35 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Marques DA, Jones FC, Palma FD, Kingsley DM, Reimchen TE. Genomic changes underlying repeated niche shifts in an adaptive radiation. Evolution; International Journal of Organic Evolution. PMID 35398888 DOI: 10.1111/evo.14490  0.649
2021 Roberts Kingman GA, Lee D, Jones FC, Desmet D, Bell MA, Kingsley DM. Longer or shorter spines: Reciprocal trait evolution in stickleback via triallelic regulatory changes in . Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34321354 DOI: 10.1073/pnas.2100694118  0.665
2021 Roberts Kingman GA, Vyas DN, Jones FC, Brady SD, Chen HI, Reid K, Milhaven M, Bertino TS, Aguirre WE, Heins DC, von Hippel FA, Park PJ, Kirch M, Absher DM, Myers RM, et al. Predicting future from past: The genomic basis of recurrent and rapid stickleback evolution. Science Advances. 7. PMID 34144992 DOI: 10.1126/sciadv.abg5285  0.679
2021 Kirch M, Romundset A, Gilbert MTP, Jones FC, Foote AD. Ancient and modern stickleback genomes reveal the demographic constraints on adaptation. Current Biology : Cb. PMID 33705715 DOI: 10.1016/j.cub.2021.02.027  0.389
2021 Schluter D, Marchinko KB, Arnegard ME, Zhang H, Brady SD, Jones FC, Bell MA, Kingsley DM. Fitness maps to a large-effect locus in introduced stickleback populations. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33414274 DOI: 10.1073/pnas.1914889118  0.637
2020 Verta JP, Jones F. mRNA Extraction from Gill Tissue for RNA-sequencing. Bio-Protocol. 10: e3539. PMID 33659513 DOI: 10.21769/BioProtoc.3539  0.302
2019 Dréau A, Venu V, Avdievich E, Gaspar L, Jones FC. Genome-wide recombination map construction from single individuals using linked-read sequencing. Nature Communications. 10: 4309. PMID 31541091 DOI: 10.1038/S41467-019-12210-9  0.419
2019 Verta JP, Jones FC. Predominance of -regulatory changes in parallel expression divergence of sticklebacks. Elife. 8. PMID 31090544 DOI: 10.7554/Elife.43785  0.486
2018 Marques DA, Jones FC, Di Palma F, Kingsley DM, Reimchen TE. Experimental evidence for rapid genomic adaptation to a new niche in an adaptive radiation. Nature Ecology & Evolution. 2: 1130-1140. PMID 29942074 DOI: 10.1038/S41559-018-0581-8  0.663
2018 Lowe CB, Sanchez-Luege N, Howes TR, Brady SD, Daugherty RR, Jones FC, Bell MA, Kingsley DM. Corrigendum: Detecting differential copy number variation between groups of samples. Genome Research. 28: 766.1. PMID 29717001 DOI: 10.1101/Gr.237370.118  0.544
2017 Lowe CB, Sanchez-Luege N, Howes TR, Brady SD, Richardson RR, Jones FC, Bell MA, Kingsley DM. Detecting differential copy number variation between groups of samples. Genome Research. PMID 29229672 DOI: 10.1101/Gr.206938.116  0.639
2017 Bay RA, Arnegard ME, Conte GL, Best J, Bedford NL, McCann SR, Dubin ME, Chan YF, Jones FC, Kingsley DM, Schluter D, Peichel CL. Genetic Coupling of Female Mate Choice with Polygenic Ecological Divergence Facilitates Stickleback Speciation. Current Biology : Cb. PMID 29056455 DOI: 10.1016/J.Cub.2017.09.037  0.715
