Pasi Rastas - Publications

Affiliations: 
Zoology University of Cambridge, Cambridge, England, United Kingdom 

7/42 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Darragh K, Orteu A, Black D, Byers KJRP, Szczerbowski D, Warren IA, Rastas P, Pinharanda A, Davey JW, Fernanda Garza S, Abondano Almeida D, Merrill RM, McMillan WO, Schulz S, Jiggins CD. A novel terpene synthase controls differences in anti-aphrodisiac pheromone production between closely related Heliconius butterflies. Plos Biology. 19: e3001022. PMID 33465061 DOI: 10.1371/journal.pbio.3001022  0.76
2021 Byers KJRP, Darragh K, Fernanda Garza S, Abondano Almeida D, Warren IA, Rastas PMA, Merrill RM, Schulz S, McMillan WO, Jiggins CD. Clustering of loci controlling species differences in male chemical bouquets of sympatric butterflies. Ecology and Evolution. 11: 89-107. PMID 33437416 DOI: 10.1002/ece3.6947  0.76
2020 Byers KJRP, Darragh K, Musgrove J, Almeida DA, Garza SF, Warren IA, Rastas PM, Kučka M, Chan YF, Merrill RM, Schulz S, McMillan WO, Jiggins CD. A major locus controls a biologically active pheromone component in Heliconius melpomene. Evolution; International Journal of Organic Evolution. PMID 31913497 DOI: 10.1111/Evo.13922  0.76
2019 Merrill RM, Rastas P, Martin SH, Melo MC, Barker S, Davey J, McMillan WO, Jiggins CD. Genetic dissection of assortative mating behavior. Plos Biology. 17: e2005902. PMID 30730873 DOI: 10.1371/Journal.Pbio.2005902  0.76
2018 Van Belleghem SM, Vangestel C, De Wolf K, De Corte Z, Möst M, Rastas P, De Meester L, Hendrickx F. Evolution at two time frames: Polymorphisms from an ancient singular divergence event fuel contemporary parallel evolution. Plos Genetics. 14: e1007796. PMID 30422983 DOI: 10.1371/Journal.Pgen.1007796  0.32
2017 Davey JW, Barker SL, Rastas PM, Pinharanda A, Martin SH, Durbin R, McMillan WO, Merrill RM, Jiggins CD. No evidence for maintenance of a sympatric species barrier by chromosomal inversions. Evolution Letters. 1: 138-154. PMID 30283645 DOI: 10.1002/evl3.12  0.76
2017 Van Belleghem SM, Rastas P, Papanicolaou A, Martin SH, Arias CF, Supple MA, Hanly JJ, Mallet J, Lewis JJ, Hines HM, Ruiz M, Salazar C, Linares M, Moreira GRP, Jiggins CD, et al. Complex modular architecture around a simple toolkit of wing pattern genes. Nature Ecology & Evolution. 1. PMID 28523290 DOI: 10.1038/S41559-016-0052  0.76
Low-probability matches
2019 Morris J, Navarro N, Rastas P, Rawlins LD, Sammy J, Mallet J, Dasmahapatra KK. The genetic architecture of adaptation: convergence and pleiotropy in Heliconius wing pattern evolution. Heredity. PMID 30670842 DOI: 10.1038/S41437-018-0180-0  0.04
2021 Kivikoski M, Rastas P, Löytynoja A, Merilä J. Automated improvement of stickleback reference genome assemblies with Lep-Anchor software. Molecular Ecology Resources. PMID 33955177 DOI: 10.1111/1755-0998.13404  0.01
2021 Celorio-Mancera MP, Rastas P, Steward RA, Nylin S, Wheat CW. Chromosome level assembly of the comma butterfly (Polygonia c-album). Genome Biology and Evolution. PMID 33749729 DOI: 10.1093/gbe/evab054  0.01
2021 Boyle JH, Rastas PMA, Huang X, Garner AG, Vythilingam I, Armbruster PA. A Linkage-Based Genome Assembly for the Mosquito and Identification of Chromosomal Regions Affecting Diapause. Insects. 12. PMID 33669192 DOI: 10.3390/insects12020167  0.01
2021 Kemppainen P, Li Z, Rastas P, Löytynoja A, Fang B, Yang J, Guo B, Shikano T, Merilä J. Genetic population structure constrains local adaptation in sticklebacks. Molecular Ecology. PMID 33464655 DOI: 10.1111/mec.15808  0.01
2020 Bainbridge HE, Brien MN, Morochz C, Salazar PA, Rastas P, Nadeau NJ. Limited genetic parallels underlie convergent evolution of quantitative pattern variation in mimetic butterflies. Journal of Evolutionary Biology. PMID 32939870 DOI: 10.1111/Jeb.13704  0.01
2020 Alonso-Serra J, Shi X, Peaucelle A, Rastas P, Bourdon M, Immanen J, Takahashi J, Koivula H, Eswaran G, Muranen S, Help H, Smolander OP, Su C, Safronov O, Gerber L, et al. ELIMÄKI Locus Is Required for Vertical Proprioceptive Response in Birch Trees. Current Biology : Cb. PMID 32004453 DOI: 10.1016/J.Cub.2019.12.016  0.01
