| Year |
Citation |
Score |
| 2015 |
Alabady MS, Rogers WL, Malmberg RL. Development of Transcriptomic Markers for Population Analysis Using Restriction Site Associated RNA Sequencing (RARseq). Plos One. 10: e0134855. PMID 26241739 DOI: 10.1371/Journal.Pone.0134855 |
0.36 |
|
| 2015 |
Ding L, Xue X, LaMarca S, Mohebbi M, Samad A, Malmberg RL, Cai L. Accurate prediction of RNA nucleotide interactions with backbone k-tree model. Bioinformatics (Oxford, England). PMID 25886978 DOI: 10.1093/Bioinformatics/Btv210 |
0.352 |
|
| 2015 |
Stephens JD, Rogers WL, Heyduk K, Cruse-Sanders JM, Determann RO, Glenn TC, Malmberg RL. Resolving phylogenetic relationships of the recently radiated carnivorous plant genus Sarracenia using target enrichment. Molecular Phylogenetics and Evolution. 85: 76-87. PMID 25689607 DOI: 10.1016/J.Ympev.2015.01.015 |
0.309 |
|
| 2015 |
Wang Y, Malmberg RL, Cai L. A Novel Structural Measure Separating Non-Coding RNAs from Genomic Backgrounds Tsinghua Science & Technology. 20: 474-483. DOI: 10.1109/Tst.2015.7297746 |
0.351 |
|
| 2013 |
Manzourolajdad A, Wang Y, Shaw TI, Malmberg RL. Information-theoretic uncertainty of SCFG-modeled folding space of the non-coding RNA. Journal of Theoretical Biology. 318: 140-63. PMID 23160142 DOI: 10.1016/J.Jtbi.2012.10.023 |
0.353 |
|
| 2012 |
Zhang D, Xue X, Malmberg RL, Cai L. TRFolder-W: a web server for telomerase RNA structure prediction in yeast genomes. Bioinformatics (Oxford, England). 28: 2696-7. PMID 22923293 DOI: 10.1093/Bioinformatics/Bts506 |
0.331 |
|
| 2012 |
Shareghi P, Wang Y, Malmberg R, Cai L. Simultaneous prediction of RNA secondary structure and helix coaxial stacking. Bmc Genomics. 13: S7. PMID 22759616 DOI: 10.1186/1471-2164-13-S3-S7 |
0.341 |
|
| 2012 |
Wang Y, Manzour A, Shareghi P, Shaw TI, Li YW, Malmberg RL, Cai L. Stable stem enabled Shannon entropies distinguish non-coding RNAs from random backgrounds. Bmc Bioinformatics. 13: S1. PMID 22537005 DOI: 10.1186/1471-2105-13-S5-S1 |
0.364 |
|
| 2011 |
Srivastava A, Cai L, Mrázek J, Malmberg RL. Mutational patterns in RNA secondary structure evolution examined in three RNA families. Plos One. 6: e20484. PMID 21698102 DOI: 10.1371/Journal.Pone.0020484 |
0.339 |
|
| 2011 |
Srivastava A, Rogers WL, Breton CM, Cai L, Malmberg RL. Transcriptome analysis of sarracenia, an insectivorous plant. Dna Research : An International Journal For Rapid Publication of Reports On Genes and Genomes. 18: 253-61. PMID 21676972 DOI: 10.1093/Dnares/Dsr014 |
0.334 |
|
| 2011 |
Shaw TI, Manzour A, Wang Y, Malmberg RL, Cai L. Analyzing modular RNA structure reveals low global structural entropy in microRNA sequence. Journal of Bioinformatics and Computational Biology. 9: 283-98. PMID 21523933 DOI: 10.1142/S0219720011005495 |
0.334 |
|
| 2011 |
Guo L, Zhang D, Wang Y, Malmberg RL, McEachern M, Cai L. TRFolder: computational prediction of novel telomerase RNA structures in yeast genomes. International Journal of Bioinformatics Research and Applications. 7: 63-81. PMID 21441097 DOI: 10.1504/Ijbra.2011.039170 |
0.354 |
|
| 2010 |
Malmberg RL, Shaw TI, Cai L. RNApasta: a tool for analysis of RNA structural alignments. International Journal of Bioinformatics Research and Applications. 6: 571-83. PMID 21354963 DOI: 10.1504/Ijbra.2010.038738 |
0.357 |
|
| 2009 |
Wang Y, Huang Z, Wu Y, Malmberg RL, Cai L. RNATOPS-W: a web server for RNA structure searches of genomes. Bioinformatics (Oxford, England). 25: 1080-1. PMID 19269988 DOI: 10.1093/Bioinformatics/Btp095 |
0.331 |
|
| 2008 |
Huang Z, Wu Y, Robertson J, Feng L, Malmberg RL, Cai L. Fast and accurate search for non-coding RNA pseudoknot structures in genomes. Bioinformatics (Oxford, England). 24: 2281-7. PMID 18687694 DOI: 10.1093/Bioinformatics/Btn393 |
0.354 |
|
| 2008 |
Zhao J, Malmberg RL, Cai L. Rapid ab initio prediction of RNA pseudoknots via graph tree decomposition. Journal of Mathematical Biology. 56: 145-59. PMID 17906862 DOI: 10.1007/S00285-007-0124-4 |
