| Year |
Citation |
Score |
| 2023 |
Xu C, Xu Y, Wang Z, Zhang X, Wu Y, Lu X, Sun H, Wang L, Zhang Q, Zhang Q, Li X, Xiao J, Li X, Zhao M, Ouyang Y, et al. Spontaneous movement of a retrotransposon generated genic dominant male sterility providing a useful tool for rice breeding. National Science Review. 10: nwad210. PMID 37621414 DOI: 10.1093/nsr/nwad210 |
0.617 |
|
| 2023 |
Yu Z, Chen Y, Zhou Y, Zhang Y, Li M, Ouyang Y, Chebotarov D, Mauleon R, Zhao H, Xie W, McNally KL, Wing RA, Guo W, Zhang J. Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice. Molecular Plant. PMID 36966359 DOI: 10.1016/j.molp.2023.03.012 |
0.33 |
|
| 2023 |
Zhang H, Yu F, Xie P, Sun S, Qiao X, Tang S, Chen C, Yang S, Mei C, Yang D, Wu Y, Xia R, Li X, Lu J, Liu Y, ... ... Ouyang Y, et al. A Gγ protein regulates alkaline sensitivity in crops. Science (New York, N.Y.). 379: eade8416. PMID 36952416 DOI: 10.1126/science.ade8416 |
0.559 |
|
| 2023 |
Zhou P, Wang Z, Zhu X, Tang Y, Ye L, Yu H, Li Y, Zhang N, Liu T, Wang T, Wu Y, Cao D, Chen Y, Li X, Zhang Q, ... ... Ouyang Y, et al. A minimal genome design to maximally guarantee fertile inter-subspecific hybrid rice. Molecular Plant. PMID 36843324 DOI: 10.1016/j.molp.2023.02.009 |
0.751 |
|
| 2022 |
Jiang H, Lu Q, Qiu S, Yu H, Wang Z, Yu Z, Lu Y, Wang L, Xia F, Wu Y, Li F, Zhang Q, Liu G, Song D, Ma C, ... ... Ouyang Y, et al. Fujian cytoplasmic male sterility and the fertility restorer gene provide a promising breeding system for hybrid rice. Proceedings of the National Academy of Sciences of the United States of America. 119: e2208759119. PMID 35969741 DOI: 10.1073/pnas.2208759119 |
0.614 |
|
| 2022 |
Wang X, Zhou T, Li G, Yao W, Hu W, Wei X, Che J, Yang H, Shao L, Hua J, Li X, Xiao J, Xing Y, Ouyang Y, Zhang Q. A Ghd7-centered regulatory network provides a mechanistic approximation to the optimal heterosis in an elite rice hybrid. The Plant Journal : For Cell and Molecular Biology. PMID 35912411 DOI: 10.1111/tpj.15928 |
0.696 |
|
| 2022 |
Huang F, Jiang Y, Chen T, Li H, Fu M, Wang Y, Xu Y, Li Y, Zhou Z, Jia L, Ouyang Y, Yao W. New Data and New Features of the FunRiceGenes (Functionally Characterized Rice Genes) Database: 2021 Update. Rice (New York, N.Y.). 15: 23. PMID 35438356 DOI: 10.1186/s12284-022-00569-1 |
0.358 |
|
| 2022 |
Ouyang Y, Li X, Zhang Q. Understanding the genetic and molecular constitutions of heterosis for developing hybrid rice. Journal of Genetics and Genomics = Yi Chuan Xue Bao. PMID 35276387 DOI: 10.1016/j.jgg.2022.02.022 |
0.624 |
|
| 2021 |
Huang Y, Chen J, Dong C, Sosa D, Xia S, Ouyang Y, Fan C, Li D, Mortola E, Long M, Bergelson J. Species-specific partial gene duplication in Arabidopsis thaliana evolved novel phenotypic effects on morphological traits under strong positive selection. The Plant Cell. PMID 34875081 DOI: 10.1093/plcell/koab291 |
0.599 |
|
| 2021 |
