Sandeep Venkataram - Related publications

University of California, San Diego, La Jolla, CA 
evolution, yeast
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Bertram J. Allele frequency divergence reveals ubiquitous influence of positive selection in Drosophila. Plos Genetics. 17: e1009833. PMID 34591854 DOI: 10.1371/journal.pgen.1009833   
2021 Stephan W. Rapid Evolutionary Adaptation in Response to Selection on Quantitative Traits. Life (Basel, Switzerland). 11. PMID 34440541 DOI: 10.3390/life11080797   
2021 Phillips KN, Cooper TF. The cost of evolved constitutive gene expression is usually, but not always, maintained during evolution of generalist populations. Ecology and Evolution. 11: 12497-12507. PMID 34594515 DOI: 10.1002/ece3.7994   
2021 Kozakiewicz CP, Funk WC. Bat signal (of selection) summons evolutionary hope in face of epidemic disease: an example of the power and promise of genetic monitoring. Molecular Ecology. PMID 34534380 DOI: 10.1111/mec.16181   
2021 Campbell MA, Anderson EC, Garza JC, Pearse DE. Polygenic basis and the role of genome duplication in adaptation to similar selective environments. The Journal of Heredity. PMID 34420047 DOI: 10.1093/jhered/esab049   
2021 Aggeli D, Li Y, Sherlock G. Changes in the distribution of fitness effects and adaptive mutational spectra following a single first step towards adaptation. Nature Communications. 12: 5193. PMID 34465770 DOI: 10.1038/s41467-021-25440-7   
2021 Amicone M, Gordo I. Molecular signatures of resource competition: Clonal interference favors ecological diversification and can lead to incipient speciation. Evolution; International Journal of Organic Evolution. PMID 34341983 DOI: 10.1111/evo.14315   
2021 Marrot P, Latutrie M, Piquet J, Pujol B. Natural selection fluctuates at an extremely fine spatial scale inside a wild population of snapdragon plants. Evolution; International Journal of Organic Evolution. PMID 34535895 DOI: 10.1111/evo.14359   
2021 Madgwick PG, Kanitz R. Evolution of resistance under alternative models of selective interference. Journal of Evolutionary Biology. PMID 34449949 DOI: 10.1111/jeb.13919   
2021 Zhang J, Debets AJM, Verweij PE, Snelders E. Azole-Resistance Development; How the Lifecycle Defines the Potential for Adaptation. Journal of Fungi (Basel, Switzerland). 7. PMID 34436138 DOI: 10.3390/jof7080599   
2021 D'Aguillo M, Hazelwood C, Quarles B, Donohue K. Genetic Consequences of Biologically Altered Environments. The Journal of Heredity. PMID 34534330 DOI: 10.1093/jhered/esab047   
2021 Gompert Z, Springer A, Brady M, Chaturvedi S, Lucas LK. Genomic time-series data show that gene flow maintains high genetic diversity despite substantial genetic drift in a butterfly species. Molecular Ecology. PMID 34379852 DOI: 10.1111/mec.16111   
2021 Harris KB, Flynn KM, Cooper VS. Polygenic adaptation and clonal interference enable sustained diversity in experimental Pseudomonas aeruginosa populations. Molecular Biology and Evolution. PMID 34410431 DOI: 10.1093/molbev/msab248   
2021 Zhang T, Chen J, Zhang J, Guo YT, Zhou X, Li MW, Zheng ZZ, Zhang TZ, Murphy RW, Nevo E, Shi P. Phenotypic and genomic adaptations to the extremely high elevation in plateau zokor (Myospalax baileyi). Molecular Ecology. PMID 34510615 DOI: 10.1111/mec.16174   
2021 Horvath R, Josephs EB, Pesquet E, Stinchcombe JR, Wright SI, Scofield D, Slotte T. Selection on accessible chromatin regions in Capsella grandiflora. Molecular Biology and Evolution. PMID 34498072 DOI: 10.1093/molbev/msab270   
2021 Flynn RW, Welch AM, Lance SL. Divergence in heritable life history traits suggests potential for local adaptation and trade-offs associated with a coal ash disposal site. Evolutionary Applications. 14: 2039-2054. PMID 34429747 DOI: 10.1111/eva.13256   
2021 Espinosa-Soto C, Hernández U, Posadas-García YS. Recombination facilitates genetic assimilation of new traits in gene regulatory networks. Evolution & Development. e12391. PMID 34455697 DOI: 10.1111/ede.12391   
