Ylenia Chiari, Ph.D. - Publications

Affiliations: 
2014- Biology University of South Alabama, Mobile, AL, United States 
Area:
Reptile evolution, morphology, behavior, genomics
Website:
http://www.yleniachiari.it/

45 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Chiari Y, Howard L, Moreno N, Relyea S, Dunnigan J, Boyer MC, Kardos M, Glaberman S, Luikart G. Influence of RNA-Seq library construction, sampling methods, and tissue harvesting time on gene expression estimation. Molecular Ecology Resources. PMID 36704853 DOI: 10.1111/1755-0998.13757  0.556
2022 Moreno N, Heaton A, Bruening K, Milligan E, Nelson D, Glaberman S, Chiari Y. Hybridization and low genetic diversity in the endangered Alabama red-bellied turtle (). Ecology and Evolution. 12: e8964. PMID 35784082 DOI: 10.1002/ece3.8964  0.685
2022 Jensen EL, Quinzin MC, Miller JM, Russello MA, Garrick RC, Edwards DL, Glaberman S, Chiari Y, Poulakakis N, Tapia W, Gibbs JP, Caccone A. A new lineage of Galapagos giant tortoises identified from museum samples. Heredity. PMID 35217806 DOI: 10.1038/s41437-022-00510-8  0.364
2022 Roy R, Moreno N, Brockman SA, Kostanecki A, Zambre A, Holl C, Solhaug EM, Minami A, Snell-Rood EC, Hampton M, Bee MA, Chiari Y, Hegeman AD, Carter CJ. Convergent evolution of a blood-red nectar pigment in vertebrate-pollinated flowers. Proceedings of the National Academy of Sciences of the United States of America. 119. PMID 35074876 DOI: 10.1073/pnas.2114420119  0.565
2021 Glimm T, Kiskowski M, Moreno N, Chiari Y. Capturing and analyzing pattern diversity: an example using the melanistic spotted patterns of leopard geckos. Peerj. 9: e11829. PMID 34595062 DOI: 10.7717/peerj.11829  0.565
2019 Allen W, Moreno N, Gamble T, Chiari Y. Ecological, behavioral and phylogenetic influences on the evolution of dorsal color pattern in geckos. Evolution; International Journal of Organic Evolution. PMID 31886521 DOI: 10.1111/Evo.13915  0.6
2019 Kiskowski M, Glimm T, Moreno N, Gamble T, Chiari Y. Isolating and quantifying the role of developmental noise in generating phenotypic variation. Plos Computational Biology. 15: e1006943. PMID 31009449 DOI: 10.1371/Journal.Pcbi.1006943  0.598
2018 Quesada V, Freitas-Rodríguez S, Miller J, Pérez-Silva JG, Jiang ZF, Tapia W, Santiago-Fernández O, Campos-Iglesias D, Kuderna LFK, Quinzin M, Álvarez MG, Carrero D, Beheregaray LB, Gibbs JP, Chiari Y, et al. Giant tortoise genomes provide insights into longevity and age-related disease. Nature Ecology & Evolution. PMID 30510174 DOI: 10.1038/S41559-018-0733-X  0.347
2018 Hylton A, Chiari Y, Capellini I, Barron MG, Glaberman S. Mixed phylogenetic signal in fish toxicity data across chemical classes. Ecological Applications : a Publication of the Ecological Society of America. 28: 605-611. PMID 29676862 DOI: 10.1002/Eap.1698  0.396
2018 Sykora P, Chiari Y, Heaton A, Moreno N, Glaberman S, Sobol RW. Application of the CometChip platform to assess DNA damage in field-collected blood samples from turtles. Environmental and Molecular Mutagenesis. PMID 29536573 DOI: 10.1002/Em.22183  0.601