Yang W, Wu K, Wang B, Liu H, Guo S, Guo X, Luo W, Sun S, Ouyang Y, Fu X, Chong K, Zhang Q, Xu Y. The RING E3 ligase CLG1 targets GS3 for degradation via the endosome pathway to determine grain size in rice. Molecular Plant. PMID 34216830 DOI: 10.1016/j.molp.2021.06.027 |
0.472 |
|
| 2021 |
Wang L, Ming L, Liao K, Xia C, Sun S, Chang Y, Wang H, Fu D, Xu C, Wang Z, Li X, Xie W, Ouyang Y, Zhang Q, Li X, et al. Bract suppression regulated by the miR156/529-SPLs-NL1-PLA1 module is required for the transition from vegetative to reproductive branching in rice. Molecular Plant. PMID 33933648 DOI: 10.1016/j.molp.2021.04.013 |
0.563 |
|
| 2020 |
Xia F, Ouyang Y. Recurrent breakdown and rebalance of segregation distortion in the genomes: battle for the transmission advantage. Abiotech. 1: 246-254. PMID 36304131 DOI: 10.1007/s42994-020-00023-0 |
0.381 |
|
| 2020 |
Zhang B, Zhang H, Li F, Ouyang Y, Yuan M, Li X, Xiao J, Wang S. Multiple Alleles Encoding Atypical NLRs with Unique Central Tandem Repeats in Rice Confer Resistance to pv. . Plant Communications. 1: 100088. PMID 33367251 DOI: 10.1016/j.xplc.2020.100088 |
0.318 |
|
| 2020 |
Mi J, Li G, Xu C, Yang J, Yu H, Wang G, Li X, Xiao J, Song H, Zhang Q, Ouyang Y. Artificial selection in domestication and breeding prevents speciation in rice. Molecular Plant. PMID 31962168 DOI: 10.1016/J.Molp.2020.01.005 |
0.668 |
|
| 2020 |
Lu J, Hou J, Ouyang Y, Luo H, Zhao J, Mao C, Han M, Wang L, Xiao J, Yang Y, Li X. A direct PCR–based SNP marker–assisted selection system (D-MAS) for different crops Molecular Breeding. 40. DOI: 10.1007/S11032-019-1091-3 |
0.347 |
|
| 2019 |
Ouyang Y. Understanding and breaking down the reproductive barrier between Asian and African cultivated rice: a new start for hybrid rice breeding. Science China. Life Sciences. 62: 1114-1116. PMID 31297692 DOI: 10.1007/S11427-019-9592-6 |
0.415 |
|
| 2019 |
Li G, Jin J, Zhou Y, Bai X, Mao D, Tan C, Wang G, Ouyang Y. Genome-wide dissection of segregation distortion using multiple inter-subspecific crosses in rice. Science China. Life Sciences. PMID 30863959 DOI: 10.1007/S11427-018-9452-8 |
0.472 |
|
| 2019 |
Zhang L, Ren Y, Yang T, Li G, Chen J, Gschwend AR, Yu Y, Hou G, Zi J, Zhou R, Wen B, Zhang J, Chougule K, Wang M, Copetti D, ... ... Ouyang Y, et al. Rapid evolution of protein diversity by de novo origination in Oryza. Nature Ecology & Evolution. PMID 30858588 DOI: 10.1038/S41559-019-0822-5 |
0.611 |
|
| 2019 |
Shao L, Xing F, Xu C, Zhang Q, Che J, Wang X, Song J, Li X, Xiao J, Chen LL, Ouyang Y, Zhang Q. Patterns of genome-wide allele-specific expression in hybrid rice and the implications on the genetic basis of heterosis. Proceedings of the National Academy of Sciences of the United States of America. PMID 30833384 DOI: 10.1073/Pnas.1820513116 |
0.65 |
|
| 2019 |