2020 Rastas P. Lep-Anchor: Automated construction of linkage map anchored haploid genomes. Bioinformatics (Oxford, England). PMID 31913460 DOI: 10.1093/Bioinformatics/Btz978  0.01
2019 Veltsos P, Ridout KE, Toups MA, González-Martínez SC, Muyle A, Emery O, Rastas P, Hudzieczek V, Hobza R, Vyskot B, Marais GAB, Filatov DA, Pannell JR. Early Sex-Chromosome Evolution in the Diploid Dioecious Plant Mercurialis annua. Genetics. 212: 815-835. PMID 33954407 DOI: 10.1534/genetics.119.302045  0.01
2019 Veltsos P, Ridout KE, Toups MA, González-Martínez SC, Muyle A, Emery O, Rastas P, Hudzieczek V, Hobza R, Vyskot B, Marais GAB, Filatov DA, Pannell JR. Early Sex-Chromosome Evolution in the Diploid Dioecious Plant Mercurialis annua. Genetics. 212: 815-835. PMID 33954385 DOI: 10.1534/genetics.119.302045  0.01
2019 Varadharajan S, Rastas P, Löytynoja A, Matschiner M, Calboli FCF, Guo B, Nederbragt AJ, Jakobsen KS, Merilä J. A high-quality assembly of the nine-spined stickleback (Pungitius pungitius) genome. Genome Biology and Evolution. PMID 31687752 DOI: 10.1093/Gbe/Evz240  0.01
2019 Hill J, Rastas P, Hornett EA, Neethiraj R, Clark N, Morehouse N, de la Paz Celorio-Mancera M, Cols JC, Dircksen H, Meslin C, Keehnen N, Pruisscher P, Sikkink K, Vives M, Vogel H, et al. Unprecedented reorganization of holocentric chromosomes provides insights into the enigma of lepidopteran chromosome evolution. Science Advances. 5: eaau3648. PMID 31206013 DOI: 10.1126/Sciadv.Aau3648  0.01
2019 Salojärvi J, Smolander OP, Nieminen K, Rajaraman S, Safronov O, Safdari P, Lamminmäki A, Immanen J, Lan T, Tanskanen J, Rastas P, Amiryousefi A, Jayaprakash B, Kammonen JI, Hagqvist R, et al. Author Correction: Genome sequencing and population genomic analyses provide insights into the adaptive landscape of silver birch. Nature Genetics. PMID 31197270 DOI: 10.1038/S41588-019-0442-7  0.01
2019 Veltsos P, Ridout KE, Toups MA, González-Martínez SC, Muyle A, Emery O, Rastas P, Hudzieczek V, Hobza R, Vyskot B, Marais GAB, Filatov DA, Pannell JR. Early Sex-chromosome Evolution in the Diploid Dioecious Plant . Genetics. PMID 31113811 DOI: 10.1534/Genetics.119.302045  0.01
2019 Walve R, Rastas P, Salmela L. Kermit: linkage map guided long read assembly. Algorithms For Molecular Biology : Amb. 14: 8. PMID 30930956 DOI: 10.1186/S13015-019-0143-X  0.01
2018 Savriama Y, Valtonen M, Kammonen JI, Rastas P, Smolander OP, Lyyski A, Häkkinen TJ, Corfe IJ, Gerber S, Salazar-Ciudad I, Paulin L, Holm L, Löytynoja A, Auvinen P, Jernvall J. Bracketing phenogenotypic limits of mammalian hybridization. Royal Society Open Science. 5: 180903. PMID 30564397 DOI: 10.1098/Rsos.180903  0.01
2018 Littrell J, Tsaih SW, Baud A, Rastas P, Solberg-Woods L, Flister MJ. A High-Resolution Genetic Map for the Laboratory Rat. G3 (Bethesda, Md.). PMID 29760201 DOI: 10.1534/G3.118.200187  0.01
2018 Nguyen NH, Rastas PMA, Premachandra HKA, Knibb W. First High-Density Linkage Map and Single Nucleotide Polymorphisms Significantly Associated With Traits of Economic Importance in Yellowtail Kingfish . Frontiers in Genetics. 9: 127. PMID 29719550 DOI: 10.3389/fgene.2018.00127  0.01
2018 Li Z, Kemppainen P, Rastas P, Merilä J. Linkage disequilibrium clustering-based approach for association mapping with tightly linked genome-wide data. Molecular Ecology Resources. PMID 29673105 DOI: 10.1111/1755-0998.12893  0.01
2018 Gutierrez AP, Bean TP, Hooper C, Stenton CA, Sanders MB, Paley RK, Rastas P, Bryrom M, Matika O, Houston RD. A Genome-Wide Association Study for Host Resistance to Ostreid Herpesvirus in Pacific Oysters (). G3 (Bethesda, Md.). PMID 29472307 DOI: 10.1534/G3.118.200113  0.01
2017 Rastas P. Lep-MAP3: robust linkage mapping even for low-coverage whole genome sequencing data. Bioinformatics (Oxford, England). 33: 3726-3732. PMID 29036272 DOI: 10.1093/Bioinformatics/Btx494  0.01