2017 Chiari Y, van der Meijden A, Caccone A, Claude J, Gilles B. Self-righting potential and the evolution of shell shape in Galápagos tortoises. Scientific Reports. 7: 15828. PMID 29192279 DOI: 10.1038/S41598-017-15787-7  0.647
2016 Chiari Y, Glaberman S, Tarroso P, Caccone A, Claude J. Ecological and evolutionary influences on body size and shape in the Galápagos marine iguana (Amblyrhynchus cristatus). Oecologia. 181: 885-94. PMID 27041683 DOI: 10.1007/S00442-016-3618-1  0.415
2016 Martin DL, Chiari Y, Boone E, Sherman TD, Ross C, Wyllie-Echeverria S, Gaydos JK, Boettcher AA. Functional, Phylogenetic and Host-Geographic Signatures of Labyrinthula spp. Provide for Putative Species Delimitation and a Global-Scale View of Seagrass Wasting Disease Estuaries and Coasts. 1-19. DOI: 10.1007/S12237-016-0087-Z  0.41
2016 Chiari Y, Glaberman S, Tarroso P, Caccone A, Claude J. Ecological and evolutionary influences on body size and shape in the Galápagos marine iguana (Amblyrhynchus cristatus) Oecologia. 1-10. DOI: 10.1007/s00442-016-3618-1  0.305
2015 Poulakakis N, Edwards DL, Chiari Y, Garrick RC, Russello MA, Benavides E, Watkins-Colwell GJ, Glaberman S, Tapia W, Gibbs JP, Cayot LJ, Caccone A. Description of a New Galapagos Giant Tortoise Species (Chelonoidis; Testudines: Testudinidae) from Cerro Fatal on Santa Cruz Island. Plos One. 10: e0138779. PMID 26488886 DOI: 10.1371/Journal.Pone.0138779  0.545
2015 Chiari Y, Glaberman S, Serén N, Carretero MA, Capellini I. Phylogenetic signal in amphibian sensitivity to copper sulfate relative to experimental temperature. Ecological Applications : a Publication of the Ecological Society of America. 25: 596-602. PMID 26214907 DOI: 10.1890/14-0439.1  0.416
2014 Romiguier J, Gayral P, Ballenghien M, Bernard A, Cahais V, Chenuil A, Chiari Y, Dernat R, Duret L, Faivre N, Loire E, Lourenco JM, Nabholz B, Roux C, Tsagkogeorga G, et al. Comparative population genomics in animals uncovers the determinants of genetic diversity. Nature. 515: 261-3. PMID 25141177 DOI: 10.1038/Nature13685  0.528
2014 Serén N, Glaberman S, Carretero MA, Chiari Y. Molecular evolution and functional divergence of the metallothionein gene family in vertebrates. Journal of Molecular Evolution. 78: 217-33. PMID 24557429 DOI: 10.1007/S00239-014-9612-5  0.356
2013 Loire E, Chiari Y, Bernard A, Cahais V, Romiguier J, Nabholz B, Lourenço JM, Galtier N. Population genomics of the endangered giant Galápagos tortoise. Genome Biology. 14: R136. PMID 24342523 DOI: 10.1186/Gb-2013-14-12-R136  0.497
2013 Lourenço JM, Glémin S, Chiari Y, Galtier N. The determinants of the molecular substitution process in turtles. Journal of Evolutionary Biology. 26: 38-50. PMID 23176666 DOI: 10.1111/Jeb.12031  0.418
2013 Chiari Y, Meijden Avd, Mucedda M, Wagner N, Veith M. No detection of the pathogen Batrachochytrium dendrobatidis in Sardinian cave salamanders, genus Hydromantes Amphibia-Reptilia. 34: 136-141. DOI: 10.1163/15685381-00002876  0.341
2013 Orozco-terWengel P, Chiari Y, Vieites DR, Pedrono M, Louis E. Isolation and characterization of six polymorphic microsatellite loci for the Malagasy spider tortoise, Pyxis arachnoides and cross-amplification in Pyxis planicauda Amphibia-Reptilia. 34: 125-128. DOI: 10.1163/15685381-00002866  0.478
