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Year Citation  Score
2019 Riquet F, Liautard-Haag C, Woodall L, Bouza C, Louisy P, Hamer B, Otero-Ferrer F, Aublanc P, Béduneau V, Briard O, El Ayari T, Hochscheid S, Belkhir K, Arnaud-Haond S, Gagnaire PA, ... Bierne N, et al. Parallel pattern of differentiation at a genomic island shared between clinal and mosaic hybrid zones in a complex of cryptic seahorse lineages. Evolution; International Journal of Organic Evolution. PMID 30854632 DOI: 10.1111/evo.13696  0.48
2018 Gagnaire PA, Lamy JB, Cornette F, Heurtebise S, Dégremont L, Flahauw E, Boudry P, Bierne N, Lapègue S. Analysis of genome-wide differentiation between native and introduced populations of the cupped oysters Crassostrea gigas and Crassostrea angulata. Genome Biology and Evolution. PMID 30184067 DOI: 10.1093/gbe/evy194  0.48
2018 Fraïsse C, Roux C, Gagnaire PA, Romiguier J, Faivre N, Welch JJ, Bierne N. The divergence history of European blue mussel species reconstructed from Approximate Bayesian Computation: the effects of sequencing techniques and sampling strategies. Peerj. 6: e5198. PMID 30083438 DOI: 10.7717/peerj.5198  0.48
2018 Duranton M, Allal F, Fraïsse C, Bierne N, Bonhomme F, Gagnaire PA. Publisher Correction: The origin and remolding of genomic islands of differentiation in the European sea bass. Nature Communications. 9: 3022. PMID 30054471 DOI: 10.1038/s41467-018-05359-2  0.64
2018 Duranton M, Allal F, Fraïsse C, Bierne N, Bonhomme F, Gagnaire PA. The origin and remolding of genomic islands of differentiation in the European sea bass. Nature Communications. 9: 2518. PMID 29955054 DOI: 10.1038/s41467-018-04963-6  0.64
2016 Bierne N, Bonhomme F, Arnaud-Haond S. Dedicated population genomics for the silent world: the specific questions of marine population genetics. Current Zoology. 62: 545-550. PMID 29491944 DOI: 10.1093/cz/zow107  0.64
2016 Szulkin M, Gagnaire PA, Bierne N, Charmantier A. Population genomic footprints of fine-scale differentiation between habitats in Mediterranean blue tits Molecular Ecology. 25: 542-558. DOI: 10.1111/mec.13486  1
2015 Sussarellu R, Huvet A, Lapègue S, Quillen V, Lelong C, Cornette F, Jensen LF, Bierne N, Boudry P. Additive transcriptomic variation associated with reproductive traits suggest local adaptation in a recently settled population of the Pacific oyster, Crassostrea gigas. Bmc Genomics. 16: 808. PMID 26483072 DOI: 10.1186/s12864-015-1972-8  1
2015 Gagnaire PA, Broquet T, Aurelle D, Viard F, Souissi A, Bonhomme F, Arnaud-Haond S, Bierne N. Using neutral, selected, and hitchhiker loci to assess connectivity of marine populations in the genomic era. Evolutionary Applications. 8: 769-86. PMID 26366195 DOI: 10.1111/eva.12288  0.64
2015 Fraïsse C, Belkhir K, Welch JJ, Bierne N. Local interspecies introgression is the main cause of extreme levels of intraspecific differentiation in mussels. Molecular Ecology. PMID 26137909 DOI: 10.1111/mec.13299  1
2015 Gérard K, Roby C, Bierne N, Borsa P, Féral JP, Chenuil A. Does natural selection explain the fine scale genetic structure at the nuclear exon Glu-5' in blue mussels from Kerguelen? Ecology and Evolution. 5: 1456-73. PMID 25897385 DOI: 10.1002/ece3.1421  1
2015 Gagnaire PA, Broquet T, Aurelle D, Viard F, Souissi A, Bonhomme F, Arnaud-Haond S, Bierne N. Using neutral, selected, and hitchhiker loci to assess connectivity of marine populations in the genomic era Evolutionary Applications. DOI: 10.1111/eva.12288  1
2014 Tine M, Kuhl H, Gagnaire PA, Louro B, Desmarais E, Martins RS, Hecht J, Knaust F, Belkhir K, Klages S, Dieterich R, Stueber K, Piferrer F, Guinand B, Bierne N, et al. European sea bass genome and its variation provide insights into adaptation to euryhalinity and speciation. Nature Communications. 5: 5770. PMID 25534655 DOI: 10.1038/ncomms6770  0.64
