Adam Leaché, Ph.D. - Publications

Affiliations: 
Biology University of Washington, Seattle, Seattle, WA 

44 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Linkem CW, Minin VN, Leaché AD. Detecting the anomaly zone in species trees and evidence for a misleading signal in higher-level skink phylogeny (Squamata: Scincidae). Systematic Biology. PMID 26738927 DOI: 10.1093/Sysbio/Syw001  0.4
2015 Fong JJ, Li PP, Yang BT, Zhou ZY, Leaché AD, Min MS, Waldman B. Influence of geology and human activity on the genetic structure and demography of the Oriental fire-bellied toad (Bombina orientalis). Molecular Phylogenetics and Evolution. PMID 26748269 DOI: 10.1016/J.Ympev.2015.12.019  0.92
2015 Edwards SV, Xi Z, Janke A, Faircloth BC, McCormack JE, Glenn TC, Zhong B, Wu S, Lemmon EM, Lemmon AR, Leaché AD, Liu L, Davis CC. Implementing and testing the multispecies coalescent model: A valuable paradigm for phylogenomics. Molecular Phylogenetics and Evolution. PMID 26518740 DOI: 10.1016/J.Ympev.2015.10.027  0.92
2015 Leaché AD, Banbury BL, Felsenstein J, de Oca AN, Stamatakis A. Short Tree, Long Tree, Right Tree, Wrong Tree: New Acquisition Bias Corrections for Inferring SNP Phylogenies. Systematic Biology. 64: 1032-47. PMID 26227865 DOI: 10.1093/sysbio/syv053  0.92
2015 Grummer JA, Calderón-Espinosa ML, Nieto-Montes de Oca A, Smith EN, Méndez-de la Cruz FR, Leaché AD. Estimating the temporal and spatial extent of gene flow among sympatric lizard populations (genus Sceloporus) in the southern Mexican highlands. Molecular Ecology. 24: 1523-42. PMID 25712551 DOI: 10.1111/Mec.13122  0.92
2015 Leaché AD, Chavez AS, Jones LN, Grummer JA, Gottscho AD, Linkem CW. Phylogenomics of phrynosomatid lizards: conflicting signals from sequence capture versus restriction site associated DNA sequencing. Genome Biology and Evolution. 7: 706-19. PMID 25663487 DOI: 10.1093/Gbe/Evv026  0.92
2015 Arthofer W, Banbury BL, Carneiro M, Cicconardi F, Duda TF, Harris RB, Kang DS, Leaché AD, Nolte V, Nourisson C, Palmieri N, Schlick-Steiner BC, Schlötterer C, Sequeira F, et al. Genomic resources notes accepted 1 August 2014-30 September 2014. Molecular Ecology Resources. 15: 228-9. PMID 25424247 DOI: 10.1111/1755-0998.12340  0.72
2015 Leaché AD, Linkem CW. Phylogenomics of Horned Lizards (Genus: Phrynosoma) Using Targeted Sequence Capture Data Copeia. 103: 586-594. DOI: 10.1643/Ch-15-248  0.92
2015 Sheldon KS, Leaché AD, Cruz FB. The influence of temperature seasonality on elevational range size across latitude: A test using Liolaemus lizards Global Ecology and Biogeography. 24: 632-641. DOI: 10.1111/geb.12284  0.92
2015 Rockney HJ, Ofori-Boateng C, Porcino N, Leaché AD. A comparison of DNA barcoding markers in West African frogs African Journal of Herpetology. 64: 135-147. DOI: 10.1080/21564574.2015.1114530  0.92
2015 Caviedes-Solis IW, Bouzid NM, Banbury BL, Leaché AD. Uprooting phylogenetic uncertainty in coalescent species delimitation: A meta-analysis of empirical studies Current Zoology. 61: 866-873.  0.92
2014 Leaché AD, Wagner P, Linkem CW, Böhme W, Papenfuss TJ, Chong RA, Lavin BR, Bauer AM, Nielsen SV, Greenbaum E, Rödel MO, Schmitz A, LeBreton M, Ineich I, Chirio L, et al. A hybrid phylogenetic-phylogenomic approach for species tree estimation in African Agama lizards with applications to biogeography, character evolution, and diversification. Molecular Phylogenetics and Evolution. 79: 215-30. PMID 24973715 DOI: 10.1016/J.Ympev.2014.06.013  0.68
2014 Leaché AD, Fujita MK, Minin VN, Bouckaert RR. Species delimitation using genome-wide SNP data. Systematic Biology. 63: 534-42. PMID 24627183 DOI: 10.1093/Sysbio/Syu018  0.92