2017 Salojärvi J, Smolander OP, Nieminen K, Rajaraman S, Safronov O, Safdari P, Lamminmäki A, Immanen J, Lan T, Tanskanen J, Rastas P, Amiryousefi A, Jayaprakash B, Kammonen JI, Hagqvist R, et al. Genome sequencing and population genomic analyses provide insights into the adaptive landscape of silver birch. Nature Genetics. PMID 28481341 DOI: 10.1038/Ng.3862  0.01
2017 Fountain T, Husby A, Nonaka E, DiLeo MF, Korhonen JH, Rastas P, Schulz T, Saastamoinen M, Hanski I. Inferring dispersal across a fragmented landscape using reconstructed families in the Glanville fritillary butterfly Evolutionary Applications. 11: 287-297. DOI: 10.1111/Eva.12552  0.01
2015 Rastas P, Calboli FC, Guo B, Shikano T, Merilä J. Construction of ultra-dense linkage maps with Lep-MAP2: stickleback F2 recombinant crosses as an example. Genome Biology and Evolution. PMID 26668116 DOI: 10.1093/Gbe/Evv250  0.01
2015 Kvist J, Mattila AL, Somervuo P, Ahola V, Koskinen P, Paulin L, Salmela L, Fountain T, Rastas P, Ruokolainen A, Taipale M, Holm L, Auvinen P, Lehtonen R, Frilander MJ, et al. Flight-induced changes in gene expression in the Glanville fritillary butterfly. Molecular Ecology. 24: 4886-900. PMID 26331775 DOI: 10.1111/Mec.13359  0.01
2015 Shao C, Niu Y, Rastas P, Liu Y, Xie Z, Li H, Wang L, Jiang Y, Tai S, Tian Y, Sakamoto T, Chen S. Genome-wide SNP identification for the construction of a high-resolution genetic map of Japanese flounder (Paralichthys olivaceus): applications to QTL mapping of Vibrio anguillarum disease resistance and comparative genomic analysis. Dna Research : An International Journal For Rapid Publication of Reports On Genes and Genomes. 22: 161-70. PMID 25762582 DOI: 10.1093/Dnares/Dsv001  0.01
2015 Kvist J, Mattila ALK, Somervuo P, Ahola V, Koskinen P, Paulin L, Salmela L, Fountain T, Rastas P, Ruokolainen A, Taipale M, Holm L, Auvinen P, Lehtonen R, Frilander MJ, et al. Flight-induced changes in gene expression in the Glanville fritillary butterfly Molecular Ecology. 24: 4886-4900. DOI: 10.1111/mec.13359  0.01
2014 Ahola V, Lehtonen R, Somervuo P, Salmela L, Koskinen P, Rastas P, Välimäki N, Paulin L, Kvist J, Wahlberg N, Tanskanen J, Hornett EA, Ferguson LC, Luo S, Cao Z, et al. The Glanville fritillary genome retains an ancient karyotype and reveals selective chromosomal fusions in Lepidoptera. Nature Communications. 5: 4737. PMID 25189940 DOI: 10.1038/Ncomms5737  0.01
2013 Rastas P, Paulin L, Hanski I, Lehtonen R, Auvinen P. Lep-MAP: fast and accurate linkage map construction for large SNP datasets. Bioinformatics (Oxford, England). 29: 3128-34. PMID 24078685 DOI: 10.1093/Bioinformatics/Btt563  0.01
2013 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, et al. DNA-binding specificities of human transcription factors. Cell. 152: 327-39. PMID 23332764 DOI: 10.1016/J.Cell.2012.12.009  0.01
2012 Mattila AL, Duplouy A, Kirjokangas M, Lehtonen R, Rastas P, Hanski I. High genetic load in an old isolated butterfly population. Proceedings of the National Academy of Sciences of the United States of America. 109: E2496-505. PMID 22908265 DOI: 10.1073/Pnas.1205789109  0.01
2012 Karinen S, Saarinen S, Lehtonen R, Rastas P, Vahteristo P, Aaltonen LA, Hautaniemi S. Rule-based induction method for haplotype comparison and identification of candidate disease loci. Genome Medicine. 4: 21. PMID 22429919 DOI: 10.1186/Gm320  0.01
2011 Pizzi C, Rastas P, Ukkonen E. Finding significant matches of position weight matrices in linear time. Ieee/Acm Transactions On Computational Biology and Bioinformatics. 8: 69-79. PMID 21071798 DOI: 10.1109/Tcbb.2009.35  0.01
2009 Korhonen J, Martinmäki P, Pizzi C, Rastas P, Ukkonen E. MOODS: fast search for position weight matrix matches in DNA sequences. Bioinformatics (Oxford, England). 25: 3181-2. PMID 19773334 DOI: 10.1093/Bioinformatics/Btp554  0.01
2001 HANSKI E. The Palaeoproterozoic Komatiite-Picrite Association of Finnish Lapland Journal of Petrology. 42: 855-876. DOI: 10.1093/PETROLOGY/42.5.855  0.01
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