2021 Schiffman JS, Ralph PL. System drift and speciation. Evolution; International Journal of Organic Evolution. PMID 34529267 DOI: 10.1111/evo.14356   
2021 Jensen EL, Gaughran SJ, Garrick RC, Russello MA, Caccone A. Demographic history and patterns of molecular evolution from whole genome sequencing in the radiation of Galapagos giant tortoises. Molecular Ecology. PMID 34510620 DOI: 10.1111/mec.16176   
2021 Targa A, Larrimore KE, Wong CK, Chong YL, Fung R, Lee J, Choi H, Rancati G. Non-genetic and genetic rewiring underlie adaptation to hypomorphic alleles of an essential gene. The Embo Journal. e107839. PMID 34528284 DOI: 10.15252/embj.2021107839   
2021 Glaser-Schmitt A, Wittmann MJ, Ramnarine TJS, Parsch J. Sexual antagonism, temporally fluctuating selection, and variable dominance affect a regulatory polymorphism in Drosophila melanogaster. Molecular Biology and Evolution. PMID 34289067 DOI: 10.1093/molbev/msab215   
2021 Jackson B, Charlesworth B. Evidence for a force favoring GC over AT at short intronic sites in Drosophila simulans and Drosophila melanogaster. G3 (Bethesda, Md.). 11. PMID 34544137 DOI: 10.1093/g3journal/jkab240   
2021 Karunarathna NL, Patiranage DSR, Harloff HJ, Sashidhar N, Jung C. Genomic background selection to reduce the mutation load after random mutagenesis. Scientific Reports. 11: 19404. PMID 34593904 DOI: 10.1038/s41598-021-98934-5   
2021 Adeyemo AA, Shriner D, Bentley AR, Gbadegesin RA, Rotimi CN. Evolutionary genetics and acclimatization in nephrology. Nature Reviews. Nephrology. PMID 34584272 DOI: 10.1038/s41581-021-00483-7   
2021 Farooq T, Umar M, She X, Tang Y, He Z. Molecular phylogenetics and evolutionary analysis of a highly recombinant begomovirus, Cotton leaf curl Multan virus, and associated satellites. Virus Evolution. 7: veab054. PMID 34532058 DOI: 10.1093/ve/veab054   
2021 Gordon TR, Henry PM, Jenner BN, Scott JC. Spontaneous changes in somatic compatibility in Fusarium circinatum. Fungal Biology. 125: 725-732. PMID 34420699 DOI: 10.1016/j.funbio.2021.04.008   
2021 Agrawal AA, Hastings AP, Maron JL. Evolution and seed dormancy shape plant genotypic structure through a successional cycle. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34400497 DOI: 10.1073/pnas.2026212118   
2021 Santos-Lopez A, Marshall CW, Haas AL, Turner CB, Rasero J, Cooper VS. The roles of history, chance, and natural selection in the evolution of antibiotic resistance. Elife. 10. PMID 34431477 DOI: 10.7554/eLife.70676   
2021 Choi JY, Dai X, Alam O, Peng JZ, Rughani P, Hickey S, Harrington E, Juul S, Ayroles JF, Purugganan MD, Stacy EA. Ancestral polymorphisms shape the adaptive radiation of across the Hawaiian Islands. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34497122 DOI: 10.1073/pnas.2023801118   
2021 Konečná V, Bray S, Vlček J, Bohutínská M, Požárová D, Choudhury RR, Bollmann-Giolai A, Flis P, Salt DE, Parisod C, Yant L, Kolář F. Parallel adaptation in autopolyploid Arabidopsis arenosa is dominated by repeated recruitment of shared alleles. Nature Communications. 12: 4979. PMID 34404804 DOI: 10.1038/s41467-021-25256-5   
2021 Brass DP, Cobbold CA, Ewing DA, Purse BV, Callaghan A, White SM. Phenotypic plasticity as a cause and consequence of population dynamics. Ecology Letters. PMID 34412157 DOI: 10.1111/ele.13862   
2021 Ochoa A, Gibbs HL. Genomic signatures of inbreeding and mutation load in a threatened rattlesnake. Molecular Ecology. PMID 34448259 DOI: 10.1111/mec.16147   
2021 Le Vaillant J, Potti J, Camacho C, Canal D, Martínez-Padilla J. Fluctuating selection driven by global and local climatic conditions leads to stasis in breeding time in a migratory bird. Journal of Evolutionary Biology. PMID 34415649 DOI: 10.1111/jeb.13916   
2021 Scott BA, Haile-Mariam M, Cocks BG, Pryce JE. How genomic selection has increased rates of genetic gain and inbreeding in the Australian national herd, genomic information nucleus, and bulls. Journal of Dairy Science. PMID 34454757 DOI: 10.3168/jds.2021-20326   
