Ning Jiang - Publications

Affiliations: 
Horticulture Michigan State University, East Lansing, MI 

90 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Planta J, Liang YY, Xin H, Chansler MT, Prather LA, Jiang N, Jiang J, Childs KL. Chromosome scale genome assemblies and annotations for Poales species Carex cristatella, Carex scoparia, Juncus effusus and Juncus inflexus. G3 (Bethesda, Md.). PMID 35976112 DOI: 10.1093/g3journal/jkac211  0.502
2022 Cerbin S, Ou S, Li Y, Sun Y, Jiang N. Distinct Composition and Amplification Dynamics of Transposable Elements in Sacred Lotus (Nelumbo nucifera Gaertn.). The Plant Journal : For Cell and Molecular Biology. PMID 35959634 DOI: 10.1111/tpj.15938  0.818
2022 Zhang Y, Chen C, Wu J, Jin J, Xu T, Zhou Y, Cui P, Chen J, Chen S, Jiang N, Zhang W. Sequence-Based Genomic Analysis Reveals Transmission of Antibiotic Resistance and Virulence among Carbapenemase-Producing Klebsiella pneumoniae Strains. Msphere. e0014322. PMID 35546482 DOI: 10.1128/msphere.00143-22  0.317
2022 Ou S, Su W, Liao Y, Chougule K, Agda JRA, Hellinga AJ, Lugo CSB, Elliott TA, Ware D, Peterson T, Jiang N, Hirsch CN, Hufford MB. Author Correction: Benchmarking transposable element annotation methods for creation of a streamlined, comprehensive pipeline. Genome Biology. 23: 76. PMID 35260190 DOI: 10.1186/s13059-022-02645-7  0.778
2021 Li Y, Jiang N, Sun Y. AnnoSINE: A short interspersed nuclear elements annotation tool for plant genomes. Plant Physiology. PMID 34792587 DOI: 10.1093/plphys/kiab524  0.498
2021 Lu CH, Li JY, Mi MG, Lin ZL, Jiang N, Gai X, Ma JH, Lei LP, Xia ZY. Complete genome sequence of subsp. strain LLRS-1, isolated from wilted tobacco in China. Phytopathology. PMID 34100304 DOI: 10.1094/PHYTO-04-21-0138-A  0.326
2021 Qin P, Lu H, Du H, Wang H, Chen W, Chen Z, He Q, Ou S, Zhang H, Li X, Li X, Li Y, Liao Y, Gao Q, Tu B, ... ... Jiang N, et al. Pan-genome analysis of 33 genetically diverse rice accessions reveals hidden genomic variations. Cell. PMID 34051138 DOI: 10.1016/j.cell.2021.04.046  0.776
2020 Xu J, Wu J, Teng X, Cai L, Yuan H, Chen X, Hu M, Wang X, Jiang N, Chen H. Large duplication in LMBR1 gene in a large Chinese pedigree with triphalangeal thumb polysyndactyly syndrome. American Journal of Medical Genetics. Part A. PMID 32662247 DOI: 10.1002/ajmg.a.61757  0.383
2019 Ou S, Jiang N. LTR_FINDER_parallel: parallelization of LTR_FINDER enabling rapid identification of long terminal repeat retrotransposons. Mobile Dna. 10: 48. PMID 31857828 DOI: 10.1186/S13100-019-0193-0  0.78
2019 Ou S, Su W, Liao Y, Chougule K, Agda JRA, Hellinga AJ, Lugo CSB, Elliott TA, Ware D, Peterson T, Jiang N, Hirsch CN, Hufford MB. Benchmarking transposable element annotation methods for creation of a streamlined, comprehensive pipeline. Genome Biology. 20: 275. PMID 31843001 DOI: 10.1186/S13059-019-1905-Y  0.83
2019 Cerbin S, Wai CM, VanBuren R, Jiang N. GingerRoot: a novel DNA transposon encoding integrase-related transposase in plants and animals. Genome Biology and Evolution. PMID 31633753 DOI: 10.1093/Gbe/Evz230  0.839
