plethora of protein domains. Expert Review of Proteomics. 1-20. PMID 34351250 DOI: 10.1080/14789450.2021.1962302   
2021 Chen X, Liu Y, Jin J, Liu H, Hao Y, Zhang H, Xie Y. YbfA Regulates the Sensitivity of K12 to Plantaricin BM-1 the BasS/BasR Two-Component Regulatory System. Frontiers in Microbiology. 12: 659198. PMID 34484135 DOI: 10.3389/fmicb.2021.659198   
2021 Chiu YH, Lin SA, Kuo CH, Li CJ. Molecular Machinery and Pathophysiology of Mitochondrial Dynamics. Frontiers in Cell and Developmental Biology. 9: 743892. PMID 34604240 DOI: 10.3389/fcell.2021.743892   
2021 Tyagi V, Vasquez-Montes V, Freites JA, Kyrychenko A, Tobias DJ, Ladokhin AS. Effects of Cardiolipin on the Conformational Dynamics of Membrane-Anchored Bcl-xL. International Journal of Molecular Sciences. 22. PMID 34502299 DOI: 10.3390/ijms22179388   
2021 Li G, Segev N. Newer Methods Drive Recent Insights into Rab GTPase Biology: An Overview. Methods in Molecular Biology (Clifton, N.J.). 2293: 1-18. PMID 34453706 DOI: 10.1007/978-1-0716-1346-7_1   
2021 Geng M, Wang L, Zhang Y, Pei W, Qi M, Yang M, Xu J, Liang Y, Lü K, He C, Gao J. [Lysosomal membrane protein Sidt2 deletion impairs autophagy in human hepatocytes]. Nan Fang Yi Ke Da Xue Xue Bao = Journal of Southern Medical University. 41: 1207-1213. PMID 34549712 DOI: 10.12122/j.issn.1673-4254.2021.08.12   
2021 Iriondo MN, Etxaniz A, Antón Z, Montes LR, Alonso A. Molecular and mesoscopic geometries in autophagosome generation. A review. Biochimica Et Biophysica Acta. Biomembranes. 1863: 183731. PMID 34419487 DOI: 10.1016/j.bbamem.2021.183731   
2021 Lak B, Li S, Belevich I, Sree S, Butkovic R, Ikonen E, Jokitalo E. Specific subdomain localization of ER resident proteins and membrane contact sites resolved by electron microscopy. European Journal of Cell Biology. 100: 151180. PMID 34653930 DOI: 10.1016/j.ejcb.2021.151180   
2021 Eroumé KS, Cavill R, Staňková K, de Boer J, Carlier A. Exploring the influence of cytosolic and membrane FAK activation on YAP/TAZ nuclear translocation. Biophysical Journal. PMID 34509508 DOI: 10.1016/j.bpj.2021.09.009   
2021 Phillips DA, Zacharoff LA, Hampton CM, Chong GW, Malanoski AP, Metskas LA, Xu S, Bird LJ, Eddie BJ, Miklos AE, Jensen GJ, Drummy LF, El-Naggar MY, Glaven SM. A bacterial membrane sculpting protein with BAR domain-like activity. Elife. 10. PMID 34643180 DOI: 10.7554/eLife.60049   
2021 Broeskamp F, Edrich ESM, Knittelfelder O, Neuhaus L, Meyer T, Heyden J, Habernig L, Kreppel F, Gourlay CW, Rockenfeller P. Porin 1 Modulates Autophagy in Yeast. Cells. 10. PMID 34572064 DOI: 10.3390/cells10092416   
2021 Jennings ML. Cell Physiology and Molecular Mechanism of Anion Transport by Erythrocyte Band 3/AE1. American Journal of Physiology. Cell Physiology. PMID 34669510 DOI: 10.1152/ajpcell.00275.2021   
2021 Chaudhuri M, Tripathi A, Gonzalez FS. Diverse Functions of Tim50, a Component of the Mitochondrial Inner Membrane Protein Translocase. International Journal of Molecular Sciences. 22. PMID 34360547 DOI: 10.3390/ijms22157779   
