Juan C Opazo, Ph.D - Publications

Affiliations: 
Instituto de Ciencias Ambientales y Evolutivas Universidad Austral de Chile, Valdivia, Región de los Ríos, Chile 
Area:
Evolution of vertebrate genomes
Website:
http://www.opazolab.cl/Juan_C._Opazo/People.html

56 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any innacuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Opazo JC, Zavala K. Phylogenetic evidence for independent origins of GDF1 and GDF3 genes in anurans and mammals. Scientific Reports. 8: 13595. PMID 30206386 DOI: 10.1038/s41598-018-31954-w  0.6
2018 Giorello FM, Feijoo M, D'Elía G, Naya DE, Valdez L, Opazo JC, Lessa EP. An association between differential expression and genetic divergence in the Patagonian olive mouse (Abrothrix olivacea). Molecular Ecology. PMID 29940092 DOI: 10.1111/mec.14778  0.56
2018 Opazo JC, Zavala K, Miranda-Rottmann S, Araya R. Evolution of dopamine receptors: phylogenetic evidence suggests a later origin of the DRD and DRD dopamine receptor gene lineages. Peerj. 6: e4593. PMID 29666757 DOI: 10.7717/peerj.4593  0.6
2018 Hoffmann FG, Vandewege MW, Storz JF, Opazo JC. Gene turnover and diversification of the α- and β-globin gene families in sauropsid vertebrates. Genome Biology and Evolution. PMID 29340581 DOI: 10.1093/gbe/evy001  0.8
2017 Malone L, Opazo JC, Ryan PL, Hoffmann FG. Progressive erosion of the Relaxin1 gene in Bovids. General and Comparative Endocrinology. PMID 28733228 DOI: 10.1016/j.ygcen.2017.07.011  0.8
2017 Céspedes HA, Zavala K, Vandewege MW, Opazo JC. Evolution of the α2-adrenoreceptors in vertebrates: ADRA2D is absent in mammals and crocodiles. General and Comparative Endocrinology. PMID 28622977 DOI: 10.1016/j.ygcen.2017.06.006  0.6
2017 Opazo JC, Zavala K, Krall P, Arias RA. Evolution of gremlin 2 in cetartiodactyl mammals: gene loss coincides with lack of upper jaw incisors in ruminants. Peerj. 5: e2901. PMID 28149683 DOI: 10.7717/peerj.2901  0.6
2017 Zavala K, Vandewege MW, Hoffmann FG, Opazo JC. Evolution of the β-adrenoreceptors in vertebrates. General and Comparative Endocrinology. 240: 129-137. PMID 27769631 DOI: 10.1016/j.ygcen.2016.10.005  0.8
2016 Wichmann IA, Zavala K, Hoffmann FG, Vandewege MW, Corvalán AH, Amigo JD, Owen GI, Opazo JC. Evolutionary history of the reprimo tumor suppressor gene family in vertebrates with a description of a new reprimo gene lineage. Gene. PMID 27432065 DOI: 10.1016/j.gene.2016.07.036  0.8
2015 Zavala K, Opazo JC. Lineage-Specific Expansion of the Chalcone Synthase Gene Family in Rosids. Plos One. 10: e0133400. PMID 26181912 DOI: 10.1371/journal.pone.0133400  0.6
2015 Valdez L, Giorello F, Feijoo M, Opazo JC, Lessa EP, Naya DE, D'Elía G. Characterization of the kidney transcriptome of the long-haired mouse Abrothrix hirta (Rodentia, Sigmodontinae) and comparison with that of the olive mouse A. olivacea. Plos One. 10: e0121148. PMID 25860131 DOI: 10.1371/journal.pone.0121148  0.56
2015 Opazo JC, Lee AP, Hoffmann FG, Toloza-Villalobos J, Burmester T, Venkatesh B, Storz JF. Ancient Duplications and Expression Divergence in the Globin Gene Superfamily of Vertebrates: Insights from the Elephant Shark Genome and Transcriptome. Molecular Biology and Evolution. 32: 1684-94. PMID 25743544 DOI: 10.1093/molbev/msv054  0.8
2015 Opazo JC, Hoffmann FG, Natarajan C, Witt CC, Berenbrink M, Storz JF. Gene turnover in the avian globin gene families and evolutionary changes in hemoglobin isoform expression. Molecular Biology and Evolution. 32: 871-87. PMID 25502940 DOI: 10.1093/molbev/msu341  0.8
