Year |
Citation |
Score |
2023 |
Chen J, Tan C, Zhu M, Zhang C, Wang Z, Ni X, Liu Y, Wei T, Wei X, Fang X, Xu Y, Huang X, Qiu J, Liu H. CropGS-Hub: a comprehensive database of genotype and phenotype resources for genomic prediction in major crops. Nucleic Acids Research. PMID 38000385 DOI: 10.1093/nar/gkad1062 |
0.349 |
|
2023 |
Feng Y, Comes HP, Chen J, Zhu S, Lu R, Zhang X, Li P, Qiu J, Olsen KM, Qiu Y. Genome sequences and population genomics provide insights into the demographic history, inbreeding, and mutation load of two 'living fossil' tree species of Dipteronia. The Plant Journal : For Cell and Molecular Biology. PMID 37797086 DOI: 10.1111/tpj.16486 |
0.562 |
|
2023 |
Sultana MH, Alamin M, Qiu J, Fan L, Ye C. Transcriptomic profiling reveals candidate allelopathic genes in rice responsible for interactions with barnyardgrass. Frontiers in Plant Science. 14: 1104951. PMID 36875579 DOI: 10.3389/fpls.2023.1104951 |
0.609 |
|
2022 |
Zhu M, Cheng Y, Wu S, Huang X, Qiu J. Deleterious mutations are characterized by higher genomic heterozygosity than other genic variants in plant genomes. Genomics. 114: 110290. PMID 35124173 DOI: 10.1016/j.ygeno.2022.110290 |
0.312 |
|
2022 |
Wu D, Shen E, Jiang B, Feng Y, Tang W, Lao S, Jia L, Lin HY, Xie L, Weng X, Dong C, Qian Q, Lin F, Xu H, Lu H, ... ... Qiu J, et al. Genomic insights into the evolution of Echinochloa species as weed and orphan crop. Nature Communications. 13: 689. PMID 35115514 DOI: 10.1038/s41467-022-28359-9 |
0.741 |
|
2022 |
Wu D, Qiu J, Sun J, Song BK, Olsen KM, Fan L. Weedy rice, a hidden gold mine in the paddy field. Molecular Plant. PMID 35032686 DOI: 10.1016/j.molp.2022.01.008 |
0.614 |
|
2022 |
Yan N, Yang T, Yu XT, Shang LG, Guo DP, Zhang Y, Meng L, Qi QQ, Li YL, Du YM, Liu XM, Yuan XL, Qin P, Qiu J, Qian Q, et al. Chromosome-level genome assembly of Zizania latifolia provides insights into its seed shattering and phytocassane biosynthesis. Communications Biology. 5: 36. PMID 35017643 DOI: 10.1038/s42003-021-02993-3 |
0.437 |
|
2021 |
Sun Y, Shen E, Hu Y, Wu D, Feng Y, Lao S, Dong C, Du T, Hua W, Ye CY, Zhu J, Zhu QH, Cai D, Skuza L, Qiu J, et al. Population genomic analysis reveals domestication of cultivated rye from weedy rye. Molecular Plant. PMID 34971791 DOI: 10.1016/j.molp.2021.12.015 |
0.692 |
|
2021 |
Chen R, Deng Y, Ding Y, Guo J, Qiu J, Wang B, Wang C, Xie Y, Zhang Z, Chen J, Chen L, Chu C, He G, He Z, Huang X, et al. Rice functional genomics: decades' efforts and roads ahead. Science China. Life Sciences. PMID 34881420 DOI: 10.1007/s11427-021-2024-0 |
0.401 |
|
2021 |
Wei X, Qiu J, Yong K, Fan J, Zhang Q, Hua H, Liu J, Wang Q, Olsen KM, Han B, Huang X. A quantitative genomics map of rice provides genetic insights and guides breeding. Nature Genetics. PMID 33526925 DOI: 10.1038/s41588-020-00769-9 |
0.613 |
|
2021 |
Chen M, Fan W, Ji F, Hua H, Liu J, Yan M, Ma Q, Fan J, Wang Q, Zhang S, Liu G, Sun Z, Tian C, Zhao F, Zheng J, ... ... Qiu J, et al. Genome-wide Identification of Agronomically Important Genes in Outcrossing Crops using OutcrossSeq. Molecular Plant. PMID 33429094 DOI: 10.1016/j.molp.2021.01.003 |
0.404 |
|
2020 |
Ye CY, Wu D, Mao L, Jia L, Qiu J, Lao S, Chen M, Jiang B, Tang W, Peng Q, Pan L, Wang L, Feng X, Guo L, Zhang C, et al. The genomes of the allohexaploid Echinochloa crus-galli and its progenitors provide insights into polyploidization-driven adaptation. Molecular Plant. PMID 32622997 DOI: 10.1016/J.Molp.2020.07.001 |
0.73 |
|
2020 |