2021 Kaplan M, Chreifi G, Metskas LA, Liedtke J, Wood CR, Oikonomou CM, Nicolas WJ, Subramanian P, Zacharoff LA, Wang Y, Chang YW, Beeby M, Dobro M, Zhu Y, McBride M, et al. imaging of bacterial outer membrane projections and associated protein complexes using electron cryo-tomography. Elife. 10. PMID 34468314 DOI: 10.7554/eLife.73099   
2021 Shin J, Nile A, Oh JW. Role of adaptin protein complexes in intracellular trafficking and their impact on diseases. Bioengineered. PMID 34565296 DOI: 10.1080/21655979.2021.1982846   
2021 Reinkemeier CD, Lemke EA. Dual film-like organelles enable spatial separation of orthogonal eukaryotic translation. Cell. PMID 34433013 DOI: 10.1016/j.cell.2021.08.001   
2021 Yue X, Qian Y, Zhu L, Gim B, Bao M, Jia J, Jing S, Wang Y, Tan C, Bottanelli F, Ziltener P, Choi S, Hao P, Lee I. ACBD3 modulates KDEL receptor interaction with PKA for its trafficking via tubulovesicular carrier. Bmc Biology. 19: 194. PMID 34493279 DOI: 10.1186/s12915-021-01137-7   
2021 Chen J, Bassot A, Giuliani F, Simmen T. Amyotrophic Lateral Sclerosis (ALS): Stressed by Dysfunctional Mitochondria-Endoplasmic Reticulum Contacts (MERCs). Cells. 10. PMID 34359958 DOI: 10.3390/cells10071789   
2021 Kam KL, Parrack P, Banworth M, Aravindan S, Li G, Fung KM. Use of Immunohistochemistry to Determine Expression of Rab5 Subfamily of GTPases in Mature and Developmental Brains. Methods in Molecular Biology (Clifton, N.J.). 2293: 265-271. PMID 34453724 DOI: 10.1007/978-1-0716-1346-7_19   
2021 Yuan H, Novick P. Testing the Phenotypic Effects of a Rab Chimera that Resolves Exchange Factor Specificity from Effector Specificity. Methods in Molecular Biology (Clifton, N.J.). 2293: 57-67. PMID 34453710 DOI: 10.1007/978-1-0716-1346-7_5   
2021 Hassan Z, Kumar ND, Reggiori F, Khan G. How Viruses Hijack and Modify the Secretory Transport Pathway. Cells. 10. PMID 34685515 DOI: 10.3390/cells10102535   
2021 Huang SSY, Toufiq M, Saraiva LR, Van Panhuys N, Chaussabel D, Garand M. Transcriptome and Literature Mining Highlight the Differential Expression of ERLIN1 in Immune Cells during Sepsis. Biology. 10. PMID 34439987 DOI: 10.3390/biology10080755   
2021 Wang J, Wang S, Ferro-Novick S. Methods for Assessing the Regulation of a Kinase by the Rab GTPase Ypt1. Methods in Molecular Biology (Clifton, N.J.). 2293: 201-211. PMID 34453719 DOI: 10.1007/978-1-0716-1346-7_14   
2021 Guo C, Cheng M, Li W, Gross ML. Diethylpyrocarbonate Footprints a Membrane Protein in Micelles. Journal of the American Society For Mass Spectrometry. PMID 34664961 DOI: 10.1021/jasms.1c00172   
2021 Teixeira V, Martins TS, Prinz WA, Costa V. Target of Rapamycin Complex 1 (TORC1), Protein Kinase A (PKA) and Cytosolic pH Regulate a Transcriptional Circuit for Lipid Droplet Formation. International Journal of Molecular Sciences. 22. PMID 34445723 DOI: 10.3390/ijms22169017