2015 Toloza-Villalobos J, Arroyo JI, Opazo JC. The circadian clock of teleost fish: a comparative analysis reveals distinct fates for duplicated genes. Journal of Molecular Evolution. 80: 57-64. PMID 25487517 DOI: 10.1007/s00239-014-9660-x  0.76
2014 Green RE, Braun EL, Armstrong J, Earl D, Nguyen N, Hickey G, Vandewege MW, St John JA, Capella-Gutiérrez S, Castoe TA, Kern C, Fujita MK, Opazo JC, Jurka J, Kojima KK, et al. Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs. Science (New York, N.Y.). 346: 1254449. PMID 25504731 DOI: 10.1126/science.1254449  0.8
2014 Zhang G, Li C, Li Q, Li B, Larkin DM, Lee C, Storz JF, Antunes A, Greenwold MJ, Meredith RW, Ödeen A, Cui J, Zhou Q, Xu L, Pan H, ... ... Opazo JC, et al. Comparative genomics reveals insights into avian genome evolution and adaptation. Science (New York, N.Y.). 346: 1311-20. PMID 25504712 DOI: 10.1126/science.1251385  0.8
2014 Nery MF, Arroyo JI, Opazo JC. Increased rate of hair keratin gene loss in the cetacean lineage. Bmc Genomics. 15: 869. PMID 25287022 DOI: 10.1186/1471-2164-15-869  0.8
2014 Giorello FM, Feijoo M, D'Elía G, Valdez L, Opazo JC, Varas V, Naya DE, Lessa EP. Characterization of the kidney transcriptome of the South American olive mouse Abrothrix olivacea. Bmc Genomics. 15: 446. PMID 24909751 DOI: 10.1186/1471-2164-15-446  0.56
2014 Arroyo JI, Hoffmann FG, Opazo JC. Evolution of the relaxin/insulin-like gene family in anthropoid primates. Genome Biology and Evolution. 6: 491-9. PMID 24493383 DOI: 10.1093/gbe/evu023  0.8
2013 Nery MF, Arroyo JI, Opazo JC. Genomic organization and differential signature of positive selection in the alpha and beta globin gene clusters in two cetacean species. Genome Biology and Evolution. 5: 2359-67. PMID 24259315 DOI: 10.1093/gbe/evt176  0.8
2013 Nery MF, Arroyo JI, Opazo JC. Accelerated evolutionary rate of the myoglobin gene in long-diving whales. Journal of Molecular Evolution. 76: 380-7. PMID 23857304 DOI: 10.1007/s00239-013-9572-1  0.8
2013 Nery MF, González DJ, Opazo JC. How to Make a Dolphin: Molecular Signature of Positive Selection in Cetacean Genome. Plos One. 8: e65491. PMID 23840335 DOI: 10.1371/journal.pone.0065491  0.8
2013 Gaitán-Espitia JD, Nespolo RF, Opazo JC. The complete mitochondrial genome of the land snail Cornu aspersum (Helicidae: Mollusca): intra-specific divergence of protein-coding genes and phylogenetic considerations within Euthyneura. Plos One. 8: e67299. PMID 23826260 DOI: 10.1371/journal.pone.0067299  0.8
2013 Opazo JC, Butts GT, Nery MF, Storz JF, Hoffmann FG. Whole-genome duplication and the functional diversification of teleost fish hemoglobins. Molecular Biology and Evolution. 30: 140-53. PMID 22949522 DOI: 10.1093/molbev/mss212  0.8
2013 Storz JF, Opazo JC, Hoffmann FG. Gene duplication, genome duplication, and the functional diversification of vertebrate globins. Molecular Phylogenetics and Evolution. 66: 469-78. PMID 22846683 DOI: 10.1016/j.ympev.2012.07.013  0.8
2012 Arroyo JI, Hoffmann FG, Good S, Opazo JC. INSL4 pseudogenes help define the relaxin family repertoire in the common ancestor of placental mammals. Journal of Molecular Evolution. 75: 73-8. PMID 22961112 DOI: 10.1007/s00239-012-9517-0  0.8
2012 Nery MF, González DJ, Hoffmann FG, Opazo JC. Resolution of the laurasiatherian phylogeny: evidence from genomic data. Molecular Phylogenetics and Evolution. 64: 685-9. PMID 22560954 DOI: 10.1016/j.ympev.2012.04.012  0.8
2012 Arroyo JI, Hoffmann FG, Opazo JC. Gene turnover and differential retention in the relaxin/insulin-like gene family in primates. Molecular Phylogenetics and Evolution. 63: 768-76. PMID 22405815 DOI: 10.1016/j.ympev.2012.02.011  0.8