2017 Marques DA, Taylor JS, Jones FC, Di Palma F, Kingsley DM, Reimchen TE. Convergent evolution of SWS2 opsin facilitates adaptive radiation of threespine stickleback into different light environments. Plos Biology. 15: e2001627. PMID 28399148 DOI: 10.1371/Journal.Pbio.2001627  0.688
2016 Indjeian VB, Kingman GA, Jones FC, Guenther CA, Grimwood J, Schmutz J, Myers RM, Kingsley DM. Evolving New Skeletal Traits by cis-Regulatory Changes in Bone Morphogenetic Proteins. Cell. 164: 45-56. PMID 26774823 DOI: 10.1016/J.Cell.2015.12.007  0.634
2015 Conte GL, Arnegard ME, Best J, Chan YF, Jones FC, Kingsley DM, Schluter D, Peichel CL. Extent of QTL Reuse During Repeated Phenotypic Divergence of Sympatric Threespine Stickleback. Genetics. PMID 26384359 DOI: 10.1534/Genetics.115.182550  0.761
2015 O'Brown NM, Summers BR, Jones FC, Brady SD, Kingsley DM. A recurrent regulatory change underlying altered expression and Wnt response of the stickleback armor plates gene EDA. Elife. 4: e05290. PMID 25629660 DOI: 10.7554/Elife.05290  0.569
2015 O'Brown NM, Summers BR, Jones FC, Brady SD, Kingsley DM. Author response: A recurrent regulatory change underlying altered expression and Wnt response of the stickleback armor plates gene EDA Elife. DOI: 10.7554/Elife.05290.012  0.556
2014 Arnegard ME, McGee MD, Matthews B, Marchinko KB, Conte GL, Kabir S, Bedford N, Bergek S, Chan YF, Jones FC, Kingsley DM, Peichel CL, Schluter D. Genetics of ecological divergence during speciation. Nature. 511: 307-11. PMID 24909991 DOI: 10.1038/Nature13301  0.75
2014 Seehausen O, Butlin RK, Keller I, Wagner CE, Boughman JW, Hohenlohe PA, Peichel CL, Saetre GP, Bank C, Brännström A, Brelsford A, Clarkson CS, Eroukhmanoff F, Feder JL, Fischer MC, ... ... Jones FC, et al. Genomics and the origin of species. Nature Reviews. Genetics. 15: 176-92. PMID 24535286 DOI: 10.1038/Nrg3644  0.386
2014 Faria R, Renaut S, Galindo J, Pinho C, Melo-Ferreira J, Melo M, Jones F, Salzburger W, Schluter D, Butlin R. Advances in Ecological Speciation: an integrative approach. Molecular Ecology. 23: 513-21. PMID 24354648 DOI: 10.1111/Mec.12616  0.4
2013 Deagle BE, Jones FC, Absher DM, Kingsley DM, Reimchen TE. Phylogeography and adaptation genetics of stickleback from the Haida Gwaii archipelago revealed using genome-wide single nucleotide polymorphism genotyping. Molecular Ecology. 22: 1917-32. PMID 23452150 DOI: 10.1111/Mec.12215  0.687
2012 Wark AR, Mills MG, Dang LH, Chan YF, Jones FC, Brady SD, Absher DM, Grimwood J, Schmutz J, Myers RM, Kingsley DM, Peichel CL. Genetic architecture of variation in the lateral line sensory system of threespine sticklebacks. G3 (Bethesda, Md.). 2: 1047-56. PMID 22973542 DOI: 10.1534/G3.112.003079  0.731
2012 Jones FC, Grabherr MG, Chan YF, Russell P, Mauceli E, Johnson J, Swofford R, Pirun M, Zody MC, White S, Birney E, Searle S, Schmutz J, Grimwood J, Dickson MC, et al. The genomic basis of adaptive evolution in threespine sticklebacks. Nature. 484: 55-61. PMID 22481358 DOI: 10.1038/Nature10944  0.781
2012 Chan YF, Jones FC, McConnell E, Bryk J, Bünger L, Tautz D. Parallel selection mapping using artificially selected mice reveals body weight control loci. Current Biology : Cb. 22: 794-800. PMID 22445301 DOI: 10.1016/J.Cub.2012.03.011  0.61