0.313 |
|
| 2006 |
Song Y, Liu C, Malmberg RL, He C, Cai L. Memory efficient alignment between RNA sequences and stochastic grammar models of pseudoknots. International Journal of Bioinformatics Research and Applications. 2: 289-304. PMID 18048167 DOI: 10.1504/Ijbra.2006.010606 |
0.302 |
|
| 2006 |
Song Y, Liu C, Huang X, Malmberg RL, Xu Y, Cai L. Efficient parameterized algorithms for biopolymer structure-sequence alignment. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 3: 423-32. PMID 17085850 DOI: 10.1109/Tcbb.2006.52 |
0.348 |
|
| 2005 |
Song YL, Zhao JZ, Liu CM, Liu K, Malmberg R, Cai LM. RNA structural homology search with a succinct stochastic grammar model Journal of Computer Science and Technology. 20: 454-464. DOI: 10.1007/S11390-005-0454-X |
0.351 |
|
| 2003 |
Cai L, Malmberg RL, Wu Y. Stochastic modeling of RNA pseudoknotted structures: a grammatical approach. Bioinformatics (Oxford, England). 19: i66-73. PMID 12855439 DOI: 10.1093/Bioinformatics/Btg1007 |
0.314 |
|
| 2002 |
Lawrence CJ, Malmberg RL, Muszynski MG, Dawe RK. Maximum likelihood methods reveal conservation of function among closely related kinesin families. Journal of Molecular Evolution. 54: 42-53. PMID 11734897 DOI: 10.1007/S00239-001-0016-Y |
0.314 |
|
| 1998 |
Galloway GL, Malmberg RL, Price RA. Phylogenetic utility of the nuclear gene arginine decarboxylase: an example from Brassicaceae. Molecular Biology and Evolution. 15: 1312-20. PMID 9787437 DOI: 10.1093/Oxfordjournals.Molbev.A025859 |
0.347 |
|
| 1998 |
Watson MB, Emory KK, Piatak RM, Malmberg RL. Arginine decarboxylase (polyamine synthesis) mutants of Arabidopsis thaliana exhibit altered root growth. The Plant Journal : For Cell and Molecular Biology. 13: 231-9. PMID 9680979 DOI: 10.1046/J.1365-313X.1998.00027.X |
0.302 |
|
| 1997 |
Kaye C, Crawford NM, Malmberg RL. Constitutive non-inducible expression of the Arabidopsis thaliana Nia 2 gene in two nitrate reductase mutants of Nicotiana plumbaginifolia. Plant Molecular Biology. 33: 953-64. PMID 9154978 DOI: 10.1023/A:1005710407155 |
0.307 |
|
| 1996 |
Malik V, Watson MB, Malmberg RL. A Tobacco Ornithine Decarboxylase Partial cDNA Clone Journal of Plant Biochemistry and Biotechnology. 5: 109-112. DOI: 10.1007/Bf03262993 |
0.311 |
|
| 1994 |
Trull MC, Malmberg RL. Puzzle box, a tobacco line with flowers that mix floral and inflorescence characteristics American Journal of Botany. 81: 582-588. DOI: 10.1002/J.1537-2197.1994.Tb15488.X |
0.324 |
|
| 1992 |
Malmberg RL, Smith KE, Bell E, Cellino ML. Arginine decarboxylase of oats is clipped from a precursor into two polypeptides found in the soluble enzyme. Plant Physiology. 100: 146-52. PMID 16652937 DOI: 10.1104/Pp.100.1.146 |
0.539 |
|
| 1992 |
Trull MC, Holaway BL, Malmberg RL. Development of stigmatoid anthers in a tobacco mutant: implications for regulation of stigma differentiation Botany. 70: 2339-2346. DOI: 10.1139/B92-293 |
0.336 |
|
| 1990 |
Bell E, Malmberg RL. Analysis of a cDNA encoding arginine decarboxylase from oat reveals similarity to the Escherichia coli arginine decarboxylase and evidence of protein processing. Molecular & General Genetics : Mgg. 224: 431-6. PMID 2266946 DOI: 10.1007/Bf00262438 |
0.557 |
|
| 1987 |
Malmberg RL, Rose DJ. Biochemical genetics of resistance to MGBG in tobacco: Mutants that alter SAM decarboxylase or polyamine ratios, and floral morphology Mgg Molecular &Amp; General Genetics. 207: 9-14. DOI: 10.1007/Bf00331484 |
0.334 |
|
| 1983 |
Malmberg RL, McIndoo J. Abnormal floral development of a tobacco mutant with elevated polyamine levels Nature. 305: 623-625. DOI: 10.1038/305623A0 |
0.3 |
|
| 1980 |
Malmberg RL. Biochemical, cellular and developmental characterization of a temperature-sensitive mutant of nicotiana tabacum and its second site revertant Cell. 22: 603-609. PMID 7192606 DOI: 10.1016/0092-8674(80)90370-0 |
0.317 |
|
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