2019 Edger PP, Poorten TJ, VanBuren R, Hardigan MA, Colle M, McKain MR, Smith RD, Teresi SJ, Nelson ADL, Wai CM, Alger EI, Bird KA, Yocca AE, Pumplin N, Ou S, ... ... Jiang N, et al. Author Correction: Origin and evolution of the octoploid strawberry genome. Nature Genetics. PMID 30842601 DOI: 10.1038/S41588-019-0380-4  0.705
2019 Edger PP, Poorten TJ, VanBuren R, Hardigan MA, Colle M, McKain MR, Smith RD, Teresi SJ, Nelson ADL, Wai CM, Alger EI, Bird KA, Yocca AE, Pumplin N, Ou S, ... ... Jiang N, et al. Origin and evolution of the octoploid strawberry genome. Nature Genetics. PMID 30804557 DOI: 10.1038/S41588-019-0356-4  0.76
2019 Colle M, Leisner CP, Wai CM, Ou S, Bird KA, Wang J, Wisecaver JH, Yocca AE, Alger EI, Tang H, Xiong Z, Callow P, Ben-Zvi G, Brodt A, Baruch K, ... ... Jiang N, et al. Haplotype-phased genome and evolution of phytonutrient pathways of tetraploid blueberry. Gigascience. PMID 30715294 DOI: 10.1093/Gigascience/Giz012  0.779
2019 Zheng L, Jiang N, Sang X, Zhang N, Zhang K, Chen H, Yang N, Feng Y, Chen R, Suo X, Chen Q. In-depth analysis of the genome of Trypanosoma evansi, an etiologic agent of surra. Science China. Life Sciences. PMID 30685829 DOI: 10.1007/s11427-018-9473-8  0.451
2018 Jiang N, Zhang C, Liu JY, Guo ZH, Zhang ZY, Han CG, Wang Y. Development of Beet necrotic yellow vein virus-based vectors for multiple-gene expression and guide RNA delivery in plant genome editing. Plant Biotechnology Journal. PMID 30565826 DOI: 10.1111/pbi.13055  0.326
2018 Dai AH, Yang SX, Zhou HK, Tang KQ, Li G, Leng JT, Yu H, Zhang YH, Gao JS, Yang X, Guo YJ, Jiang N, Feng XZ. Evolution and Expression Divergence of the CYP78A Subfamily Genes in Soybean. Genes. 9. PMID 30544641 DOI: 10.3390/Genes9120611  0.354
2018 Ou S, Chen J, Jiang N. Assessing genome assembly quality using the LTR Assembly Index (LAI). Nucleic Acids Research. PMID 30107434 DOI: 10.1093/Nar/Gky730  0.814
2018 Cerbin S, Jiang N. Duplication of host genes by transposable elements. Current Opinion in Genetics & Development. 49: 63-69. PMID 29571044 DOI: 10.1016/J.Gde.2018.03.005  0.816
2018 Zhao D, Hamilton JP, Vaillancourt B, Zhang W, Eizenga GC, Cui Y, Jiang J, Buell CR, Jiang N. The unique epigenetic features of Pack-MULEs and their impact on chromosomal base composition and expression spectrum. Nucleic Acids Research. PMID 29415183 DOI: 10.1093/Nar/Gky091  0.489
2018 Zhao D, Hamilton JP, Vaillancourt B, Zhang W, Eizenga GC, Cui Y, Jiang J, Buell CR, Jiang N. The unique epigenetic features of Pack-MULEs and their impact on chromosomal base composition and expression spectrum. Nucleic Acids Research. PMID 29365184 DOI: 10.1093/nar/gky025  0.389
2018 VanBuren R, Wai CM, Ou S, Pardo J, Bryant D, Jiang N, Mockler TC, Edger P, Michael TP. Extreme haplotype variation in the desiccation-tolerant clubmoss Selaginella lepidophylla. Nature Communications. 9: 13. PMID 29296019 DOI: 10.1038/S41467-017-02546-5  0.802
