| Year |
Citation |
Score |
| 2023 |
Novoa Rama E, Bailey M, Kumar S, Leone C, den Bakker HC, Thippareddi H, Singh M. Characterizing the gut microbiome of broilers raised under conventional and no antibiotics ever practices. Poultry Science. 102: 102832. PMID 37343348 DOI: 10.1016/j.psj.2023.102832 |
0.302 |
|
| 2018 |
Erickson MC, Liao JY, Payton AS, Cook PW, Den Bakker HC, Bautista J, Pérez JCD. Pre-harvest internalization and surface survival of Salmonella and Escherichia coli O157:H7 sprayed onto different lettuce cultivars under field and growth chamber conditions. International Journal of Food Microbiology. 291: 197-204. PMID 30551016 DOI: 10.1016/j.ijfoodmicro.2018.12.001 |
0.364 |
|
| 2015 |
Bergholz TM, den Bakker HC, Katz LS, Silk BJ, Jackson KA, Kucerova Z, Joseph LA, Turnsek M, Gladney LM, Halpin JL, Xavier K, Gossack J, Ward TJ, Frace M, Tarr CL. Evolutionary Relationships of Outbreak-associated Listeria monocytogenes Strains of Serotypes 1/2a and 1/2b Determined by Whole Genome Sequencing. Applied and Environmental Microbiology. PMID 26590286 DOI: 10.1128/Aem.02440-15 |
0.364 |
|
| 2015 |
Toomer KH, Chen X, Naito M, Mondo SJ, den Bakker HC, VanKuren NW, Lekberg Y, Morton JB, Pawlowska TE. Molecular evolution patterns reveal life history features of mycoplasma-related endobacteria associated with arbuscular mycorrhizal fungi. Molecular Ecology. 24: 3485-500. PMID 26011293 DOI: 10.1111/Mec.13250 |
0.336 |
|
| 2014 |
Deng X, Desai PT, den Bakker HC, Mikoleit M, Tolar B, Trees E, Hendriksen RS, Frye JG, Porwollik S, Weimer BC, Wiedmann M, Weinstock GM, Fields PI, McClelland M. Genomic epidemiology of Salmonella enterica serotype Enteritidis based on population structure of prevalent lineages. Emerging Infectious Diseases. 20: 1481-9. PMID 25147968 DOI: 10.3201/Eid2009.131095 |
0.367 |
|
| 2013 |
Switt AI, den Bakker HC, Vongkamjan K, Hoelzer K, Warnick LD, Cummings KJ, Wiedmann M. Salmonella bacteriophage diversity reflects host diversity on dairy farms. Food Microbiology. 36: 275-85. PMID 24010608 DOI: 10.1016/J.Fm.2013.06.014 |
0.307 |
|
| 2013 |
Vankuren NW, den Bakker HC, Morton JB, Pawlowska TE. Ribosomal RNA gene diversity, effective population size, and evolutionary longevity in asexual glomeromycota. Evolution; International Journal of Organic Evolution. 67: 207-24. PMID 23289573 DOI: 10.1111/J.1558-5646.2012.01747.X |
0.652 |
|
| 2011 |
den Bakker HC, Moreno Switt AI, Govoni G, Cummings CA, Ranieri ML, Degoricija L, Hoelzer K, Rodriguez-Rivera LD, Brown S, Bolchacova E, Furtado MR, Wiedmann M. Genome sequencing reveals diversification of virulence factor content and possible host adaptation in distinct subpopulations of Salmonella enterica. Bmc Genomics. 12: 425. PMID 21859443 DOI: 10.1186/1471-2164-12-425 |
0.415 |
|
| 2010 |
den Bakker HC, Cummings CA, Ferreira V, Vatta P, Orsi RH, Degoricija L, Barker M, Petrauskene O, Furtado MR, Wiedmann M. Comparative genomics of the bacterial genus Listeria: Genome evolution is characterized by limited gene acquisition and limited gene loss. Bmc Genomics. 11: 688. PMID 21126366 DOI: 10.1186/1471-2164-11-688 |
0.305 |
|
| 2010 |