2014 Romiguier J, Gayral P, Ballenghien M, Bernard A, Cahais V, Chenuil A, Chiari Y, Dernat R, Duret L, Faivre N, Loire E, Lourenco JM, Nabholz B, Roux C, Tsagkogeorga G, ... ... Bierne N, et al. Comparative population genomics in animals uncovers the determinants of genetic diversity. Nature. 515: 261-3. PMID 25141177 DOI: 10.1038/nature13685  1
2014 Roux C, Fraïsse C, Castric V, Vekemans X, Pogson GH, Bierne N. Can we continue to neglect genomic variation in introgression rates when inferring the history of speciation? A case study in a Mytilus hybrid zone. Journal of Evolutionary Biology. 27: 1662-75. PMID 24913446 DOI: 10.1111/jeb.12425  1
2014 Gosset CC, Do Nascimento J, Augé MT, Bierne N. Evidence for adaptation from standing genetic variation on an antimicrobial peptide gene in the mussel Mytilus edulis. Molecular Ecology. 23: 3000-12. PMID 24805928 DOI: 10.1111/mec.12784  1
2014 Fraïsse C, Roux C, Welch JJ, Bierne N. Gene-flow in a mosaic hybrid zone: is local introgression adaptive? Genetics. 197: 939-51. PMID 24788603 DOI: 10.1534/genetics.114.161380  1
2013 Plouviez S, Faure B, Le Guen D, Lallier FH, Bierne N, Jollivet D. A new barrier to dispersal trapped old genetic clines that escaped the Easter Microplate tension zone of the Pacific vent mussels. Plos One. 8: e81555. PMID 24312557 DOI: 10.1371/journal.pone.0081555  1
2013 Rohfritsch A, Bierne N, Boudry P, Heurtebise S, Cornette F, Lapègue S. Population genomics shed light on the demographic and adaptive histories of European invasion in the Pacific oyster, Crassostrea gigas. Evolutionary Applications. 6: 1064-78. PMID 24187588 DOI: 10.1111/eva.12086  1
2013 Bierne N, Roze D, Welch JJ. Pervasive selection or is it…? Why are FST outliers sometimes so frequent? Molecular Ecology. 22: 2061-4. PMID 23671920 DOI: 10.1111/mec.12241  1
2013 Gayral P, Melo-Ferreira J, Glémin S, Bierne N, Carneiro M, Nabholz B, Lourenco JM, Alves PC, Ballenghien M, Faivre N, Belkhir K, Cahais V, Loire E, Bernard A, Galtier N. Reference-free population genomics from next-generation transcriptome data and the vertebrate-invertebrate gap. Plos Genetics. 9: e1003457. PMID 23593039 DOI: 10.1371/journal.pgen.1003457  1
2013 Roux C, Tsagkogeorga G, Bierne N, Galtier N. Crossing the species barrier: genomic hotspots of introgression between two highly divergent Ciona intestinalis species. Molecular Biology and Evolution. 30: 1574-87. PMID 23564941 DOI: 10.1093/molbev/mst066  1
2013 Harrang E, Lapègue S, Morga B, Bierne N. A high load of non-neutral amino-acid polymorphisms explains high protein diversity despite moderate effective population size in a marine bivalve with sweepstakes reproduction. G3 (Bethesda, Md.). 3: 333-41. PMID 23390609 DOI: 10.1534/g3.112.005181  1
2013 Abbott R, Albach D, Ansell S, Arntzen JW, Baird SJ, Bierne N, Boughman J, Brelsford A, Buerkle CA, Buggs R, Butlin RK, Dieckmann U, Eroukhmanoff F, Grill A, Cahan SH, et al. Hybridization and speciation. Journal of Evolutionary Biology. 26: 229-46. PMID 23323997 DOI: 10.1111/j.1420-9101.2012.02599.x  1
2013 Riquet F, Daguin-Thiébaut C, Ballenghien M, Bierne N, Viard F. Contrasting patterns of genome-wide polymorphism in the native and invasive range of the marine mollusc Crepidula fornicata. Molecular Ecology. 22: 1003-18. PMID 23286428 DOI: 10.1111/mec.12161  1
2013 Gosset CC, Bierne N. Differential introgression from a sister species explains high F(ST) outlier loci within a mussel species. Journal of Evolutionary Biology. 26: 14-26. PMID 23199184 DOI: 10.1111/jeb.12046  1
2013 d'Alençon E, Bierne N, Girard PA, Magdelenat G, Gimenez S, Seninet I, Escoubas JM. Evolutionary history of x-tox genes in three lepidopteran species: origin, evolution of primary and secondary structure and alternative splicing, generating a repertoire of immune-related proteins. Insect Biochemistry and Molecular Biology. 43: 54-64. PMID 23142192 DOI: 10.1016/j.ibmb.2012.10.012  1