2017 Edger PP, VanBuren R, Colle M, Poorten TJ, Wai CM, Niederhuth CE, Alger EI, Ou S, Acharya CB, Wang J, Callow P, McKain MR, Shi J, Collier C, Xiong Z, ... ... Jiang N, et al. Single-molecule sequencing and optical mapping yields an improved genome of woodland strawberry (Fragaria vesca) with chromosome-scale contiguity. Gigascience. PMID 29253147 DOI: 10.1093/Gigascience/Gix124  0.781
2017 Ou S, Jiang N. LTR_retriever: a highly accurate and sensitive program for identification of long terminal-repeat retrotransposons. Plant Physiology. PMID 29233850 DOI: 10.1104/Pp.17.01310  0.802
2017 Vieler A, Wu G, Tsai CH, Bullard B, Cornish AJ, Harvey C, Reca IB, Thornburg C, Achawanantakun R, Buehl CJ, Campbell MS, Cavalier D, Childs KL, Clark TJ, Deshpande R, ... ... Jiang N, et al. Correction: Genome, Functional Gene Annotation, and Nuclear Transformation of the Heterokont Oleaginous Alga Nannochloropsis oceanica CCMP1779. Plos Genetics. 13: e1006802. PMID 28542203 DOI: 10.1371/journal.pgen.1006802  0.353
2017 Gao J, Yang S, Cheng W, Fu Y, Leng J, Yuan X, Jiang N, Ma J, Feng X. GmILPA1, Encoding an anaphase-promoting complex-like Protein, affects Leaf Petiole Angle. Plant Physiology. PMID 28336772 DOI: 10.1104/Pp.16.00074  0.38
2016 Wang Y, Xiong D, Jiang N, Li X, Yang Q, Tian C. High-resolution transcript profiling reveals shoot abscission process of spruce dwarf mistletoe Arceuthobium sichuanense in response to ethephon. Scientific Reports. 6: 38889. PMID 27941945 DOI: 10.1038/srep38889  0.311
2016 Zhao D, Hamilton JP, Hardigan M, Yin D, He T, Vaillancourt B, Reynoso M, Pauluzzi G, Funkhouser S, Cui Y, Bailey-Serres J, Jiang J, Buell CR, Jiang N. Analysis of Ribosome-Associated mRNAs in Rice Reveals the Importance of Transcript Size and GC Content in Translation. G3 (Bethesda, Md.). PMID 27852012 DOI: 10.1534/G3.116.036020  0.383
2016 Jiang N, Zhang F, Wu J, Chen Y, Hu X, Fang O, Leach LJ, Wang D, Luo Z. A highly robust and optimized sequence-based approach for genetic polymorphism discovery and genotyping in large plant populations. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 27316437 DOI: 10.1007/s00122-016-2736-9  0.434
2016 Gao D, Zhao D, Abernathy B, Iwata-Otsubo A, Herrera-Estrella A, Jiang N, Jackson SA. Dynamics of a Novel Highly Repetitive CACTA Family in Common Bean (Phaseolus vulgaris). G3 (Bethesda, Md.). PMID 27185400 DOI: 10.1534/G3.116.028761  0.605
2016 Kang H, Zhu D, Lin R, Opiyo SO, Jiang N, Shiu SH, Wang GL. A novel method for identifying polymorphic transposable elements via scanning of high-throughput short reads. Dna Research : An International Journal For Rapid Publication of Reports On Genes and Genomes. PMID 27098848 DOI: 10.1093/Dnares/Dsw011  0.51
2016 Zhao D, Ferguson AA, Jiang N. What makes up plant genomes: The vanishing line between transposable elements and genes. Biochimica Et Biophysica Acta. 1859: 366-80. PMID 26709091 DOI: 10.1016/J.Bbagrm.2015.12.005  0.573
2016 Zhao D, Ferguson AA, Jiang N. What makes up plant genomes: The vanishing line between transposable elements and genes Biochimica Et Biophysica Acta - Gene Regulatory Mechanisms. 1859: 366-380. DOI: 10.1016/j.bbagrm.2015.12.005  0.471