den Bakker HC, Vankuren NW, Morton JB, Pawlowska TE. Clonality and recombination in the life history of an asexual arbuscular mycorrhizal fungus. Molecular Biology and Evolution. 27: 2474-86. PMID 20566475 DOI: 10.1093/Molbev/Msq155 |
0.711 |
|
| 2008 |
den Bakker HC, Didelot X, Fortes ED, Nightingale KK, Wiedmann M. Lineage specific recombination rates and microevolution in Listeria monocytogenes. Bmc Evolutionary Biology. 8: 277. PMID 18842152 DOI: 10.1186/1471-2148-8-277 |
0.395 |
|
| 2007 |
Osmundson TW, Halling RE, den Bakker HC. Morphological and molecular evidence supporting an arbutoid mycorrhizal relationship in the Costa Rican páramo. Mycorrhiza. 17: 217-22. PMID 17216498 DOI: 10.1007/s00572-006-0098-x |
0.326 |
|
| 2004 |
Den Bakker HC, Zuccarello GC, Kuyper TW, Noordeloos ME. Evolution and host specificity in the ectomycorrhizal genus Leccinum. The New Phytologist. 163: 201-215. PMID 33873790 DOI: 10.1111/j.1469-8137.2004.01090.x |
0.327 |
|
| Low-probability matches (unlikely to be authored by this person) |
| 2013 |
den Bakker HC, Desjardins CA, Griggs AD, Peters JE, Zeng Q, Young SK, Kodira CD, Yandava C, Hepburn TA, Haas BJ, Birren BW, Wiedmann M. Evolutionary dynamics of the accessory genome of Listeria monocytogenes. Plos One. 8: e67511. PMID 23825666 DOI: 10.1371/Journal.Pone.0067511 |
0.295 |
|
| 2013 |
Moreno Switt AI, Orsi RH, den Bakker HC, Vongkamjan K, Altier C, Wiedmann M. Genomic characterization provides new insight into Salmonella phage diversity. Bmc Genomics. 14: 481. PMID 23865498 DOI: 10.1186/1471-2164-14-481 |
0.293 |
|
| 2019 |
Zhang S, Li S, Gu W, den Bakker H, Boxrud D, Taylor A, Roe C, Driebe E, Engelthaler DM, Allard M, Brown E, McDermott P, Zhao S, Bruce BB, Trees E, et al. Zoonotic Source Attribution of Salmonella enterica Serotype Typhimurium Using Genomic Surveillance Data, United States. Emerging Infectious Diseases. 25: 82-91. PMID 30561314 DOI: 10.3201/Eid2501.180835 |
0.293 |
|
| 2010 |
den Bakker HC, Bundrant BN, Fortes ED, Orsi RH, Wiedmann M. A population genetics-based and phylogenetic approach to understanding the evolution of virulence in the genus Listeria. Applied and Environmental Microbiology. 76: 6085-100. PMID 20656873 DOI: 10.1128/Aem.00447-10 |
0.292 |
|
| 2014 |
Rodriguez-Rivera LD, Moreno Switt AI, Degoricija L, Fang R, Cummings CA, Furtado MR, Wiedmann M, den Bakker HC. Genomic characterization of Salmonella Cerro ST367, an emerging Salmonella subtype in cattle in the United States. Bmc Genomics. 15: 427. PMID 24898914 DOI: 10.1186/1471-2164-15-427 |
0.285 |
|
| 2004 |
den Bakker HC, Gravendeel B, Kuyper TW. An ITS phylogeny of Leccinum and an analysis of the evolution of minisatellite-like sequences within ITS1. Mycologia. 96: 102-18. PMID 21148833 |
0.266 |
|
| 2011 |
Orsi RH, den Bakker HC, Wiedmann M. Listeria monocytogenes lineages: Genomics, evolution, ecology, and phenotypic characteristics. International Journal of Medical Microbiology : Ijmm. 301: 79-96. PMID 20708964 DOI: 10.1016/J.Ijmm.2010.05.002 |
0.262 |
|
| 2012 |
Vongkamjan K, Switt AM, den Bakker HC, Fortes ED, Wiedmann M. Silage collected from dairy farms harbors an abundance of listeriaphages with considerable host range and genome size diversity. Applied and Environmental Microbiology. 78: 8666-75. PMID 23042180 DOI: 10.1128/Aem.01859-12 |