Mi J, Lei Y, Kim S, Prahalada GD, Ouyang Y, Mou T. An effective strategy for fertility improvement of indica-japonica hybrid rice by pyramiding S5-n, f5-n, and pf12-j Molecular Breeding. 39. DOI: 10.1007/S11032-019-1044-X |
0.334 |
|
| 2018 |
Ouyang Y, Zhang Q. The molecular and evolutionary basis of reproductive isolation in plants. Journal of Genetics and Genomics = Yi Chuan Xue Bao. 45: 613-620. PMID 30459118 DOI: 10.1016/J.Jgg.2018.10.004 |
0.658 |
|
| 2018 |
Sun S, Wang L, Mao H, Shao L, Li X, Xiao J, Ouyang Y, Zhang Q. A G-protein pathway determines grain size in rice. Nature Communications. 9: 851. PMID 29487318 DOI: 10.1038/S41467-018-03141-Y |
0.528 |
|
| 2018 |
Mi J, Yang D, Chen Y, Jiang J, Mou H, Huang J, Ouyang Y, Mou T. Accelerated molecular breeding of a novel P/TGMS line with broad-spectrum resistance to rice blast and bacterial blight in two-line hybrid rice. Rice (New York, N.Y.). 11: 11. PMID 29455311 DOI: 10.1186/S12284-018-0203-8 |
0.34 |
|
| 2018 |
Guo J, Xu C, Wu D, Zhao Y, Qiu Y, Wang X, Ouyang Y, Cai B, Liu X, Jing S, Shangguan X, Wang H, Ma Y, Hu L, Wu Y, et al. Bph6 encodes an exocyst-localized protein and confers broad resistance to planthoppers in rice. Nature Genetics. PMID 29358653 DOI: 10.1038/S41588-018-0039-6 |
0.423 |
|
| 2017 |
Yao W, Li G, Yu Y, Ouyang Y. funRiceGenes dataset for comprehensive understanding and application of rice functional genes. Gigascience. PMID 29220485 DOI: 10.1093/Gigascience/Gix119 |
0.475 |
|
| 2017 |
Li G, Li X, Wang Y, Mi J, Xing F, Zhang D, Dong Q, Li X, Xiao J, Zhang Q, Ouyang Y. Three representative inter and intra-subspecific crosses reveal the genetic architecture of reproductive isolation in rice. The Plant Journal : For Cell and Molecular Biology. PMID 28805257 DOI: 10.1111/Tpj.13661 |
0.632 |
|
| 2017 |
Chen M, Xie S, Ouyang Y, Yao J. Rice PcG gene OsEMF2b controls seed dormancy and seedling growth by regulating the expression of OsVP1. Plant Science : An International Journal of Experimental Plant Biology. 260: 80-89. PMID 28554479 DOI: 10.1016/J.Plantsci.2017.04.005 |
0.403 |
|
| 2017 |
Zhu Y, Yu Y, Cheng K, Ouyang Y, Wang J, Gong L, Zhang Q, Li X, Xiao J, Zhang Q. Reproductive barriers in indica-japonica rice hybrids are uncovered by transcriptome analysis. Plant Physiology. PMID 28483876 DOI: 10.1104/Pp.17.00093 |
0.654 |
|
| 2016 |
Zhao Y, Huang J, Wang Z, Jing S, Wang Y, Ouyang Y, Cai B, Xin XF, Liu X, Zhang C, Pan Y, Ma R, Li Q, Jiang W, Zeng Y, et al. Allelic diversity in an NLR gene BPH9 enables rice to combat planthopper variation. Proceedings of the National Academy of Sciences of the United States of America. PMID 27791169 DOI: 10.1073/Pnas.1614862113 |
0.659 |
|
| 2016 |
Zhou W, Wang X, Zhou D, Ouyang Y, Yao J. Overexpression of the 16-kDa α-amylase/trypsin inhibitor RAG2 improves grain yield and quality in rice. Plant Biotechnology Journal. PMID 27775871 DOI: 10.1111/Pbi.12654 |