2015 Zhao B, Dai A, Wei H, Yang S, Wang B, Jiang N, Feng X. Arabidopsis KLU homologue GmCYP78A72 regulates seed size in soybean. Plant Molecular Biology. PMID 26482479 DOI: 10.1007/S11103-015-0392-0  0.332
2015 Gao D, Jiang N, Wing RA, Jiang J, Jackson SA. Transposons play an important role in the evolution and diversification of centromeres among closely related species. Frontiers in Plant Science. 6: 216. PMID 25904926 DOI: 10.3389/Fpls.2015.00216  0.487
2015 Zhao D, Ferguson A, Jiang N. Transposition of a rice Mutator-like element in the yeast Saccharomyces cerevisiae. The Plant Cell. 27: 132-48. PMID 25587002 DOI: 10.1105/Tpc.114.128488  0.507
2015 Law M, Childs KL, Campbell MS, Stein JC, Olson AJ, Holt C, Panchy N, Lei J, Jiao D, Andorf CM, Lawrence CJ, Ware D, Shiu SH, Sun Y, Jiang N, et al. Automated update, revision, and quality control of the maize genome annotations using MAKER-P improves the B73 RefGen_v3 gene models and identifies new genes. Plant Physiology. 167: 25-39. PMID 25384563 DOI: 10.1104/Pp.114.245027  0.526
2014 Jiang N, Wang L, Chen J, Wang L, Leach L, Luo Z. Conserved and divergent patterns of DNA methylation in higher vertebrates. Genome Biology and Evolution. 6: 2998-3014. PMID 25355807 DOI: 10.1093/gbe/evu238  0.307
2014 Feng P, Jiang N, Liu N. Prediction of DNase I hypersensitive sites by using pseudo nucleotide compositions. Thescientificworldjournal. 2014: 740506. PMID 25215331 DOI: 10.1155/2014/740506  0.346
2014 Zhao D, Jiang N. Nested insertions and accumulation of indels are negatively correlated with abundance of Mutator-like transposable elements in maize and rice Plos One. 9. PMID 24475224 DOI: 10.1371/Journal.Pone.0087069  0.531
2014 Wang L, Jiang N, Wang L, Fang O, Leach LJ, Hu X, Luo Z. 3' Untranslated regions mediate transcriptional interference between convergent genes both locally and ectopically in Saccharomyces cerevisiae. Plos Genetics. 10: e1004021. PMID 24465217 DOI: 10.1371/journal.pgen.1004021  0.357
2014 Xu Y, Jiang N, Zou Z, Tu Z, Chen A, Zhao Q, Xiang Z, He N. Retrotransposon "Qian" mediated segmental duplication in silkworm, Bombyx mori. Insect Biochemistry and Molecular Biology. 46: 9-16. PMID 24462715 DOI: 10.1016/J.Ibmb.2014.01.002  0.459
2014 Yang S, Liu Y, Jiang N, Chen J, Leach L, Luo Z, Wang M. Genome-wide eQTLs and heritability for gene expression traits in unrelated individuals. Bmc Genomics. 15: 13. PMID 24405759 DOI: 10.1186/1471-2164-15-13  0.392
2014 Campbell MS, Law M, Holt C, Stein JC, Moghe GD, Hufnagel DE, Lei J, Achawanantakun R, Jiao D, Lawrence CJ, Ware D, Shiu SH, Childs KL, Sun Y, Jiang N, et al. MAKER-P: a tool kit for the rapid creation, management, and quality control of plant genome annotations. Plant Physiology. 164: 513-24. PMID 24306534 DOI: 10.1104/Pp.113.230144  0.509
2014 Jiang N. Computational methods for identification of DNA transposons. Methods in Molecular Biology (Clifton, N.J.). 1057: 289-304. PMID 23918437 DOI: 10.1007/978-1-62703-568-2_21  0.485