0.259 |
|
| 2016 |
Chen P, den Bakker HC, Korlach J, Kong N, Storey DB, Paxinos EE, Ashby M, Clark T, Luong K, Wiedmann M, Weimer BC. Comparative Genomics Reveal the Diversity of Restriction Methylation Systems in Listeria monocytogenes. Applied and Environmental Microbiology. PMID 27836852 DOI: 10.1128/Aem.02091-16 |
0.257 |
|
| 2012 |
Moreno Switt AI, den Bakker HC, Cummings CA, Rodriguez-Rivera LD, Govoni G, Raneiri ML, Degoricija L, Brown S, Hoelzer K, Peters JE, Bolchacova E, Furtado MR, Wiedmann M. Identification and characterization of novel Salmonella mobile elements involved in the dissemination of genes linked to virulence and transmission. Plos One. 7: e41247. PMID 22911766 DOI: 10.1371/Journal.Pone.0041247 |
0.251 |
|
| 2007 |
den Bakker HC, Zuccarello GC, Kuyper TW, Noordeloos ME. Phylogeographic patterns in Leccinum sect. Scabra and the status of the arctic-alpine species L. rotundifoliae. Mycological Research. 111: 663-72. PMID 17604144 DOI: 10.1016/j.mycres.2007.03.008 |
0.248 |
|
| 2012 |
Ivy RA, Ranieri ML, Martin NH, den Bakker HC, Xavier BM, Wiedmann M, Boor KJ. Identification and characterization of psychrotolerant sporeformers associated with fluid milk production and processing. Applied and Environmental Microbiology. 78: 1853-64. PMID 22247129 DOI: 10.1128/Aem.06536-11 |
0.235 |
|
| 2013 |
den Bakker HC, Manuel CS, Fortes ED, Wiedmann M, Nightingale KK. Genome sequencing identifies Listeria fleischmannii subsp. coloradonensis subsp. nov., isolated from a ranch. International Journal of Systematic and Evolutionary Microbiology. 63: 3257-68. PMID 23524352 DOI: 10.1099/Ijs.0.048587-0 |
0.232 |
|
| 2015 |
Stasiewicz MJ, Oliver HF, Wiedmann M, den Bakker HC. Whole-Genome Sequencing Allows for Improved Identification of Persistent Listeria monocytogenes in Food-Associated Environments. Applied and Environmental Microbiology. 81: 6024-37. PMID 26116683 DOI: 10.1128/Aem.01049-15 |
0.229 |
|
| 2012 |
den Bakker HC, Bowen BM, Rodriguez-Rivera LD, Wiedmann M. FSL J1-208, a virulent uncommon phylogenetic lineage IV Listeria monocytogenes strain with a small chromosome size and a putative virulence plasmid carrying internalin-like genes. Applied and Environmental Microbiology. 78: 1876-89. PMID 22247147 DOI: 10.1128/Aem.06969-11 |
0.225 |
|
| 2014 |
Denes T, Vongkamjan K, Ackermann HW, Moreno Switt AI, Wiedmann M, den Bakker HC. Comparative genomic and morphological analyses of Listeria phages isolated from farm environments. Applied and Environmental Microbiology. 80: 4616-25. PMID 24837381 DOI: 10.1128/Aem.00720-14 |
0.222 |
|
| 2010 |
Bergholz TM, den Bakker HC, Fortes ED, Boor KJ, Wiedmann M. Salt stress phenotypes in Listeria monocytogenes vary by genetic lineage and temperature. Foodborne Pathogens and Disease. 7: 1537-49. PMID 20707723 DOI: 10.1089/Fpd.2010.0624 |
0.22 |
|
| 2018 |
Toledo V, den Bakker HC, Hormazábal JC, González-Rocha G, Bello-Toledo H, Toro M, Moreno-Switt AI. Genomic Diversity of Isolated from Clinical and Non-Clinical Samples in Chile. Genes. 9. PMID 30072604 DOI: 10.3390/genes9080396 |
0.209 |
|
| 2017 |