2013 Bierne N, Gagnaire PA, David P. The geography of introgression in a patchy environment and the thorn in the side of ecological speciation Current Zoology. 59: 72-86.  1
2012 Pante E, Rohfritsch A, Becquet V, Belkhir K, Bierne N, Garcia P. SNP detection from de novo transcriptome sequencing in the bivalve Macoma balthica: marker development for evolutionary studies. Plos One. 7: e52302. PMID 23300636 DOI: 10.1371/journal.pone.0052302  1
2012 Hamer B, Korlevi? M, Durmiši E, Nerlovi? V, Bierne N. Nuclear marker Me 15/16 analyses of Mytilus galloprovincialis populations along the eastern Adriatic coast Cahiers De Biologie Marine. 53: 35-44.  1
2011 Bierne N, Welch J, Loire E, Bonhomme F, David P. The coupling hypothesis: why genome scans may fail to map local adaptation genes. Molecular Ecology. 20: 2044-72. PMID 21476991 DOI: 10.1111/j.1365-294X.2011.05080.x  1
2010 Bierne N. The distinctive footprints of local hitchhiking in a varied environment and global hitchhiking in a subdivided population. Evolution; International Journal of Organic Evolution. 64: 3254-72. PMID 20550573 DOI: 10.1111/j.1558-5646.2010.01050.x  1
2010 Szulkin M, Bierne N, David P. Heterozygosity-fitness correlations: a time for reappraisal. Evolution; International Journal of Organic Evolution. 64: 1202-17. PMID 20148954 DOI: 10.1111/j.1558-5646.2010.00966.x  1
2009 Faure B, Jollivet D, Tanguy A, Bonhomme F, Bierne N. Speciation in the deep sea: multi-locus analysis of divergence and gene flow between two hybridizing species of hydrothermal vent mussels. Plos One. 4: e6485. PMID 19649261 DOI: 10.1371/journal.pone.0006485  1
2009 Boon E, Faure MF, Bierne N. The flow of antimicrobial peptide genes through a genetic barrier between Mytilus edulis and M. galloprovincialis. Journal of Molecular Evolution. 68: 461-74. PMID 19357802 DOI: 10.1007/s00239-009-9211-z  1
2008 Gérard K, Bierne N, Borsa P, Chenuil A, Féral JP. Pleistocene separation of mitochondrial lineages of Mytilus spp. mussels from Northern and Southern Hemispheres and strong genetic differentiation among southern populations. Molecular Phylogenetics and Evolution. 49: 84-91. PMID 18678263 DOI: 10.1016/j.ympev.2008.07.006  1
2008 Faure MF, David P, Bonhomme F, Bierne N. Genetic hitchhiking in a subdivided population of Mytilus edulis. Bmc Evolutionary Biology. 8: 164. PMID 18513403 DOI: 10.1186/1471-2148-8-164  1
2008 Tanguy A, Bierne N, Saavedra C, Pina B, Bachère E, Kube M, Bazin E, Bonhomme F, Boudry P, Boulo V, Boutet I, Cancela L, Dossat C, Favrel P, Huvet A, et al. Increasing genomic information in bivalves through new EST collections in four species: development of new genetic markers for environmental studies and genome evolution. Gene. 408: 27-36. PMID 18054177 DOI: 10.1016/j.gene.2007.10.021  1
2007 Faure B, Bierne N, Tanguy A, Bonhomme F, Jollivet D. Evidence for a slightly deleterious effect of intron polymorphisms at the EF1alpha gene in the deep-sea hydrothermal vent bivalve Bathymodiolus. Gene. 406: 99-107. PMID 17707599 DOI: 10.1016/j.gene.2007.06.025  1
2007 Sauvage C, Bierne N, Lapègue S, Boudry P. Single Nucleotide polymorphisms and their relationship to codon usage bias in the Pacific oyster Crassostrea gigas. Gene. 406: 13-22. PMID 17616269 DOI: 10.1016/j.gene.2007.05.011  1
2007 Bierne N, Tanguy A, Faure M, Faure B, David E, Boutet I, Boon E, Quere N, Plouviez S, Kemppainen P, Jollivet D, Moraga D, Boudry P, David P. Mark-recapture cloning: A straightforward and cost-effective cloning method for population genetics of single-copy nuclear DNA sequences in diploids Molecular Ecology Notes. 7: 562-566. DOI: 10.1111/j.1471-8286.2007.01685.x  1
2007 Borsa P, Daguin C, Bierne N. Genomic reticulation indicates mixed ancestry in Southern-Hemisphere Mytilus spp. mussels Biological Journal of the Linnean Society. 92: 747-754. DOI: 10.1111/j.1095-8312.2007.00917.x  1