Lv Q, Qiu J, Liu J, Li Z, Zhang W, Wang Q, Fang J, Pan J, Chen Z, Cheng W, Barker MS, Huang X, Wei X, Cheng K. The Chimonanthus salicifolius genome provides insight into magnoliids evolution and flavonoids biosynthesis. The Plant Journal : For Cell and Molecular Biology. PMID 32524692 DOI: 10.1111/Tpj.14874 |
0.515 |
|
2020 |
Mao L, Kawaide H, Higuchi T, Chen M, Miyamoto K, Hirata Y, Kimura H, Miyazaki S, Teruya M, Fujiwara K, Tomita K, Yamane H, Hayashi KI, Nojiri H, Jia L, ... Qiu J, et al. Genomic evidence for convergent evolution of gene clusters for momilactone biosynthesis in land plants. Proceedings of the National Academy of Sciences of the United States of America. PMID 32409606 DOI: 10.1073/Pnas.1914373117 |
0.686 |
|
2020 |
Qiu J, Jia L, Wu D, Weng X, Chen L, Sun J, Chen M, Mao L, Jiang B, Ye C, Turra GM, Guo L, Ye G, Zhu QH, Imaizumi T, et al. Diverse genetic mechanisms underlie worldwide convergent rice feralization. Genome Biology. 21: 70. PMID 32213201 DOI: 10.1186/S13059-020-01980-X |
0.703 |
|
2020 |
Zhang W, Liu J, Zhang Y, Qiu J, Li Y, Zheng B, Hu F, Dai S, Huang X. A high-quality genome sequence of alkaligrass provides insights into halophyte stress tolerance. Science China. Life Sciences. PMID 32180108 DOI: 10.1007/S11427-020-1662-X |
0.489 |
|
2019 |
Mao L, Chen M, Chu Q, Jia L, Sultana MH, Wu D, Kong X, Qiu J, Ye CY, Zhu QH, Chen X, Fan L. RiceRelativesGD: a genomic database of rice relatives for rice research. Database : the Journal of Biological Databases and Curation. 2019. PMID 31560050 DOI: 10.1093/database/baz110 |
0.671 |
|
2019 |
Ye CY, Tang W, Wu D, Jia L, Qiu J, Chen M, Mao L, Lin F, Xu H, Yu X, Lu Y, Wang Y, Olsen KM, Timko MP, Fan L. Genomic evidence of human selection on Vavilovian mimicry. Nature Ecology & Evolution. PMID 31527731 DOI: 10.1038/S41559-019-0976-1 |
0.736 |
|
2019 |
Chen X, Liu F, Liu L, Qiu J, Fang D, Wang W, Zhang X, Ye C, Timko MP, Zhu QH, Fan L, Xiao B. Characterization and evolution of gene clusters for terpenoid phytoalexin biosynthesis in tobacco. Planta. PMID 31414203 DOI: 10.1007/S00425-019-03255-7 |
0.618 |
|
2019 |
Sultana MH, Liu F, Alamin M, Mao L, Jia L, Chen H, Wu D, Wang Y, Fu F, Wu S, Wang W, Ye C, Zhu QH, Qiu J, Fan L. Gene Modules Co-regulated with Biosynthetic Gene Clusters for Allelopathy between Rice and Barnyardgrass. International Journal of Molecular Sciences. 20. PMID 31394718 DOI: 10.3390/ijms20163846 |
0.588 |
|
2019 |
Wu S, Qiu J, Gao Q. QTL-BSA: A Bulked Segregant Analysis and Visualization Pipeline for QTL-seq. Interdisciplinary Sciences, Computational Life Sciences. PMID 31388943 DOI: 10.1007/s12539-019-00344-9 |
0.343 |
|
2019 |
Zou J, Mao L, Qiu J, Wang M, Jia L, Wu D, He Z, Chen M, Shen Y, Shen E, Huang Y, Li R, Hu D, Shi L, Wang K, et al. Genome-wide selection footprints and deleterious variations in young Asian allotetraploid rapeseed. Plant Biotechnology Journal. PMID 30947395 DOI: 10.1111/pbi.13115 |
0.665 |
|
2018 |
Xia H, Luo Z, Xiong J, Ma X, Lou Q, Wei H, Qiu J, Yang H, Liu G, Fan L, Chen L, Luo L. Bi-directional selection in upland rice leads to its adaptive differentiation from lowland rice on drought resistance and productivity. Molecular Plant. PMID 30584948 DOI: 10.1016/j.molp.2018.12.011 |
0.59 |
|
2018 |
Guo L, Qiu J, Li LF, Lu B, Olsen K, Fan L. Genomic Clues for Crop-Weed Interactions and Evolution. Trends in Plant Science. PMID 30293809 DOI: 10.1016/J.Tplants.2018.09.009 |
0.704 |
|
2018 |
Jia HM, Jia HJ, Cai QL, Wang Y, Zhao HB, Yang WF, Wang GY, Li YH, Zhan DL, Shen YT, Niu QF, Chang L, Qiu J, Zhao L, Xie HB, et al. The red bayberry genome and genetic basis of sex determination. Plant Biotechnology Journal. PMID 29992702 DOI: 10.1111/pbi.12985 |
0.608 |
|
2017 |