Ahlstrom CA, Manuel CS, Den Bakker HC, Wiedmann M, Nightingale KK. Molecular Ecology of Listeria spp., Salmonella, Escherichia coli O157:H7, and non-O157 Shiga Toxin Producing Escherichia coli in Pristine Natural Environments in Northern Colorado. Journal of Applied Microbiology. PMID 29215770 DOI: 10.1111/Jam.13657 |
0.209 |
|
| 2010 |
den Bakker HC, Fortes ED, Wiedmann M. Multilocus sequence typing of outbreak-associated Listeria monocytogenes isolates to identify epidemic clones. Foodborne Pathogens and Disease. 7: 257-65. PMID 19911921 DOI: 10.1089/Fpd.2009.0342 |
0.208 |
|
| 2022 |
Hudson LK, Chaggar HK, Schamp CN, Claxton ML, Bryan DW, Peters TL, Song Y, Carlin CR, den Bakker HC, Denes TG. Phenotypic characterization and analysis of complete genomes of two distinct strains of the proposed species "L. swaminathanii". Scientific Reports. 12: 9137. PMID 35650389 DOI: 10.1038/s41598-022-13119-y |
0.206 |
|
| 2017 |
Carroll LM, Wiedmann M, den Bakker H, Siler J, Warchocki S, Kent D, Lyalina S, Davis M, Sischo W, Besser T, Warnick LD, Pereira RV. Whole-Genome Sequencing of Drug-Resistant Salmonella enterica Isolated from Dairy Cattle and Humans in New York and Washington States Reveals Source and Geographic Associations. Applied and Environmental Microbiology. PMID 28389536 DOI: 10.1128/Aem.00140-17 |
0.195 |
|
| 2013 |
Ranieri ML, Shi C, Moreno Switt AI, den Bakker HC, Wiedmann M. Comparison of typing methods with a new procedure based on sequence characterization for Salmonella serovar prediction. Journal of Clinical Microbiology. 51: 1786-97. PMID 23554194 DOI: 10.1128/Jcm.03201-12 |
0.194 |
|
| 2014 |
Moreno Switt AI, Andrus AD, Ranieri ML, Orsi RH, Ivy R, den Bakker HC, Martin NH, Wiedmann M, Boor KJ. Genomic comparison of sporeforming bacilli isolated from milk. Bmc Genomics. 15: 26. PMID 24422886 DOI: 10.1186/1471-2164-15-26 |
0.193 |
|
| 2016 |
Webb HE, Bugarel M, den Bakker HC, Nightingale KK, Granier SA, Scott HM, Loneragan GH. Carbapenem-Resistant Bacteria Recovered from Faeces of Dairy Cattle in the High Plains Region of the USA. Plos One. 11: e0147363. PMID 26824353 DOI: 10.1371/Journal.Pone.0147363 |
0.192 |
|
| 2008 |
Beugelsdijk DC, van der Linde S, Zuccarello GC, den Bakker HC, Draisma SG, Noordeloos ME. A phylogenetic study of Boletus section Boletus in Europe. Persoonia. 20: 1-7. PMID 20467482 DOI: 10.3767/003158508X283692 |
0.192 |
|
| 2018 |
Ayala DI, Chen JC, Bugarel M, Loneragan GH, den Bakker HC, Kottapalli KR, Brashears MM, Nightingale KK. Molecular detection and quantification of viable probiotic strains in animal feedstuffs using the commercial direct fed microbial Lactobacillus animalis NP51 as a model. Journal of Microbiological Methods. 149: 36-43. PMID 29673790 DOI: 10.1016/J.Mimet.2018.04.012 |
0.192 |
|
| 2019 |
Bradley P, den Bakker HC, Rocha EPC, McVean G, Iqbal Z. Ultrafast search of all deposited bacterial and viral genomic data. Nature Biotechnology. 37: 152-159. PMID 30718882 DOI: 10.1038/s41587-018-0010-1 |
0.19 |
|
| 2020 |
Forghani F, Li S, Zhang S, Mann DA, Deng X, den Bakker HC, Diez-Gonzalez F. Detection and Serotyping of and in Wheat Flour by a Quasimetagenomic Approach Assisted by Magnetic Capture, Multiple Displacement Amplification and Real-Time Sequencing. Applied and Environmental Microbiology. PMID 32358002 DOI: 10.1128/Aem.00097-20 |