0.332 |
|
| 2016 |
Zhang J, Chen LL, Xing F, Kudrna DA, Yao W, Copetti D, Mu T, Li W, Song JM, Xie W, Lee S, Talag J, Shao L, An Y, Zhang CL, ... Ouyang Y, et al. Extensive sequence divergence between the reference genomes of two elite indica rice varieties Zhenshan 97 and Minghui 63. Proceedings of the National Academy of Sciences of the United States of America. PMID 27535938 DOI: 10.1073/Pnas.1611012113 |
0.752 |
|
| 2016 |
Ouyang Y, Li G, Mi J, Xu C, Du H, Zhang C, Xie W, Li X, Xiao J, Song H, Zhang Q. Origination and establishment of a trigenic reproductive isolation system in rice. Molecular Plant. PMID 27477681 DOI: 10.1016/J.Molp.2016.07.008 |
0.587 |
|
| 2016 |
Huang X, Lu Z, Wang X, Ouyang Y, Chen W, Xie K, Wang D, Luo M, Luo J, Yao J. Imprinted Gene OsFIE1 Modulates Rice Seed Development by Influencing the Nutrient Metabolism and Modifying Genome H3K27me3. The Plant Journal : For Cell and Molecular Biology. PMID 27133784 DOI: 10.1111/Tpj.13202 |
0.48 |
|
| 2016 |
OUYANG Y. Progress of <italic>indica-japonica</italic> hybrid sterility and wide-compatibility in rice Chinese Science Bulletin. 61: 3833-3841. DOI: 10.1360/N972016-01012 |
0.537 |
|
| 2016 |
Chu C, Lu Z, Wang X, Yang W, Liu Y, Jiao J, Ouyang Y, Yao J. OsSET7, a homologue of ARABIDOPSIS TRITHORAX-RELATED protein that plays a role in grain elongation regulation in rice Agri Gene. 1: 135-142. DOI: 10.1016/J.Aggene.2016.08.005 |
0.436 |
|
| 2015 |
Mi J, Li G, Huang J, Yu H, Zhou F, Zhang Q, Ouyang Y, Mou T. Stacking S5-n and f5-n to overcome sterility in indica-japonica hybrid rice. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 26704419 DOI: 10.1007/S00122-015-2648-0 |
0.557 |
|
| 2015 |
Wang X, Zhou W, Lu Z, Ouyang Y, O CS, Yao J. A lipid transfer protein, OsLTPL36, is essential for seed development and seed quality in rice. Plant Science : An International Journal of Experimental Plant Biology. 239: 200-208. PMID 26398804 DOI: 10.1016/J.Plantsci.2015.07.016 |
0.389 |
|
| 2015 |
Ma K, Zhang D, Liu Y, Ouyang Y, Li J, Hu C, Yao J. Ectopic expression of EbFIE from apomictic Eulaliopsis binata in rice results in pleiotropic phenotypes likely due to interaction with OsCLF. Plant Science : An International Journal of Experimental Plant Biology. 234: 86-96. PMID 25804812 DOI: 10.1016/J.Plantsci.2015.02.003 |
0.422 |
|
| 2015 |
Ling S, Chen C, Wang Y, Sun X, Lu Z, Ouyang Y, Yao J. The mature anther-preferentially expressed genes are associated with pollen fertility, pollen germination and anther dehiscence in rice. Bmc Genomics. 16: 101. PMID 25765586 DOI: 10.1186/S12864-015-1305-Y |
0.506 |
|
| 2015 |
Zhao H, Yao W, Ouyang Y, Yang W, Wang G, Lian X, Xing Y, Chen L, Xie W. RiceVarMap: a comprehensive database of rice genomic variations. Nucleic Acids Research. 43: D1018-22. PMID 25274737 DOI: 10.1093/Nar/Gku894 |
0.626 |
|
| 2015 |