2014 Jiang N. Overview of repeat annotation and de novo repeat identification. Methods in Molecular Biology (Clifton, N.J.). 1057: 275-87. PMID 23918436 DOI: 10.1007/978-1-62703-568-2_20  0.603
2013 Ferguson AA, Zhao D, Jiang N. Selective acquisition and retention of genomic sequences by Pack-Mutator-like elements based on guanine-cytosine content and the breadth of expression. Plant Physiology. 163: 1419-32. PMID 24028844 DOI: 10.1104/pp.113.223271  0.463
2013 Song GQ, Walworth A, Zhao D, Jiang N, Hancock JF. The Vaccinium corymbosum FLOWERING LOCUS T-like gene (VcFT): a flowering activator reverses photoperiodic and chilling requirements in blueberry. Plant Cell Reports. 32: 1759-69. PMID 23907615 DOI: 10.1007/S00299-013-1489-Z  0.327
2013 Ming R, VanBuren R, Liu Y, Yang M, Han Y, Li LT, Zhang Q, Kim MJ, Schatz MC, Campbell M, Li J, Bowers JE, Tang H, Lyons E, Ferguson AA, ... ... Jiang N, et al. Genome of the long-living sacred lotus (Nelumbo nucifera Gaertn.). Genome Biology. 14: R41. PMID 23663246 DOI: 10.1186/Gb-2013-14-5-R41  0.519
2013 Smith JJ, Kuraku S, Holt C, Sauka-Spengler T, Jiang N, Campbell MS, Yandell MD, Manousaki T, Meyer A, Bloom OE, Morgan JR, Buxbaum JD, Sachidanandam R, Sims C, Garruss AS, et al. Sequencing of the sea lamprey (Petromyzon marinus) genome provides insights into vertebrate evolution. Nature Genetics. 45: 415-21, 421e1-2. PMID 23435085 DOI: 10.1038/Ng.2568  0.578
2013 Ferguson AA, Zhao D, Jiang N. Selective Acquisition and Retention of Genomic Sequences by Pack-Mutator-Like Elements Based on Guanine-Cytosine Content and the Breadth of Expression Plant Physiology. 163: 1419-1432. DOI: 10.1104/Pp.113.223271  0.55
2012 Vieler A, Wu G, Tsai CH, Bullard B, Cornish AJ, Harvey C, Reca IB, Thornburg C, Achawanantakun R, Buehl CJ, Campbell MS, Cavalier D, Childs KL, Clark TJ, Deshpande R, ... ... Jiang N, et al. Genome, functional gene annotation, and nuclear transformation of the heterokont oleaginous alga Nannochloropsis oceanica CCMP1779. Plos Genetics. 8: e1003064. PMID 23166516 DOI: 10.1371/Journal.Pgen.1003064  0.494
2012 Ferguson AA, Jiang N. Mutator-like elements with multiple long terminal inverted repeats in plants. Comparative and Functional Genomics. 2012: 695827. PMID 22474413 DOI: 10.1155/2012/695827  0.533
2012 Davidson RM, Gowda M, Moghe G, Lin H, Vaillancourt B, Shiu SH, Jiang N, Robin Buell C. Comparative transcriptomics of three Poaceae species reveals patterns of gene expression evolution. The Plant Journal : For Cell and Molecular Biology. 71: 492-502. PMID 22443345 DOI: 10.1111/J.1365-313X.2012.05005.X  0.516
2012 Wang M, Jiang N, Jia T, Leach L, Cockram J, Comadran J, Shaw P, Waugh R, Ramsay L, Thomas B, Luo Z. Genome-wide association mapping of agronomic and morphologic traits in highly structured populations of barley cultivars. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 124: 233-46. PMID 21915710 DOI: 10.1007/s00122-011-1697-2  0.358
2011 Ferguson AA, Jiang N. Pack-MULEs: Recycling and reshaping genes through GC-biased acquisition. Mobile Genetic Elements. 1: 135-138. PMID 22016862 DOI: 10.4161/mge.1.2.16948  0.514