0.183 |
|
| 2017 |
Ohta N, Norman KN, Norby B, Lawhon SD, Vinasco J, den Bakker H, Loneragan GH, Scott HM. Population dynamics of enteric Salmonella in response to antimicrobial use in beef feedlot cattle. Scientific Reports. 7: 14310. PMID 29085049 DOI: 10.1038/S41598-017-14751-9 |
0.178 |
|
| 2015 |
Weller D, Andrus A, Wiedmann M, den Bakker HC. Listeria booriae sp. nov. and Listeria newyorkensis sp. nov., from food processing environments in the USA. International Journal of Systematic and Evolutionary Microbiology. 65: 286-92. PMID 25342111 DOI: 10.1099/Ijs.0.070839-0 |
0.176 |
|
| 2015 |
Rodriguez-Rivera LD, Bowen BM, den Bakker HC, Duhamel GE, Wiedmann M. Characterization of the cytolethal distending toxin (typhoid toxin) in non-typhoidal Salmonella serovars. Gut Pathogens. 7: 19. PMID 26207144 DOI: 10.1186/S13099-015-0065-1 |
0.164 |
|
| 2014 |
den Bakker HC, Allard MW, Bopp D, Brown EW, Fontana J, Iqbal Z, Kinney A, Limberger R, Musser KA, Shudt M, Strain E, Wiedmann M, Wolfgang WJ. Rapid whole-genome sequencing for surveillance of Salmonella enterica serovar enteritidis. Emerging Infectious Diseases. 20: 1306-14. PMID 25062035 DOI: 10.3201/Eid2008.131399 |
0.161 |
|
| 2019 |
Ohta N, Norby B, Loneragan GH, Vinasco J, den Bakker HC, Lawhon SD, Norman KN, Scott HM. Quantitative dynamics of Salmonella and E. coli in feces of feedlot cattle treated with ceftiofur and chlortetracycline. Plos One. 14: e0225697. PMID 31791047 DOI: 10.1371/Journal.Pone.0225697 |
0.161 |
|
| 2015 |
Bugarel M, den Bakker HC, Nightingale KK, Brichta-Harhay DM, Edrington TS, Loneragan GH. Two Draft Genome Sequences of a New Serovar of Salmonella enterica, Serovar Lubbock. Genome Announcements. 3. PMID 25883279 DOI: 10.1128/Genomea.00215-15 |
0.159 |
|
| 2021 |
Hudson LK, Peters TL, Bryan DW, Song Y, den Bakker HC, Denes TG. Complete Genome Sequences of Three Listeria monocytogenes Bacteriophage Propagation Strains. Microbiology Resource Announcements. 10. PMID 33414304 DOI: 10.1128/MRA.01159-20 |
0.156 |
|
| 2015 |
Tang S, Orsi RH, den Bakker HC, Wiedmann M, Boor KJ, Bergholz TM. Transcriptomic Analysis of the Adaptation of Listeria monocytogenes to Growth on Vacuum-Packed Cold Smoked Salmon. Applied and Environmental Microbiology. 81: 6812-24. PMID 26209664 DOI: 10.1128/Aem.01752-15 |
0.149 |
|
| 2011 |
Bundrant BN, Hutchins T, den Bakker HC, Fortes E, Wiedmann M. Listeriosis outbreak in dairy cattle caused by an unusual Listeria monocytogenes serotype 4b strain. Journal of Veterinary Diagnostic Investigation : Official Publication of the American Association of Veterinary Laboratory Diagnosticians, Inc. 23: 155-8. PMID 21217050 DOI: 10.1177/104063871102300130 |
0.149 |
|
| 2012 |
Perkins GA, den Bakker HC, Burton AJ, Erb HN, McDonough SP, McDonough PL, Parker J, Rosenthal RL, Wiedmann M, Dowd SE, Simpson KW. Equine stomachs harbor an abundant and diverse mucosal microbiota. Applied and Environmental Microbiology. 78: 2522-32. PMID 22307294 DOI: 10.1128/Aem.06252-11 |
0.143 |
|
| 2016 |
Deng X, Den Bakker HC, Hendriksen RS. Genomic Epidemiology: Whole-Genome-Sequencing-Powered Surveillance and Outbreak Investigation of Foodborne Bacterial Pathogens Annual Review of Food Science and Technology. 7: 353-374. DOI: 10.1146/annurev-food-041715-033259 |