2006 Bierne N, Bonhomme F, Boudry P, Szulkin M, David P. Fitness landscapes support the dominance theory of post-zygotic isolation in the mussels Mytilus edulis and M. galloprovincialis. Proceedings. Biological Sciences / the Royal Society. 273: 1253-60. PMID 16720399 DOI: 10.1098/rspb.2005.3440  1
2006 Bierne N, Eyre-Walker A. Variation in synonymous codon use and DNA polymorphism within the Drosophila genome. Journal of Evolutionary Biology. 19: 1-11. PMID 16405571 DOI: 10.1111/j.1420-9101.2005.00996.x  1
2006 Galtier N, Bazin E, Bierne N. GC-biased segregation of noncoding polymorphisms in Drosophila. Genetics. 172: 221-8. PMID 16157668 DOI: 10.1534/genetics.105.046524  1
2004 Bierne N, Eyre-Walker A. The genomic rate of adaptive amino acid substitution in Drosophila. Molecular Biology and Evolution. 21: 1350-60. PMID 15044594 DOI: 10.1093/molbev/msh134  1
2003 Bierne N, Eyre-Walker A. The problem of counting sites in the estimation of the synonymous and nonsynonymous substitution rates: implications for the correlation between the synonymous substitution rate and codon usage bias. Genetics. 165: 1587-97. PMID 14668405  1
2003 Bierne N, Bonhomme F, David P. Habitat preference and the marine-speciation paradox. Proceedings. Biological Sciences / the Royal Society. 270: 1399-406. PMID 12965032 DOI: 10.1098/rspb.2003.2404  1
2003 Bierne N, Daguin C, Bonhomme F, David P, Borsa P. Direct selection on allozymes is not required to explain heterogeneity among marker loci across a Mytilus hybrid zone. Molecular Ecology. 12: 2505-10. PMID 12919488 DOI: 10.1046/j.1365-294X.2003.01936.x  1
2003 Bierne N, Borsa P, Daguin C, Jollivet D, Viard F, Bonhomme F, David P. Introgression patterns in the mosaic hybrid zone between Mytilus edulis and M. galloprovincialis. Molecular Ecology. 12: 447-61. PMID 12535095 DOI: 10.1046/j.1365-294X.2003.01730.x  1
2002 Bierne N, Lenormand T, Bonhomme F, David P. Deleterious mutations in a hybrid zone: can mutational load decrease the barrier to gene flow? Genetical Research. 80: 197-204. PMID 12688658 DOI: 10.1017/S001667230200592X  1
2002 Bierne N, David P, Boudry P, Bonhomme F. Assortative fertilization and selection at larval stage in the mussels Mytilus edulis and M. galloprovincialis. Evolution; International Journal of Organic Evolution. 56: 292-8. PMID 11926497  1
2002 Bierne N, David P, Langlade A, Bonhomme F. Can habitat specialisation maintain a mosaic hybrid zone in marine bivalves? Marine Ecology Progress Series. 245: 157-170.  1
2001 Huvet A, Balabaud K, Bierne N, Boudry P. Microsatellite analysis of 6-hour-old embryos reveals no preferential intraspecific fertilization between cupped oysters Crassostrea gigas and Crassostrea angulata. Marine Biotechnology (New York, N.Y.). 3: 448-53. PMID 14961337 DOI: 10.1007/s10126-001-0017-2  1
2000 Bierne N, Tsitrone A, David P. An inbreeding model of associative overdominance during a population bottleneck. Genetics. 155: 1981-90. PMID 10924490  1
2000 Bierne N, Lehnert SA, Bédier E, Bonhomme F, Moore SS. Screening for intron-length polymorphisms in penaeid shrimps using exon-primed intron-crossing (EPIC)-PCR. Molecular Ecology. 9: 233-5. PMID 10672168 DOI: 10.1046/j.1365-294X.2000.00842.x  1
2000 Bierne N, Beuzart I, Vonau V, Bonhomme F, Bédier E. Microsatellite-associated heterosis in hatchery-propagated stocks of the shrimp Penaeus stylirostris Aquaculture. 184: 203-219. DOI: 10.1016/S0044-8486(99)00331-2  1
1999 Vonau V, Ohresser M, Bierne N, Delsert C, Beuzart I, Bedier E, Bonhomme F. Three polymorphic microsatellites in the shrimp Penaeus stylirostris. Animal Genetics. 30: 234-5. PMID 10443002  1
1998 Bierne N, Launey S, Naciri-Graven Y, Bonhomme F. Early effect of inbreeding as revealed by microsatellite analyses on Ostrea edulis larvae. Genetics. 148: 1893-906. PMID 9560403  1
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