2014 Leaché AD, Harris RB, Rannala B, Yang Z. The influence of gene flow on species tree estimation: a simulation study. Systematic Biology. 63: 17-30. PMID 23945075 DOI: 10.1093/Sysbio/Syt049  0.92
2014 De Oca ANM, Arenas-Moreno D, Beltrán-Sánchez E, Leaché AD. A new species of horned lizard (genus phrynosoma) from guerrero, México, with an updated multilocus phylogeny Herpetologica. 70: 241-257. DOI: 10.1655/HERPETOLOGICA-D-13-00077  0.92
2014 Wagner P, Leaché A, Mazuch T, Böhme W. Additions to the lizard diversity of the Horn of Africa: Two new species in the Agama spinosa group Amphibia Reptilia. 34: 363-387. DOI: 10.1163/15685381-00002897  0.92
2014 Harris RB, Birks SM, Leaché AD. Incubator birds: Biogeographical origins and evolution of underground nesting in megapodes (Galliformes: Megapodiidae) Journal of Biogeography. 41: 2045-2056. DOI: 10.1111/jbi.12357  0.92
2014 Wagner P, Leaché AD, Fujita MK. Description of four new West African forest geckos of the Hemidactylus fasciatus Gray, 1842 complex, revealed by coalescent species delimitation Bonn Zoological Bulletin. 63: 1-14.  0.92
2013 Leaché AD, Harris RB, Maliska ME, Linkem CW. Comparative species divergence across eight triplets of spiny lizards (Sceloporus) using genomic sequence data. Genome Biology and Evolution. 5: 2410-9. PMID 24259316 DOI: 10.1093/Gbe/Evt186  0.92
2013 Penner J, Adum GB, McElroy MT, Doherty-Bone T, Hirschfeld M, Sandberger L, Weldon C, Cunningham AA, Ohst T, Wombwell E, Portik DM, Reid D, Hillers A, Ofori-Boateng C, Oduro W, et al. West Africa - a safe haven for frogs? A sub-continental assessment of the chytrid fungus (Batrachochytrium dendrobatidis). Plos One. 8: e56236. PMID 23426141 DOI: 10.1371/journal.pone.0056236  0.92
2013 Leaché AD, Palacios JA, Minin VN, Bryson RW. Phylogeography of the Trans-Volcanic bunchgrass lizard (Sceloporus bicanthalis) across the highlands of south-eastern Mexico Biological Journal of the Linnean Society. 110: 852-865. DOI: 10.1111/Bij.12172  0.92
2012 Fujita MK, Leaché AD, Burbrink FT, McGuire JA, Moritz C. Coalescent-based species delimitation in an integrative taxonomy. Trends in Ecology & Evolution. 27: 480-8. PMID 22633974 DOI: 10.1016/J.Tree.2012.04.012  0.92
2012 Rödel MO, Barej MF, Hillers A, Leaché AD, Kouamé NG, Ofori-Boateng C, Assemian NE, Tohé B, Penner J, Hirschfeld M, Doumbia J, Gonwouo LN, Nopper J, Brede C, Diaz R, et al. The genus Astylosternus in the Upper Guinea rainforests, west africa, with the description of a new species (amphibia: Anura: Arthroleptidae) Zootaxa. 1-29. DOI: 10.5281/Zenodo.280508  0.92
2011 Leaché AD. Multi-locus estimates of population structure and migration in a fence lizard hybrid zone. Plos One. 6: e25827. PMID 21980539 DOI: 10.1371/journal.pone.0025827  0.92
2011 Prasad V, Strömberg CA, Leaché AD, Samant B, Patnaik R, Tang L, Mohabey DM, Ge S, Sahni A. Late Cretaceous origin of the rice tribe provides evidence for early diversification in Poaceae. Nature Communications. 2: 480. PMID 21934664 DOI: 10.1038/Ncomms1482  0.92
2011 Leaché AD, Rannala B. The accuracy of species tree estimation under simulation: a comparison of methods. Systematic Biology. 60: 126-37. PMID 21088009 DOI: 10.1093/Sysbio/Syq073  0.92
2011 Fujita MK, Leaché AD. A coalescent perspective on delimiting and naming species: A reply to Bauer et al. Proceedings of the Royal Society B: Biological Sciences. 278: 493-495. DOI: 10.1098/Rspb.2010.1864  0.92
2010 Leaché AD, Fujita MK. Bayesian species delimitation in West African forest geckos (Hemidactylus fasciatus). Proceedings. Biological Sciences / the Royal Society. 277: 3071-7. PMID 20519219 DOI: 10.1098/Rspb.2010.0662  0.92
2010 Leaché AD. Species trees for spiny lizards (genus Sceloporus): identifying points of concordance and conflict between nuclear and mitochondrial data. Molecular Phylogenetics and Evolution. 54: 162-71. PMID 19751840 DOI: 10.1016/j.ympev.2009.09.006  0.92