0.14 |
|
| 2010 |
Graves LM, Helsel LO, Steigerwalt AG, Morey RE, Daneshvar MI, Roof SE, Orsi RH, Fortes ED, Milillo SR, den Bakker HC, Wiedmann M, Swaminathan B, Sauders BD. Listeria marthii sp. nov., isolated from the natural environment, Finger Lakes National Forest. International Journal of Systematic and Evolutionary Microbiology. 60: 1280-8. PMID 19667380 DOI: 10.1099/Ijs.0.014118-0 |
0.138 |
|
| 2022 |
Reed A, Olszewska MA, Mann A, Novoa Rama E, Thippareddi H, Singh M, den Bakker HC. Draft Genome Sequences of Two Lactobacillus johnsonii and Three Ligilactobacillus salivarius Strains Isolated from Intestinal Microbiomes of Chickens. Microbiology Resource Announcements. 11: e0092521. PMID 35112897 DOI: 10.1128/mra.00925-21 |
0.119 |
|
| 2021 |
Peters TL, Hudson LK, Bryan DW, Song Y, den Bakker HC, Kucerova Z, Denes TG. Complete Genome Sequence of a Serotype 7 Listeria monocytogenes Strain, FSL R9-0915. Microbiology Resource Announcements. 10. PMID 33414303 DOI: 10.1128/MRA.01158-20 |
0.117 |
|
| 2016 |
Deng X, den Bakker HC, Hendriksen RS. Genomic Epidemiology: Whole-Genome-Sequencing-Powered Surveillance and Outbreak Investigation of Foodborne Bacterial Pathogens. Annual Review of Food Science and Technology. 7: 353-74. PMID 26772415 DOI: 10.1146/annurev-food-041715-033259 |
0.116 |
|
| 2021 |
Hudson LK, Orellana LAG, Bryan DW, Moore A, Munafo JP, den Bakker HC, Denes TG. Phylogeny of the Bacillus altitudinis Complex and Characterization of a Newly Isolated Strain with Antilisterial Activity. Journal of Food Protection. PMID 33793813 DOI: 10.4315/JFP-20-498 |
0.115 |
|
| 2015 |
Denes T, den Bakker HC, Tokman JI, Guldimann C, Wiedmann M. Selection and Characterization of Phage-Resistant Mutant Strains of Listeria monocytogenes Reveal Host Genes Linked to Phage Adsorption. Applied and Environmental Microbiology. 81: 4295-305. PMID 25888172 DOI: 10.1128/Aem.00087-15 |
0.115 |
|
| 2022 |
Griswold T, Kapsak C, Chen JC, den Bakker HC, Williams G, Kelley A, Vidyaprakash E, Katz LS. SneakerNet: A modular quality assurance and quality check workflow for primary genomic and metagenomic read data. Journal of Open Source Software. 6. PMID 35360664 DOI: 10.21105/joss.02334 |
0.113 |
|
| 2013 |
Lin C, den Bakker HC, Suzuki H, Lefébure T, Ponnala L, Sun Q, Stanhope MJ, Wiedmann M, Duhamel GE. Complete Genome Sequence of the Porcine Strain Brachyspira pilosicoli P43/6/78(T.). Genome Announcements. 1. PMID 23469345 DOI: 10.1128/Genomea.00215-12 |
0.113 |
|
| 2018 |
Ayala DI, Cook PW, Campos DL, Franco JG, Brashears MM, den Bakker H, Nightingale KK. Draft Genome Sequence of Enterococcus faecium Strain J19, Isolated from Cabbage. Genome Announcements. 6. PMID 29622613 DOI: 10.1128/Genomea.00213-18 |
0.106 |
|
| 2021 |
Den Bakker M, den Bakker HC, Diez-Gonzalez F. Heat Inactivation of Listeria monocytogenes on Pecans, Macadamia Nuts, and Sunflower Seeds. Microbiology Spectrum. 9: e0113421. PMID 34643447 DOI: 10.1128/Spectrum.01134-21 |
0.103 |
|
| 2019 |