Xiao J, Wu C, Yuan M, Wang N, Fan Y, Yang M, Ouyang Y, Ruan Y, Zhang Q. The progress and perspective of rice functional genomics research in China Chinese Science Bulletin. 60: 1711-1722. DOI: 10.1360/N972015-00391 |
0.771 |
|
| 2014 |
Sun X, Ling S, Lu Z, Ouyang YD, Liu S, Yao J. OsNF-YB1, a rice endosperm-specific gene, is essential for cell proliferation in endosperm development. Gene. 551: 214-21. PMID 25178525 DOI: 10.1016/J.Gene.2014.08.059 |
0.443 |
|
| 2014 |
Zhang C, Gschwend AR, Ouyang Y, Long M. Evolution of gene structural complexity: an alternative-splicing-based model accounts for intron-containing retrogenes. Plant Physiology. 165: 412-23. PMID 24520158 DOI: 10.1104/Pp.113.231696 |
0.61 |
|
| 2014 |
Ye Y, She Q, Ma K, Liu Y, Ouyang Y, Hu C, Yao J. Polycomb Group Gene EbEZ from Apomictic Eulaliopsis binata Ectopic Expressed in Rice and Regulate Seed Development by Interacting with the OsFIE1 Protein Plant Molecular Biology Reporter. 33: 1314-1326. DOI: 10.1007/S11105-014-0831-0 |
0.455 |
|
| 2014 |
Xie S, Chen M, Pei R, Ouyang Y, Yao J. OsEMF2b Acts as a Regulator of Flowering Transition and Floral Organ Identity by Mediating H3K27me3 Deposition at OsLFL1 and OsMADS4 in Rice Plant Molecular Biology Reporter. DOI: 10.1007/S11105-014-0733-1 |
0.462 |
|
| 2013 |
Nie DM, Ouyang YD, Wang X, Zhou W, Hu CG, Yao J. Genome-wide analysis of endosperm-specific genes in rice. Gene. 530: 236-47. PMID 23948082 DOI: 10.1016/J.Gene.2013.07.088 |
0.511 |
|
| 2013 |
Huang J, Zhao X, Cheng K, Jiang Y, Ouyang Y, Xu C, Li X, Xiao J, Zhang Q. OsAP65, a rice aspartic protease, is essential for male fertility and plays a role in pollen germination and pollen tube growth. Journal of Experimental Botany. 64: 3351-60. PMID 23918968 DOI: 10.1093/Jxb/Ert173 |
0.764 |
|
| 2013 |
Yang Y, Zhong J, Ouyang Y, Yao J. The integrative expression and co-expression analysis of the AGO gene family in rice. Gene. 528: 221-235. PMID 23872535 DOI: 10.1016/J.Gene.2013.07.002 |
0.435 |
|
| 2013 |
Lu Z, Huang X, Ouyang Y, Yao J. Genome-wide identification, phylogenetic and co-expression analysis of OsSET gene family in rice. Plos One. 8: e65426. PMID 23762371 DOI: 10.1371/Journal.Pone.0065426 |
0.45 |
|
| 2013 |
Ouyang Y, Zhang Q. Understanding reproductive isolation based on the rice model Annual Review of Plant Biology. 64: 111-135. PMID 23638826 DOI: 10.1146/Annurev-Arplant-050312-120205 |
0.639 |
|
| 2012 |
Yang J, Zhao X, Cheng K, Du H, Ouyang Y, Chen J, Qiu S, Huang J, Jiang Y, Jiang L, Ding J, Wang J, Xu C, Li X, Zhang Q. A killer-protector system regulates both hybrid sterility and segregation distortion in rice. Science (New York, N.Y.). 337: 1336-40. PMID 22984070 DOI: 10.1126/Science.1223702 |
0.778 |
|
| 2012 |
Ouyang Y, Huang X, Lu Z, Yao J. Genomic survey, expression profile and co-expression network analysis of OsWD40 family in rice. Bmc Genomics. 13: 100. PMID 22429805 DOI: 10.1186/1471-2164-13-100 |