2010 Blackburn DC, Gvožídk V, Leaché AD. A new squeaker frog (Arthroleptidae: Arthroleptis) from the Mountains of Cameroon and Nigeria Herpetologica. 66: 335-348. DOI: 10.1655/Herpetologica-D-10-00015.1  0.92
2010 Leaché AD, Helmer Ds, Moritz C. Phenotypic evolution in high-elevation populations of western fence lizards (Sceloporus occidentalis) in the Sierra Nevada Mountains Biological Journal of the Linnean Society. 100: 630-641. DOI: 10.1111/J.1095-8312.2010.01462.X  0.92
2009 Leaché AD. Species tree discordance traces to phylogeographic clade boundaries in North American fence lizards (Sceloporus). Systematic Biology. 58: 547-59. PMID 20525608 DOI: 10.1093/sysbio/syp057  0.92
2009 Brandley MC, Warren DL, Leaché AD, McGuire JA. Homoplasy and clade support. Systematic Biology. 58: 184-98. PMID 20525577 DOI: 10.1093/Sysbio/Syp019  0.92
2009 Leaché AD, Sites JW. Chromosome evolution and diversification in North American spiny lizards (genus Sceloporus). Cytogenetic and Genome Research. 127: 166-81. PMID 20203475 DOI: 10.1159/000293285  0.92
2009 Leaché AD, Koo MS, Spencer CL, Papenfuss TJ, Fisher RN, McGuire JA. Quantifying ecological, morphological, and genetic variation to delimit species in the coast horned lizard species complex (Phrynosoma). Proceedings of the National Academy of Sciences of the United States of America. 106: 12418-23. PMID 19625623 DOI: 10.1073/Pnas.0906380106  0.92
2007 Leaché AD, Mulcahy DG. Phylogeny, divergence times and species limits of spiny lizards (Sceloporus magister species group) in western North American deserts and Baja California. Molecular Ecology. 16: 5216-33. PMID 17944851 DOI: 10.1111/J.1365-294X.2007.03556.X  0.92
2007 Leaché AD, Crews SC, Hickerson MJ. Two waves of diversification in mammals and reptiles of Baja California revealed by hierarchical Bayesian analysis. Biology Letters. 3: 646-50. PMID 17698443 DOI: 10.1098/Rsbl.2007.0368  0.92
2007 Leaché AD, Cole CJ. Hybridization between multiple fence lizard lineages in an ecotone: locally discordant variation in mitochondrial DNA, chromosomes, and morphology. Molecular Ecology. 16: 1035-54. PMID 17305859 DOI: 10.1111/j.1365-294X.2006.03194.x  0.92
2006 Angilletta MJ, Oufiero CE, Leaché AD. Direct and indirect effects of environmental temperature on the evolution of reproductive strategies: an information-theoretic approach. The American Naturalist. 168: E123-35. PMID 17004215 DOI: 10.1086/507880  0.92
2006 Brandley MC, Leaché AD, Warren DL, McGuire JA. Are unequal clade priors problematic for Bayesian phylogenetics? Systematic Biology. 55: 138-46; author reply. PMID 16507530 DOI: 10.1080/10635150500431155  0.92
2006 Leaché AD, McGuire JA. Phylogenetic relationships of horned lizards (Phrynosoma) based on nuclear and mitochondrial data: evidence for a misleading mitochondrial gene tree. Molecular Phylogenetics and Evolution. 39: 628-44. PMID 16488160 DOI: 10.1016/J.Ympev.2005.12.016  0.92
2005 Leaché AD. Results of a herpetological survey in Ghana and a new country record Herpetological Review. 36: 16-19.  0.92
2004 Niewiarowski PH, Angilletta MJ, Leaché AD. Phylogenetic comparative analysis of life-history variation among populations of the lizard Sceloporus undulatus: an example and prognosis. Evolution; International Journal of Organic Evolution. 58: 619-33. PMID 15119445  0.92
2002 Leaché AD, Reeder TW. Molecular systematics of the Eastern Fence Lizard (Sceloporus undulatus): a comparison of Parsimony, Likelihood, and Bayesian approaches. Systematic Biology. 51: 44-68. PMID 11943092 DOI: 10.1080/106351502753475871  0.92
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