2011 Jiang N, Ferguson AA, Slotkin RK, Lisch D. Pack-Mutator-like transposable elements (Pack-MULEs) induce directional modification of genes through biased insertion and DNA acquisition. Proceedings of the National Academy of Sciences of the United States of America. 108: 1537-42. PMID 21220310 DOI: 10.1073/Pnas.1010814108  0.437
2011 Ferguson AA, Jiang N. Pack-MULEs Mobile Genetic Elements. 1: 135-138. DOI: 10.4161/Mge.1.2.16948  0.604
2011 Davidson RM, Hansey CN, Gowda M, Childs KL, Lin H, Vaillancourt B, Sekhon RS, de Leon N, Kaeppler SM, Jiang N, Buell CR. Utility of RNA Sequencing for Analysis of Maize Reproductive Transcriptomes The Plant Genome. 4: 191-203. DOI: 10.3835/Plantgenome2011.05.0015  0.465
2010 Ammiraju JS, Fan C, Yu Y, Song X, Cranston KA, Pontaroli AC, Lu F, Sanyal A, Jiang N, Rambo T, Currie J, Collura K, Talag J, Bennetzen JL, Chen M, et al. Spatio-temporal patterns of genome evolution in allotetraploid species of the genus Oryza. The Plant Journal : For Cell and Molecular Biology. 63: 430-42. PMID 20487382 DOI: 10.1111/J.1365-313X.2010.04251.X  0.515
2010 Zhang H, Liang W, Yang X, Luo X, Jiang N, Ma H, Zhang D. Carbon starved anther encodes a MYB domain protein that regulates sugar partitioning required for rice pollen development. The Plant Cell. 22: 672-89. PMID 20305120 DOI: 10.1105/Tpc.109.073668  0.307
2010 Vogel JP, Garvin DF, Mockler TC, Schmutz J, Rokhsar D, Bevan MW, Barry K, Lucas S, Harmon-Smith M, Lail K, Tice H, Grimwood J, McKenzie N, Huo N, Gu YQ, ... ... Jiang N, et al. Genome sequencing and analysis of the model grass Brachypodium distachyon Nature. 463: 763-768. PMID 20148030 DOI: 10.1038/Nature08747  0.806
2010 Druka A, Potokina E, Luo Z, Jiang N, Chen X, Kearsey M, Waugh R. Expression quantitative trait loci analysis in plants. Plant Biotechnology Journal. 8: 10-27. PMID 20055957 DOI: 10.1111/j.1467-7652.2009.00460.x  0.333
2009 Schnable PS, Ware D, Fulton RS, Stein JC, Wei F, Pasternak S, Liang C, Zhang J, Fulton L, Graves TA, Minx P, Reily AD, Courtney L, Kruchowski SS, Tomlinson C, ... ... Jiang N, et al. The B73 maize genome: complexity, diversity, and dynamics. Science (New York, N.Y.). 326: 1112-5. PMID 19965430 DOI: 10.1126/Science.1178534  0.837
2009 Wei F, Stein JC, Liang C, Zhang J, Fulton RS, Baucom RS, De Paoli E, Zhou S, Yang L, Han Y, Pasternak S, Narechania A, Zhang L, Yeh CT, Ying K, ... ... Jiang N, et al. Detailed analysis of a contiguous 22-Mb region of the maize genome. Plos Genetics. 5: e1000728. PMID 19936048 DOI: 10.1371/Journal.Pgen.1000728  0.834
2009 Gao D, Gill N, Kim HR, Walling JG, Zhang W, Fan C, Yu Y, Ma J, SanMiguel P, Jiang N, Cheng Z, Wing RA, Jiang J, Jackson SA. A lineage-specific centromere retrotransposon in Oryza brachyantha. The Plant Journal : For Cell and Molecular Biology. 60: 820-31. PMID 19702667 DOI: 10.1111/J.1365-313X.2009.04005.X  0.564
2009 Jiang N, Gao D, Xiao H, van der Knaap E. Genome organization of the tomato sun locus and characterization of the unusual retrotransposon Rider. The Plant Journal : For Cell and Molecular Biology. 60: 181-93. PMID 19508380 DOI: 10.1111/J.1365-313X.2009.03946.X  0.595