2012 Chiari Y, Cahais V, Galtier N, Delsuc F. Phylogenomic analyses support the position of turtles as the sister group of birds and crocodiles (Archosauria). Bmc Biology. 10: 65. PMID 22839781 DOI: 10.1186/1741-7007-10-65  0.433
2012 Cahais V, Gayral P, Tsagkogeorga G, Melo-Ferreira J, Ballenghien M, Weinert L, Chiari Y, Belkhir K, Ranwez V, Galtier N. Reference-free transcriptome assembly in non-model animals from next-generation sequencing data. Molecular Ecology Resources. 12: 834-45. PMID 22540679 DOI: 10.1111/J.1755-0998.2012.03148.X  0.396
2012 Chiari Y, van der Meijden A, Mucedda M, Lourenço JM, Hochkirch A, Veith M. Phylogeography of Sardinian cave salamanders (genus Hydromantes) is mainly determined by geomorphology. Plos One. 7: e32332. PMID 22427830 DOI: 10.1371/Journal.Pone.0032332  0.753
2012 Chiari Y, Claude J. Morphometric identification of individuals when there are more shape variables than reference specimens: a case study in Galápagos tortoises. Comptes Rendus Biologies. 335: 62-8. PMID 22226164 DOI: 10.1016/J.Crvi.2011.10.007  0.328
2012 Lourenço JM, Claude J, Galtier N, Chiari Y. Dating cryptodiran nodes: origin and diversification of the turtle superfamily Testudinoidea. Molecular Phylogenetics and Evolution. 62: 496-507. PMID 22100825 DOI: 10.1016/J.Ympev.2011.10.022  0.408
2011 Gayral P, Weinert L, Chiari Y, Tsagkogeorga G, Ballenghien M, Galtier N. Next-generation sequencing of transcriptomes: a guide to RNA isolation in nonmodel animals. Molecular Ecology Resources. 11: 650-61. PMID 21481219 DOI: 10.1111/J.1755-0998.2011.03010.X  0.319
2011 Chiari Y, Claude J. Study of the carapace shape and growth in two Galápagos tortoise lineages. Journal of Morphology. 272: 379-86. PMID 21246597 DOI: 10.1002/Jmor.10923  0.369
2010 Chiari Y, Dion K, Colborn J, Parmakelis A, Powell JR. On the possible role of tRNA base modifications in the evolution of codon usage: queuosine and Drosophila. Journal of Molecular Evolution. 70: 339-45. PMID 20333371 DOI: 10.1007/S00239-010-9329-Z  0.313
2009 Chiari Y, van der Meijden A, Madsen O, Vences M, Meyer A. Base composition, selection, and phylogenetic significance of indels in the recombination activating gene-1 in vertebrates. Frontiers in Zoology. 6: 32. PMID 20015384 DOI: 10.1186/1742-9994-6-32  0.744
2009 Chiari Y, Hyseni C, Fritts TH, Glaberman S, Marquez C, Gibbs JP, Claude J, Caccone A. Morphometrics parallel genetics in a newly discovered and endangered taxon of Galápagos tortoise. Plos One. 4: e6272. PMID 19609441 DOI: 10.1371/Journal.Pone.0006272  0.44
2009 van der Meijden A, Chiari Y, Mucedda M, Carranza S, Corti C, Veith M. Phylogenetic relationships of Sardinian cave salamanders, genus Hydromantes, based on mitochondrial and nuclear DNA sequence data. Molecular Phylogenetics and Evolution. 51: 399-404. PMID 19136065 DOI: 10.1016/J.Ympev.2008.12.011  0.736
2009 CHIARI Y, VIEITES DR, GUO J, BORA P, VENCES M. High haplotype diversity in a microendemic Malagasy gecko species, Lygodactylus mirabilis (Pasteur, 1962) Zootaxa. 2269: 43-52. DOI: 10.11646/Zootaxa.2269.1.3  0.695