2012 Arroyo JI, Hoffmann FG, Opazo JC. Gene duplication and positive selection explains unusual physiological roles of the relaxin gene in the European rabbit. Journal of Molecular Evolution. 74: 52-60. PMID 22354201 DOI: 10.1007/s00239-012-9487-2  0.8
2012 Hoffmann FG, Opazo JC, Hoogewijs D, Hankeln T, Ebner B, Vinogradov SN, Bailly X, Storz JF. Evolution of the globin gene family in deuterostomes: lineage-specific patterns of diversification and attrition. Molecular Biology and Evolution. 29: 1735-45. PMID 22319164 DOI: 10.1093/molbev/mss018  0.8
2012 Hoffmann FG, Opazo JC, Storz JF. Whole-genome duplications spurred the functional diversification of the globin gene superfamily in vertebrates. Molecular Biology and Evolution. 29: 303-12. PMID 21965344 DOI: 10.1093/molbev/msr207  0.8
2011 Pierron D, Opazo JC, Heiske M, Papper Z, Uddin M, Chand G, Wildman DE, Romero R, Goodman M, Grossman LI. Silencing, positive selection and parallel evolution: busy history of primate cytochromes C. Plos One. 6: e26269. PMID 22028846 DOI: 10.1371/journal.pone.0026269  0.8
2011 Hoffmann FG, Opazo JC, Storz JF. Differential loss and retention of cytoglobin, myoglobin, and globin-E during the radiation of vertebrates. Genome Biology and Evolution. 3: 588-600. PMID 21697098 DOI: 10.1093/gbe/evr055  0.8
2011 Nespolo RF, Bacigalupe LD, Figueroa CC, Koteja P, Opazo JC. Using new tools to solve an old problem: the evolution of endothermy in vertebrates. Trends in Ecology & Evolution. 26: 414-23. PMID 21571391 DOI: 10.1016/j.tree.2011.04.004  0.8
2011 Storz JF, Opazo JC, Hoffmann FG. Phylogenetic diversification of the globin gene superfamily in chordates. Iubmb Life. 63: 313-22. PMID 21557448 DOI: 10.1002/iub.482  0.8
2011 Storz JF, Hoffmann FG, Opazo JC, Sanger TJ, Moriyama H. Developmental regulation of hemoglobin synthesis in the green anole lizard Anolis carolinensis. The Journal of Experimental Biology. 214: 575-81. PMID 21270305 DOI: 10.1242/jeb.050443  0.8
2011 Hoffmann FG, Opazo JC. Evolution of the relaxin/insulin-like gene family in placental mammals: implications for its early evolution. Journal of Molecular Evolution. 72: 72-9. PMID 21082170 DOI: 10.1007/s00239-010-9403-6  0.8
2010 Hoffmann FG, Opazo JC, Storz JF. Gene cooption and convergent evolution of oxygen transport hemoglobins in jawed and jawless vertebrates. Proceedings of the National Academy of Sciences of the United States of America. 107: 14274-9. PMID 20660759 DOI: 10.1073/pnas.1006756107  0.8
2010 Hoffmann FG, Storz JF, Gorr TA, Opazo JC. Lineage-specific patterns of functional diversification in the alpha- and beta-globin gene families of tetrapod vertebrates. Molecular Biology and Evolution. 27: 1126-38. PMID 20047955 DOI: 10.1093/molbev/msp325  0.8
2009 Wildman DE, Jameson NM, Opazo JC, Yi SV. A fully resolved genus level phylogeny of neotropical primates (Platyrrhini). Molecular Phylogenetics and Evolution. 53: 694-702. PMID 19632342 DOI: 10.1016/j.ympev.2009.07.019  0.8
2009 Opazo JC, Sloan AM, Campbell KL, Storz JF. Origin and ascendancy of a chimeric fusion gene: the beta/delta-globin gene of paenungulate mammals. Molecular Biology and Evolution. 26: 1469-78. PMID 19332641 DOI: 10.1093/molbev/msp064  0.8
2008 Hoffmann FG, Opazo JC, Storz JF. New genes originated via multiple recombinational pathways in the beta-globin gene family of rodents. Molecular Biology and Evolution. 25: 2589-600. PMID 18780876 DOI: 10.1093/molbev/msn200  0.8
2008 Opazo JC, Hoffmann FG, Storz JF. Differential loss of embryonic globin genes during the radiation of placental mammals. Proceedings of the National Academy of Sciences of the United States of America. 105: 12950-5. PMID 18755893 DOI: 10.1073/pnas.0804392105  0.8