2012 Jones FC, Chan YF, Schmutz J, Grimwood J, Brady SD, Southwick AM, Absher DM, Myers RM, Reimchen TE, Deagle BE, Schluter D, Kingsley DM. A genome-wide SNP genotyping array reveals patterns of global and repeated species-pair divergence in sticklebacks. Current Biology : Cb. 22: 83-90. PMID 22197244 DOI: 10.1016/J.Cub.2011.11.045  0.764
2012 Deagle BE, Jones FC, Chan YF, Absher DM, Kingsley DM, Reimchen TE. Population genomics of parallel phenotypic evolution in stickleback across stream-lake ecological transitions. Proceedings. Biological Sciences / the Royal Society. 279: 1277-86. PMID 21976692 DOI: 10.1098/Rspb.2011.1552  0.758
2011 Greenwood AK, Jones FC, Chan YF, Brady SD, Absher DM, Grimwood J, Schmutz J, Myers RM, Kingsley DM, Peichel CL. The genetic basis of divergent pigment patterns in juvenile threespine sticklebacks. Heredity. 107: 155-66. PMID 21304547 DOI: 10.1038/Hdy.2011.1  0.741
2010 Chan YF, Marks ME, Jones FC, Villarreal G, Shapiro MD, Brady SD, Southwick AM, Absher DM, Grimwood J, Schmutz J, Myers RM, Petrov D, Jónsson B, Schluter D, Bell MA, et al. Adaptive evolution of pelvic reduction in sticklebacks by recurrent deletion of a Pitx1 enhancer. Science (New York, N.Y.). 327: 302-5. PMID 20007865 DOI: 10.1126/Science.1182213  0.745
2009 Kitano J, Ross JA, Mori S, Kume M, Jones FC, Chan YF, Absher DM, Grimwood J, Schmutz J, Myers RM, Kingsley DM, Peichel CL. A role for a neo-sex chromosome in stickleback speciation. Nature. 461: 1079-83. PMID 19783981 DOI: 10.1038/Nature08441  0.677
2009 Chan YF, Villarreal G, Marks M, Shapiro M, Jones F, Petrov D, Dickson M, Southwick A, Absher D, Grimwood J, Schmutz J, Myers R, Jónsson B, Schluter D, Bell M, et al. S14-03 From trait to base pairs: Parallel evolution of pelvic reduction in three-spined sticklebacks occurs by repeated deletion of a tissue-specific pelvic enhancer at Pitx1 Mechanisms of Development. 126: S14-S15. DOI: 10.1016/J.Mod.2009.06.980  0.735
2008 Jones FC, Brown C, Braithwaite VA. Lack of Assortative Mating Between Incipient Species of Stickleback from a Hybrid Zone Behaviour. 145: 463-484. DOI: 10.1163/156853908792451520  0.421
2007 Brown C, Jones F, Braithwaite VA. Correlation between boldness and body mass in natural populations of the poeciliid Brachyrhaphis episcopi Journal of Fish Biology. 71: 1590-1601. DOI: 10.1111/J.1095-8649.2007.01627.X  0.352
2006 Jones FC, Brown C, Pemberton JM, Braithwaite VA. Reproductive isolation in a threespine stickleback hybrid zone. Journal of Evolutionary Biology. 19: 1531-44. PMID 16910983 DOI: 10.1111/J.1420-9101.2006.01122.X  0.587
2005 Brown C, Jones F, Braithwaite V. In situ examination of boldness-shyness traits in the tropical poeciliid, Brachyraphis episcopi Animal Behaviour. 70: 1003-1009. DOI: 10.1016/J.Anbehav.2004.12.022  0.4
2002 Gaggiotti OE, Jones F, Lee WM, Amos W, Harwood J, Nichols RA. Patterns of colonization in a metapopulation of grey seals. Nature. 416: 424-7. PMID 11919630 DOI: 10.1038/416424A  0.422
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