Guo L, Qiu J, Ye C, Jin G, Mao L, Zhang H, Yang X, Peng Q, Wang Y, Jia L, Lin Z, Li G, Fu F, Liu C, Chen L, et al. Echinochloa crus-galli genome analysis provides insight into its adaptation and invasiveness as a weed. Nature Communications. 8: 1031. PMID 29044108 DOI: 10.1038/S41467-017-01067-5 |
0.666 |
|
2017 |
Qiu J, Zhou Y, Mao L, Ye C, Wang W, Zhang J, Yu Y, Fu F, Wang Y, Qian F, Qi T, Wu S, Sultana MH, Cao YN, Wang Y, et al. Genomic variation associated with local adaptation of weedy rice during de-domestication. Nature Communications. 8: 15323. PMID 28537247 DOI: 10.1038/Ncomms15323 |
0.677 |
|
2017 |
Sun YH, Hung CY, Qiu J, Chen J, Kittur FS, Oldham CE, Henny RJ, Burkey KO, Fan L, Xie J. Accumulation of high OPDA level correlates with reduced ROS and elevated GSH benefiting white cell survival in variegated leaves. Scientific Reports. 7: 44158. PMID 28276518 DOI: 10.1038/Srep44158 |
0.561 |
|
2016 |
Hung CY, Qiu J, Sun YH, Chen J, Kittur FS, Henny RJ, Jin G, Fan L, Xie J. Gibberellin deficiency is responsible for shy-flowering nature of Epipremnum aureum. Scientific Reports. 6: 28598. PMID 27345283 DOI: 10.1038/Srep28598 |
0.565 |
|
2015 |
Shen E, Zou J, Hubertus Behrens F, Chen L, Ye C, Dai S, Li R, Ni M, Jiang X, Qiu J, Liu Y, Wang W, Zhu QH, Chalhoub B, Bancroft I, et al. Identification, evolution, and expression partitioning of miRNAs in allopolyploid Brassica napus. Journal of Experimental Botany. PMID 26357884 DOI: 10.1093/jxb/erv420 |
0.585 |
|
2015 |
Li F, Wang W, Zhao N, Xiao B, Cao P, Wu X, Ye C, Shen E, Qiu J, Zhu QH, Xie J, Zhou X, Fan L. Regulation of Nicotine Biosynthesis by an Endogenous Target Mimicry of miRNA in Tobacco. Plant Physiology. PMID 26246450 DOI: 10.1104/pp.15.00649 |
0.556 |
|
2015 |
Guo L, Qiu J, Han Z, Ye Z, Chen C, Liu C, Xin X, Ye CY, Wang YY, Xie H, Wang Y, Bao J, Tang S, Xu J, Gui Y, et al. A host plant genome (Zizania latifolia) after a century-long endophyte infection. The Plant Journal : For Cell and Molecular Biology. PMID 26072920 DOI: 10.1111/Tpj.12912 |
0.63 |
|
2014 |
Ye CY, Xu H, Shen E, Liu Y, Wang Y, Shen Y, Qiu J, Zhu QH, Fan L. Genome-wide identification of non-coding RNAs interacted with microRNAs in soybean. Frontiers in Plant Science. 5: 743. PMID 25566308 DOI: 10.3389/fpls.2014.00743 |
0.563 |
|
2014 |
Ye CY, Lin Z, Li G, Wang YY, Qiu J, Fu F, Zhang H, Chen L, Ye S, Song W, Jin G, Zhu J, Lu Y, Guo L, Fan L. Echinochloa chloroplast genomes: insights into the evolution and taxonomic identification of two weedy species. Plos One. 9: e113657. PMID 25427255 DOI: 10.1371/journal.pone.0113657 |
0.664 |
|
2014 |
Qiu J, Wang Y, Wu S, Wang YY, Ye CY, Bai X, Li Z, Yan C, Wang W, Wang Z, Shu Q, Xie J, Lee SH, Fan L. Genome re-sequencing of semi-wild soybean reveals a complex Soja population structure and deep introgression. Plos One. 9: e108479. PMID 25265539 DOI: 10.1371/journal.pone.0108479 |
0.58 |
|
2014 |
Qiu J, Zhu J, Fu F, Ye CY, Wang W, Mao L, Lin Z, Chen L, Zhang H, Guo L, Qiang S, Lu Y, Fan L. Genome re-sequencing suggested a weedy rice origin from domesticated indica-japonica hybridization: a case study from southern China. Planta. 240: 1353-63. PMID 25187076 DOI: 10.1007/s00425-014-2159-2 |
0.671 |
|
2013 |
Hung CY, Fan L, Kittur FS, Sun K, Qiu J, Tang S, Holliday BM, Xiao B, Burkey KO, Bush LP, Conkling MA, Roje S, Xie J. Alteration of the alkaloid profile in genetically modified tobacco reveals a role of methylenetetrahydrofolate reductase in nicotine N-demethylation. Plant Physiology. 161: 1049-60. PMID 23221678 DOI: 10.1104/Pp.112.209247 |
0.53 |
|
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