2008 CROTTINI A, CHIARI Y, MERCURIO V, MEYER A, VENCES M, ANDREONE F. Into the canyons: The phylogeography of the Malagasy frogs Mantella expectata and Scaphiophryne gottlebei in the arid Isalo Massif, and its significance for conservation (Amphibia: Mantellidae and Microhylidae) Organisms Diversity & Evolution. 8: 368-377. DOI: 10.1016/J.Ode.2008.08.001  0.771
2007 Rabemananjara FC, Chiari Y, Ramilijaona OR, Vences M. Evidence for recent gene flow between north-eastern and south-eastern Madagascan poison frogs from a phylogeography of the Mantella cowani group. Frontiers in Zoology. 4: 1. PMID 17207286 DOI: 10.1186/1742-9994-4-1  0.674
2007 RABEMANANJARA FC, CROTTINI A, CHIARI Y, ANDREONE F, GLAW F, DUGUET R, BORA P, RAMILIJAONA OR, VENCES M. Molecular systematics of Malagasy poison frogs in the Mantella betsileo and  M. laevigata species groups Zootaxa. 1501: 31-44. DOI: 10.11646/Zootaxa.1501.1.2  0.662
2007 Vargas-Ramírez M, Chiari Y, Castaño-Mora OV, Menken SBJ. Low genetic variability in the endangered Colombian endemic freshwater turtle Podocnemis lewyana (Testudines, Podocnemididae) Contributions to Zoology. 76: 1-7. DOI: 10.1163/18759866-07601001  0.546
2006 Vieites DR, Chiari Y, Vences M, Andreone F, Rabemananjara F, Bora P, Nieto-Román S, Meyer A. Mitochondrial evidence for distinct phylogeographic units in the endangered Malagasy poison frog Mantella bernhardi. Molecular Ecology. 15: 1617-25. PMID 16629815 DOI: 10.1111/J.1365-294X.2006.02874.X  0.762
2006 John Measey G, Vences M, Drewes RC, Chiari Y, Melo M, Bourles B. ORIGINAL ARTICLE: Freshwater paths across the ocean: molecular phylogeny of the frog Ptychadena newtoni gives insights into amphibian colonization of oceanic islands Journal of Biogeography. 34: 7-20. DOI: 10.1111/J.1365-2699.2006.01589.X  0.675
2006 Chiari Y, Andreone F, Vences M, Meyer A. Genetic variation of an endangered Malagasy frog, Mantella cowani, and its phylogeographic relationship to the widespread M. baroni Conservation Genetics. 6: 1041-1047. DOI: 10.1007/S10592-005-9085-6  0.756
2006 Chiari Y, Orozco-terWengel P, Vences M, Vieites DR, Sarovy A, Randrianirina JE, Meyer A, Louis E. Genetic identification of units for conservation in tomato frogs, genus Dyscophus Conservation Genetics. 7: 473-482. DOI: 10.1007/S10592-005-9057-X  0.699
2005 Vences M, Thomas M, van der Meijden A, Chiari Y, Vieites DR. Comparative performance of the 16S rRNA gene in DNA barcoding of amphibians. Frontiers in Zoology. 2: 5. PMID 15771783 DOI: 10.1186/1742-9994-2-5  0.765
2004 Chiari Y, Vences M, Vieites DR, Rabemananjara F, Bora P, Ramilijaona Ravoahangimalala O, Meyer A. New evidence for parallel evolution of colour patterns in Malagasy poison frogs (Mantella). Molecular Ecology. 13: 3763-74. PMID 15548289 DOI: 10.1111/J.1365-294X.2004.02367.X  0.763
2004 Vences M, Chiari Y, Raharivololoniaina L, Meyer A. High mitochondrial diversity within and among populations of Malagasy poison frogs. Molecular Phylogenetics and Evolution. 30: 295-307. PMID 14715222 DOI: 10.1016/S1055-7903(03)00217-3  0.74
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