Bugarel M, Cook PW, den Bakker HC, Harhay D, Nightingale KK, Loneragan GH. Complete Genome Sequences of Four Salmonella enterica Strains (Including Those of Serotypes Montevideo, Mbandaka, and Lubbock) Isolated from Peripheral Lymph Nodes of Healthy Cattle. Microbiology Resource Announcements. 8. PMID 30643887 DOI: 10.1128/MRA.01450-18 |
0.099 |
|
| 2014 |
den Bakker HC, Warchocki S, Wright EM, Allred AF, Ahlstrom C, Manuel CS, Stasiewicz MJ, Burrell A, Roof S, Strawn LK, Fortes E, Nightingale KK, Kephart D, Wiedmann M. Listeria floridensis sp. nov., Listeria aquatica sp. nov., Listeria cornellensis sp. nov., Listeria riparia sp. nov. and Listeria grandensis sp. nov., from agricultural and natural environments. International Journal of Systematic and Evolutionary Microbiology. 64: 1882-9. PMID 24599893 DOI: 10.1099/Ijs.0.052720-0 |
0.095 |
|
| 2015 |
Ison SA, Delannoy S, Bugarel M, Nagaraja TG, Renter DG, den Bakker HC, Nightingale KK, Fach P, Loneragan GH. Targeted Amplicon Sequencing for Single-Nucleotide-Polymorphism Genotyping of Attaching and Effacing Escherichia coli O26:H11 Cattle Strains via a High-Throughput Library Preparation Technique. Applied and Environmental Microbiology. 82: 640-9. PMID 26567298 DOI: 10.1128/Aem.03182-15 |
0.095 |
|
| 2022 |
Katz LS, Griswold T, Morrison SS, Caravas JA, Zhang S, den Bakker HC, Deng X, Carleton HA. Mashtree: a rapid comparison of whole genome sequence files. Journal of Open Source Software. 4. PMID 35978566 DOI: 10.21105/joss.01762 |
0.095 |
|
| 2017 |
Ayala DI, Cook PW, Campos DL, Brashears MM, den Bakker H, Nightingale KK. Draft Genome Sequence of Lactobacillus salivarius L28 Isolated from Ground Beef. Genome Announcements. 5. PMID 28963206 DOI: 10.1128/Genomea.00955-17 |
0.093 |
|
| 2016 |
Webb HE, Granier SA, Marault M, Millemann Y, den Bakker HC, Nightingale KK, Bugarel M, Ison SA, Scott HM, Loneragan GH. Dissemination of the mcr-1 colistin resistance gene. The Lancet. Infectious Diseases. 16: 144-5. PMID 26711363 DOI: 10.1016/S1473-3099(15)00538-1 |
0.092 |
|
| 2023 |
Gędas A, Draszanowska A, den Bakker H, Diez-Gonzalez F, Simões M, Olszewska MA. Prevention of surface colonization and anti-biofilm effect of selected phytochemicals against Listeria innocua strain. Colloids and Surfaces. B, Biointerfaces. 228: 113391. PMID 37290199 DOI: 10.1016/j.colsurfb.2023.113391 |
0.087 |
|
| 2016 |
Elder JR, Bugarel M, den Bakker HC, Loneragan GH, Nightingale KK. Interrogation of single nucleotide polymorphisms in gnd provides a novel method for molecular serogrouping of clinically important Shiga toxin producing Escherichia coli (STEC) targeted by regulation in the United States, including the "big six" non-O157 STEC and STEC O157. Journal of Microbiological Methods. 129: 85-93. PMID 27432340 DOI: 10.1016/J.Mimet.2016.07.005 |
0.059 |
|
| 2016 |
Elder JR, Bugarel M, den Bakker HC, Loneragan GH, Nightingale KK. Interrogation of single nucleotide polymorphisms in gnd provides a novel method for molecular serogrouping of clinically important Shiga toxin producing Escherichia coli (STEC) targeted by regulation in the United States, including the “big six” non-O157 STEC and STEC O157 Journal of Microbiological Methods. 129: 85-93. DOI: 10.1016/j.mimet.2016.07.005 |
0.059 |
|
| Hide low-probability matches. |