2021 Sagar V, Kaelin CB, Natesh M, Reddy PA, Mohapatra RK, Chhattani H, Thatte P, Vaidyanathan S, Biswas S, Bhatt S, Paul S, Jhala YV, Verma MM, Pandav B, Mondol S, et al. High frequency of an otherwise rare phenotype in a small and isolated tiger population. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34518374 DOI: 10.1073/pnas.2025273118   
2021 Cropp R, Norbury J. The eco-evolutionary modelling of populations and their traits using a measure of trait differentiation. Journal of Theoretical Biology. 531: 110893. PMID 34481861 DOI: 10.1016/j.jtbi.2021.110893   
2021 Valencia-Montoya WA, Flaven E, Pouzadoux J, Imbert E, Cheptou PO. Rapid divergent evolution of an annual plant across a latitudinal gradient revealed by seed resurrection. Evolution; International Journal of Organic Evolution. PMID 34558662 DOI: 10.1111/evo.14364   
2021 Su Y, Huang Q, Wang Z, Wang T. High genetic and epigenetic variation of transposable elements: Potential drivers to rapid adaptive evolution for the noxious invasive weed . Ecology and Evolution. 11: 13501-13517. PMID 34646486 DOI: 10.1002/ece3.8075   
2021 Griffiths JS, Johnson KM, Kelly MW. Evolutionary Change in the Eastern Oyster, Crassostrea Virginica, Following Low Salinity Exposure. Integrative and Comparative Biology. PMID 34448845 DOI: 10.1093/icb/icab185   
2021 AlZaben F, Chuong JN, Abrams MB, Brem RB. Joint effects of genes underlying a temperature specialization tradeoff in yeast. Plos Genetics. 17: e1009793. PMID 34520469 DOI: 10.1371/journal.pgen.1009793   
2021 Shirsekar G, Devos J, Latorre SM, Blaha A, Queiroz Dias M, González Hernando A, Lundberg DS, Burbano HA, Fenster CB, Weigel D. Multiple Sources of Introduction of North American Arabidopsis thaliana From Across Eurasia. Molecular Biology and Evolution. PMID 34499163 DOI: 10.1093/molbev/msab268   
2021 Tregenza T, Rodríguez-Muñoz R, Boonekamp JJ, Hopwood PE, Sørensen JG, Bechsgaard J, Settepani V, Hegde V, Waldie C, May E, Peters C, Pennington Z, Leone P, Munk EM, Greenrod STE, et al. Evidence for genetic isolation and local adaptation in the field cricket Gryllus campestris. Journal of Evolutionary Biology. PMID 34378263 DOI: 10.1111/jeb.13911   
2021 Priklopil T, Lehmann L. Metacommunities, fitness and gradual evolution. Theoretical Population Biology. PMID 34530032 DOI: 10.1016/j.tpb.2021.09.002   
2021 DeVore JL, Crossland MR, Shine R, Ducatez S. The evolution of targeted cannibalism and cannibal-induced defenses in invasive populations of cane toads. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34426494 DOI: 10.1073/pnas.2100765118   
2021 Renton J, Page KM. Cooperative success in epithelial public goods games. Journal of Theoretical Biology. 528: 110838. PMID 34303702 DOI: 10.1016/j.jtbi.2021.110838   
2021 Lessard S, Li C, Zheng XD, Tao Y. Inclusive fitness and Hamilton's rule in a stochastic environment. Theoretical Population Biology. PMID 34627803 DOI: 10.1016/j.tpb.2021.09.007   
2021 Baltzegar J, Vella M, Gunning C, Vasquez G, Astete H, Stell F, Fisher M, Scott TW, Lenhart A, Lloyd AL, Morrison A, Gould F. Rapid evolution of knockdown resistance haplotypes in response to pyrethroid selection in . Evolutionary Applications. 14: 2098-2113. PMID 34429751 DOI: 10.1111/eva.13269   
2021 Tanaka H, Kreisberg JF, Ideker T. Genetic dissection of complex traits using hierarchical biological knowledge. Plos Computational Biology. 17: e1009373. PMID 34534210 DOI: 10.1371/journal.pcbi.1009373   
2021 Brandt A, Tran Van P, Bluhm C, Anselmetti Y, Dumas Z, Figuet E, François CM, Galtier N, Heimburger B, Jaron KS, Labédan M, Maraun M, Parker DJ, Robinson-Rechavi M, Schaefer I, et al. Haplotype divergence supports long-term asexuality in the oribatid mite . Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34535550 DOI: 10.1073/pnas.2101485118   
2021 Wright SJ, Goad DM, Gross BL, Muñoz PR, Olsen KM. Genetic trade-offs underlie divergent life history strategies for local adaptation in white clover. Molecular Ecology. PMID 34532899 DOI: 10.1111/mec.16180