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Keylie Gibson - Publications

Affiliations: 
Computational Biology Institute George Washington University, Washington, DC, United States 
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14 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Bendall ML, Gibson KM, Steiner MC, Rentia U, Pérez-Losada M, Crandall KA. HAPHPIPE: Haplotype Reconstruction and Phylodynamics for Deep Sequencing of Intra-Host Viral Populations. Molecular Biology and Evolution. PMID 33367849 DOI: 10.1093/molbev/msaa315  0.709
2020 Gibson KM, Steiner MC, Rentia U, Bendall ML, Pérez-Losada M, Crandall KA. Validation of Variant Assembly Using HAPHPIPE with Next-Generation Sequence Data from Viruses. Viruses. 12. PMID 32674515 DOI: 10.3390/V12070758  0.719
2020 Hoque MN, Istiaq A, Clement RA, Gibson KM, Saha O, Islam OK, Abir RA, Sultana M, Siddiki AZ, Crandall KA, Hossain MA. Insights Into the Resistome of Bovine Clinical Mastitis Microbiome, a Key Factor in Disease Complication. Frontiers in Microbiology. 11: 860. PMID 32582039 DOI: 10.3389/Fmicb.2020.00860  0.657
2020 Steiner MC, Gibson KM, Crandall KA. Drug Resistance Prediction Using Deep Learning Techniques on HIV-1 Sequence Data. Viruses. 12. PMID 32438586 DOI: 10.3390/V12050560  0.502
2020 Gibson KM, Jair K, Castel AD, Bendall ML, Wilbourn B, Jordan JA, Crandall KA, Pérez-Losada M. Author Correction: A cross-sectional study to characterize local HIV-1 dynamics in Washington, DC using next-generation sequencing. Scientific Reports. 10: 7099. PMID 32317740 DOI: 10.1038/S41598-020-63859-Y  0.683
2020 Eliseev A, Gibson KM, Avdeyev P, Novik D, Bendall ML, Pérez-Losada M, Alexeev N, Crandall KA. Evaluation of haplotype callers for next-generation sequencing of viruses. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. 104277. PMID 32151775 DOI: 10.1016/J.Meegid.2020.104277  0.705
2020 Gibson KM, Jair K, Castel AD, Bendall ML, Wilbourn B, Jordan JA, Crandall KA, Pérez-Losada M. A cross-sectional study to characterize local HIV-1 dynamics in Washington, DC using next-generation sequencing. Scientific Reports. 10: 1989. PMID 32029767 DOI: 10.1038/S41598-020-58410-Y  0.7
2020 Mani J, Lee NP, DeHart H, Gibson KM, Schulkers K, Robertson M, Deopujari V, Levy S, Baveja R, Baker RJ, Crandall KA, Hourigan SK. Tu1929 ANTIMICROBIAL RESISTANCE GENE BURDEN DECREASES OVER TIME IN PRETERM INFANTS RECEIVING BREAST MILK Gastroenterology. 158: S-1222. DOI: 10.1016/S0016-5085(20)33716-1  0.378
2019 Gibson KM, Steiner MC, Kassaye S, Maldarelli F, Grossman Z, Pérez-Losada M, Crandall KA. Corrigendum: A 28-Year History of HIV-1 Drug Resistance and Transmission in Washington, DC. Frontiers in Microbiology. 10: 2590. PMID 31787961 DOI: 10.3389/Fmicb.2019.02590  0.486
2019 Hourigan SK, Ahn M, Gibson KM, Pérez-Losada M, Felix G, Weidner M, Leibowitz I, Niederhuber JE, Sears CL, Crandall KA, Oliva-Hemker M. Fecal Transplant in Children With Gives Sustained Reduction in Antimicrobial Resistance and Potential Pathogen Burden. Open Forum Infectious Diseases. 6: ofz379. PMID 31660343 DOI: 10.1093/Ofid/Ofz379  0.428
2019 Gibson KM, Nguyen BN, Neumann LM, Miller M, Buss P, Daniels S, Ahn MJ, Crandall KA, Pukazhenthi B. Gut microbiome differences between wild and captive black rhinoceros - implications for rhino health. Scientific Reports. 9: 7570. PMID 31138833 DOI: 10.1038/S41598-019-43875-3  0.621
2019 Gibson KM, Steiner MC, Kassaye S, Maldarelli F, Grossman Z, Pérez-Losada M, Crandall KA. A 28-Year History of HIV-1 Drug Resistance and Transmission in Washington, DC. Frontiers in Microbiology. 10: 369. PMID 30906285 DOI: 10.3389/Fmicb.2019.00369  0.552
2018 Hahn A, Bendall ML, Gibson KM, Chaney H, Sami I, Perez GF, Koumbourlis AC, McCaffrey TA, Freishtat RJ, Crandall KA. Benchmark Evaluation of True Single Molecular Sequencing to Determine Cystic Fibrosis Airway Microbiome Diversity. Frontiers in Microbiology. 9: 1069. PMID 29887843 DOI: 10.3389/Fmicb.2018.01069  0.678
2018 Hourigan SK, Ahn M, Gibson K, Perez-Losada M, Felix G, Weidner MN, Leibowitz I, Niederhuber JE, Sears CL, Crandall KA, Oliva-Hemker M. 27 - Longitudinal Sustained Microbiome Changes with Fecal Microbiota Transplantation in Children with Recurrent Clostridium Difficile Infection Revealed by Shotgun Metagenomic Sequencing Gastroenterology. 154: S-9-S-10. DOI: 10.1016/S0016-5085(18)30516-X  0.51
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