2009 Hanada K, Vallejo V, Nobuta K, Slotkin RK, Lisch D, Meyers BC, Shiu SH, Jiang N. The functional role of pack-MULEs in rice inferred from purifying selection and expression profile. The Plant Cell. 21: 25-38. PMID 19136648 DOI: 10.1105/Tpc.108.063206  0.375
2009 Jiang N, Gao D, Xiao H, van der Knaap E. Genome organization of the tomatosunlocus and characterization of the unusual retrotransposonRider The Plant Journal. 60: 181-193. DOI: 10.1111/j.1365-313X.2009.03946.x  0.375
2008 Ammiraju JS, Lu F, Sanyal A, Yu Y, Song X, Jiang N, Pontaroli AC, Rambo T, Currie J, Collura K, Talag J, Fan C, Goicoechea JL, Zuccolo A, Chen J, et al. Dynamic evolution of oryza genomes is revealed by comparative genomic analysis of a genus-wide vertical data set. The Plant Cell. 20: 3191-209. PMID 19098269 DOI: 10.1105/Tpc.108.063727  0.73
2008 Ming R, Hou S, Feng Y, Yu Q, Dionne-Laporte A, Saw JH, Senin P, Wang W, Ly BV, Lewis KL, Salzberg SL, Feng L, Jones MR, Skelton RL, Murray JE, ... ... Jiang N, et al. The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus). Nature. 452: 991-6. PMID 18432245 DOI: 10.1038/Nature06856  0.711
2008 Xiao H, Jiang N, Schaffner E, Stockinger EJ, van der Knaap E. A retrotransposon-mediated gene duplication underlies morphological variation of tomato fruit. Science (New York, N.Y.). 319: 1527-30. PMID 18339939 DOI: 10.1126/Science.1153040  0.52
2007 Campbell MA, Zhu W, Jiang N, Lin H, Ouyang S, Childs KL, Haas BJ, Hamilton JP, Buell CR. Identification and characterization of lineage-specific genes within the poaceae Plant Physiology. 145: 1311-1322. PMID 17951464 DOI: 10.1104/Pp.107.104513  0.534
2007 Ammiraju JS, Zuccolo A, Yu Y, Song X, Piegu B, Chevalier F, Walling JG, Ma J, Talag J, Brar DS, SanMiguel PJ, Jiang N, Jackson SA, Panaud O, Wing RA. Evolutionary dynamics of an ancient retrotransposon family provides insights into evolution of genome size in the genus Oryza. The Plant Journal : For Cell and Molecular Biology. 52: 342-51. PMID 17764506 DOI: 10.1111/J.1365-313X.2007.03242.X  0.541
2007 Zhang S, Gu YQ, Singh J, Coleman-Derr D, Brar DS, Jiang N, Lemaux PG. New insights into Oryza genome evolution: high gene colinearity and differential retrotransposon amplification. Plant Molecular Biology. 64: 589-600. PMID 17534720 DOI: 10.1007/S11103-007-9178-3  0.546
2007 Yan H, He P, Cheng HR, Shen A, Jiang N. Cloning, sequencing and characterization of the alpha-aminoadipate reductase gene (LYS2) from Saccharomycopsis fibuligera. Yeast (Chichester, England). 24: 189-99. PMID 17351909 DOI: 10.1002/yea.1447  0.307
2006 Holligan D, Zhang X, Jiang N, Pritham EJ, Wessler SR. The transposable element landscape of the model legume Lotus japonicus. Genetics. 174: 2215-28. PMID 17028332 DOI: 10.1534/Genetics.106.062752  0.844
2005 Zhang S, Chen C, Li L, Meng L, Singh J, Jiang N, Deng XW, He ZH, Lemaux PG. Evolutionary expansion, gene structure, and expression of the rice wall-associated kinase gene family. Plant Physiology. 139: 1107-24. PMID 16286450 DOI: 10.1104/Pp.105.069005  0.437