0.478 |
|
| 2012 |
Ding J, Lu Q, Ouyang Y, Mao H, Zhang P, Yao J, Xu C, Li X, Xiao J, Zhang Q. A long noncoding RNA regulates photoperiod-sensitive male sterility, an essential component of hybrid rice. Proceedings of the National Academy of Sciences of the United States of America. 109: 2654-9. PMID 22308482 DOI: 10.1073/Pnas.1121374109 |
0.631 |
|
| 2011 |
Li X, Gao X, Wei Y, Deng L, Ouyang Y, Chen G, Li X, Zhang Q, Wu C. Rice APOPTOSIS INHIBITOR5 coupled with two DEAD-box adenosine 5'-triphosphate-dependent RNA helicases regulates tapetum degeneration. The Plant Cell. 23: 1416-34. PMID 21467577 DOI: 10.1105/Tpc.110.082636 |
0.744 |
|
| 2011 |
Du H, Ouyang Y, Zhang C, Zhang Q. Complex evolution of S5, a major reproductive barrier regulator, in the cultivated rice Oryza sativa and its wild relatives. The New Phytologist. 191: 275-87. PMID 21443693 DOI: 10.1111/J.1469-8137.2011.03691.X |
0.638 |
|
| 2010 |
Ouyang Y, Liu YG, Zhang Q. Hybrid sterility in plant: stories from rice. Current Opinion in Plant Biology. 13: 186-92. PMID 20153244 DOI: 10.1016/J.Pbi.2010.01.002 |
0.692 |
|
| 2009 |
Huang J, Zhao X, Yu H, Ouyang Y, Wang L, Zhang Q. The ankyrin repeat gene family in rice: genome-wide identification, classification and expression profiling. Plant Molecular Biology. 71: 207-26. PMID 19609685 DOI: 10.1007/S11103-009-9518-6 |
0.649 |
|
| 2009 |
Chen J, Ouyang Y, Wang L, Xie W, Zhang Q. Aspartic proteases gene family in rice: Gene structure and expression, predicted protein features and phylogenetic relation. Gene. 442: 108-18. PMID 19409457 DOI: 10.1016/J.Gene.2009.04.021 |
0.652 |
|
| 2009 |
Ouyang Y, Chen J, Xie W, Wang L, Zhang Q. Comprehensive sequence and expression profile analysis of Hsp20 gene family in rice. Plant Molecular Biology. 70: 341-57. PMID 19277876 DOI: 10.1007/S11103-009-9477-Y |
0.639 |
|
| 2009 |
Ouyang Y, Chen J, Ding J, Zhang Q. Advances in the understanding of inter-subspecific hybrid sterility and wide-compatibility in rice Chinese Science Bulletin. 54: 2332-2341. DOI: 10.1007/S11434-009-0371-4 |
0.669 |
|
| 2008 |
Chen J, Ding J, Ouyang Y, Du H, Yang J, Cheng K, Zhao J, Qiu S, Zhang X, Yao J, Liu K, Wang L, Xu C, Li X, Xue Y, et al. A triallelic system of S5 is a major regulator of the reproductive barrier and compatibility of indica-japonica hybrids in rice. Proceedings of the National Academy of Sciences of the United States of America. 105: 11436-41. PMID 18678896 DOI: 10.1073/Pnas.0804761105 |
0.762 |
|
| 2004 |
Chu Z, Ouyang Y, Zhang J, Yang H, Wang S. Genome-wide analysis of defense-responsive genes in bacterial blight resistance of rice mediated by the recessive R gene xa13. Molecular Genetics and Genomics. 271: 111-120. PMID 14730444 DOI: 10.1007/S00438-003-0964-6 |
0.466 |
|
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