2008 Chen C, Opazo JC, Erez O, Uddin M, Santolaya-Forgas J, Goodman M, Grossman LI, Romero R, Wildman DE. The human progesterone receptor shows evidence of adaptive evolution associated with its ability to act as a transcription factor. Molecular Phylogenetics and Evolution. 47: 637-49. PMID 18375150 DOI: 10.1016/j.ympev.2007.12.026  0.8
2008 Uddin M, Goodman M, Erez O, Romero R, Liu G, Islam M, Opazo JC, Sherwood CC, Grossman LI, Wildman DE. Distinct genomic signatures of adaptation in pre- and postnatal environments during human evolution. Proceedings of the National Academy of Sciences of the United States of America. 105: 3215-20. PMID 18305157 DOI: 10.1073/pnas.0712400105  0.8
2008 Storz JF, Hoffmann FG, Opazo JC, Moriyama H. Adaptive functional divergence among triplicated alpha-globin genes in rodents. Genetics. 178: 1623-38. PMID 18245844 DOI: 10.1534/genetics.107.080903  0.8
2008 Opazo JC, Hoffmann FG, Storz JF. Genomic evidence for independent origins of beta-like globin genes in monotremes and therian mammals. Proceedings of the National Academy of Sciences of the United States of America. 105: 1590-5. PMID 18216242 DOI: 10.1073/pnas.0710531105  0.8
2008 Uddin M, Opazo JC, Wildman DE, Sherwood CC, Hof PR, Goodman M, Grossman LI. Molecular evolution of the cytochrome c oxidase subunit 5A gene in primates. Bmc Evolutionary Biology. 8: 8. PMID 18197981 DOI: 10.1186/1471-2148-8-8  0.8
2008 Hoffmann FG, Opazo JC, Storz JF. Rapid rates of lineage-specific gene duplication and deletion in the alpha-globin gene family. Molecular Biology and Evolution. 25: 591-602. PMID 18178968 DOI: 10.1093/molbev/msn004  0.8
2007 Wildman DE, Uddin M, Opazo JC, Liu G, Lefort V, Guindon S, Gascuel O, Grossman LI, Romero R, Goodman M. Genomics, biogeography, and the diversification of placental mammals. Proceedings of the National Academy of Sciences of the United States of America. 104: 14395-400. PMID 17728403 DOI: 10.1073/pnas.0704342104  0.8
2007 Storz JF, Baze M, Waite JL, Hoffmann FG, Opazo JC, Hayes JP. Complex signatures of selection and gene conversion in the duplicated globin genes of house mice. Genetics. 177: 481-500. PMID 17660536 DOI: 10.1534/genetics.107.078550  0.8
2006 Opazo JC, Wildman DE, Prychitko T, Johnson RM, Goodman M. Phylogenetic relationships and divergence times among New World monkeys (Platyrrhini, Primates). Molecular Phylogenetics and Evolution. 40: 274-80. PMID 16698289 DOI: 10.1016/j.ympev.2005.11.015  0.8
2005 Schmidt TR, Wildman DE, Uddin M, Opazo JC, Goodman M, Grossman LI. Rapid electrostatic evolution at the binding site for cytochrome c on cytochrome c oxidase in anthropoid primates. Proceedings of the National Academy of Sciences of the United States of America. 102: 6379-84. PMID 15851671 DOI: 10.1073/pnas.0409714102  0.8
2005 Opazo JC, Palma RE, Melo F, Lessa EP. Adaptive evolution of the insulin gene in caviomorph rodents. Molecular Biology and Evolution. 22: 1290-8. PMID 15728738 DOI: 10.1093/molbev/msi117  0.56
2004 Bacigalupe LD, Nespolo RF, Opazo JC, Bozinovic F. Phenotypic flexibility in a novel thermal environment: phylogenetic inertia in thermogenic capacity and evolutionary adaptation in organ size. Physiological and Biochemical Zoology : Pbz. 77: 805-15. PMID 15547798 DOI: 10.1086/422229  0.8
2004 Opazo JC, Soto-Gamboa M, Bozinovic F. Blood glucose concentration in caviomorph rodents. Comparative Biochemistry and Physiology. Part a, Molecular & Integrative Physiology. 137: 57-64. PMID 14720591  0.32
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