2004 Jiang N, Bao Z, Zhang X, Eddy SR, Wessler SR. Pack-MULE transposable elements mediate gene evolution in plants. Nature. 431: 569-73. PMID 15457261 DOI: 10.1038/Nature02953  0.776
2004 Feltus FA, Wan J, Schulze SR, Estill JC, Jiang N, Paterson AH. An SNP resource for rice genetics and breeding based on subspecies indica and japonica genome alignments. Genome Research. 14: 1812-9. PMID 15342564 DOI: 10.1101/Gr.2479404  0.449
2004 Zhang X, Jiang N, Feschotte C, Wessler SR. PIF- and Pong-like transposable elements: distribution, evolution and relationship with Tourist-like miniature inverted-repeat transposable elements. Genetics. 166: 971-86. PMID 15020481 DOI: 10.1534/Genetics.166.2.971  0.813
2004 Jiang N, Feschotte C, Zhang X, Wessler SR. Using rice to understand the origin and amplification of miniature inverted repeat transposable elements (MITEs). Current Opinion in Plant Biology. 7: 115-9. PMID 15003209 DOI: 10.1016/J.Pbi.2004.01.004  0.792
2003 Jiang N, Bao Z, Zhang X, Hirochika H, Eddy SR, McCouch SR, Wessler SR. An active DNA transposon family in rice. Nature. 421: 163-7. PMID 12520302 DOI: 10.1038/Nature01214  0.742
2002 Jiang N, Jordan IK, Wessler SR. Dasheng and RIRE2. A nonautonomous long terminal repeat element and its putative autonomous partner in the rice genome. Plant Physiology. 130: 1697-705. PMID 12481052 DOI: 10.1104/Pp.015412  0.728
2002 Jiang N, Bao Z, Temnykh S, Cheng Z, Jiang J, Wing RA, McCouch SR, Wessler SR. Dasheng: a recently amplified nonautonomous long terminal repeat element that is a major component of pericentromeric regions in rice. Genetics. 161: 1293-305. PMID 12136031  0.681
2002 Peterson DG, Schulze SR, Sciara EB, Lee SA, Bowers JE, Nagel A, Jiang N, Tibbitts DC, Wessler SR, Paterson AH. Integration of Cot analysis, DNA cloning, and high-throughput sequencing facilitates genome characterization and gene discovery. Genome Research. 12: 795-807. PMID 11997346 DOI: 10.1101/Gr.226102  0.707
2002 Feschotte C, Jiang N, Wessler SR. Plant transposable elements: where genetics meets genomics. Nature Reviews. Genetics. 3: 329-41. PMID 11988759 DOI: 10.1038/Nrg793  0.803
2001 Jiang N, Wessler SR. Insertion preference of maize and rice miniature inverted repeat transposable elements as revealed by the analysis of nested elements. The Plant Cell. 13: 2553-64. PMID 11701888 DOI: 10.1105/Tpc.010235  0.7
2001 Zhang X, Feschotte C, Zhang Q, Jiang N, Eggleston WB, Wessler SR. P instability factor: an active maize transposon system associated with the amplification of Tourist-like MITEs and a new superfamily of transposases. Proceedings of the National Academy of Sciences of the United States of America. 98: 12572-7. PMID 11675493 DOI: 10.1073/Pnas.211442198  0.79
2001 Jiang N, Wessler SR. Insertion Preference of Maize and Rice Miniature Inverted Repeat Transposable Elements as Revealed by the Analysis of Nested Elements The Plant Cell. 13: 2553-2564. DOI: 10.1105/tpc.010235  0.59
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