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Michael F. Covington - Publications

Affiliations: 
Amaryllis Nucleics 
Area:
Circadian Biology, Bioinformatics, Plant Molecular Biology, RNA Sequencing
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24 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Song YH, Kubota A, Kwon MS, Covington MF, Lee N, Taagen ER, Laboy Cintrón D, Hwang DY, Akiyama R, Hodge SK, Huang H, Nguyen NH, Nusinow DA, Millar AJ, Shimizu KK, et al. Molecular basis of flowering under natural long-day conditions in Arabidopsis. Nature Plants. PMID 30250277 DOI: 10.1038/S41477-018-0253-3  0.788
2017 Markelz RJC, Covington MF, Brock MT, Devisetty UK, Kliebenstein DJ, Weinig C, Maloof JN. Using RNA-seq for Genomic Scaffold Placement, Correcting Assemblies, and Genetic Map Creation in a Common Brassica rapa Mapping Population. G3 (Bethesda, Md.). PMID 28546385 DOI: 10.1534/g3.117.043000  0.549
2016 Müller-Moulé P, Nozue K, Pytlak ML, Palmer CM, Covington MF, Wallace AD, Harmer SL, Maloof JN. YUCCA auxin biosynthetic genes are required for Arabidopsis shade avoidance. Peerj. 4: e2574. PMID 27761349 DOI: 10.7717/Peerj.2574  0.778
2016 Fulop D, Ranjan A, Ofner I, Covington MF, Chitwood DH, West D, Ichihashi Y, Headland L, Zamir D, Maloof JN, Sinha NR. A New Advanced Backcross Tomato Population Enables High Resolution Leaf QTL Mapping and Gene Identification. G3 (Bethesda, Md.). PMID 27510891 DOI: 10.1534/G3.116.030536  0.587
2016 Brock MT, Lucas LK, Anderson NA, Rubin MJ, Markelz RJ, Covington MF, Devisetty UK, Chapple C, Maloof JN, Weinig C. Genetic architecture, biochemical underpinnings, and ecological impact of floral UV patterning. Molecular Ecology. PMID 26800256 DOI: 10.1111/Mec.13542  0.631
2016 An N, Palmer CM, Baker RL, Markelz RJC, Ta J, Covington MF, Maloof JN, Welch SM, Weinig C. Plant high-throughput phenotyping using photogrammetry and imaging techniques to measure leaf length and rosette area Computers and Electronics in Agriculture. 127: 376-394. DOI: 10.1016/J.Compag.2016.04.002  0.658
2015 Baker RL, Leong WF, Brock MT, Markelz RJ, Covington MF, Devisetty UK, Edwards CE, Maloof J, Welch S, Weinig C. Modeling development and quantitative trait mapping reveal independent genetic modules for leaf size and shape. The New Phytologist. PMID 26083847 DOI: 10.1111/Nph.13509  0.626
2014 Devisetty UK, Covington MF, Tat AV, Lekkala S, Maloof JN. Polymorphism identification and improved genome annotation of Brassica rapa through Deep RNA sequencing. G3 (Bethesda, Md.). 4: 2065-78. PMID 25122667 DOI: 10.1534/g3.114.012526  0.589
2014 Chitwood DH, Ranjan A, Martinez CC, Headland LR, Thiem T, Kumar R, Covington MF, Hatcher T, Naylor DT, Zimmerman S, Downs N, Raymundo N, Buckler ES, Maloof JN, Aradhya M, et al. A modern ampelography: a genetic basis for leaf shape and venation patterning in grape. Plant Physiology. 164: 259-72. PMID 24285849 DOI: 10.1104/Pp.113.229708  0.624
2013 Chitwood DH, Kumar R, Headland LR, Ranjan A, Covington MF, Ichihashi Y, Fulop D, Jiménez-Gómez JM, Peng J, Maloof JN, Sinha NR. A quantitative genetic basis for leaf morphology in a set of precisely defined tomato introgression lines. The Plant Cell. 25: 2465-81. PMID 23872539 DOI: 10.1105/Tpc.113.112391  0.616
2013 Koenig D, Jiménez-Gómez JM, Kimura S, Fulop D, Chitwood DH, Headland LR, Kumar R, Covington MF, Devisetty UK, Tat AV, Tohge T, Bolger A, Schneeberger K, Ossowski S, Lanz C, et al. Comparative transcriptomics reveals patterns of selection in domesticated and wild tomato. Proceedings of the National Academy of Sciences of the United States of America. 110: E2655-62. PMID 23803858 DOI: 10.1073/Pnas.1309606110  0.681
2013 Goodspeed D, Chehab EW, Covington MF, Braam J. Circadian control of jasmonates and salicylates: the clock role in plant defense. Plant Signaling & Behavior. 8: e23123. PMID 23299428 DOI: 10.4161/Psb.23123  0.778
2012 Goodspeed D, Chehab EW, Min-Venditti A, Braam J, Covington MF. Arabidopsis synchronizes jasmonate-mediated defense with insect circadian behavior. Proceedings of the National Academy of Sciences of the United States of America. 109: 4674-7. PMID 22331878 DOI: 10.1073/Pnas.1116368109  0.786
2010 Jones MA, Covington MF, DiTacchio L, Vollmers C, Panda S, Harmer SL. Jumonji domain protein JMJD5 functions in both the plant and human circadian systems. Proceedings of the National Academy of Sciences of the United States of America. 107: 21623-8. PMID 21115819 DOI: 10.1073/Pnas.1014204108  0.787
2008 Gong W, He K, Covington M, Dinesh-Kumar SP, Snyder M, Harmer SL, Zhu YX, Deng XW. The development of protein microarrays and their applications in DNA-protein and protein-protein interaction analyses of Arabidopsis transcription factors. Molecular Plant. 1: 27-41. PMID 19802365 DOI: 10.1093/Mp/Ssm009  0.747
2008 Covington MF, Maloof JN, Straume M, Kay SA, Harmer SL. Global transcriptome analysis reveals circadian regulation of key pathways in plant growth and development. Genome Biology. 9: R130. PMID 18710561 DOI: 10.1186/Gb-2008-9-8-R130  0.784
2007 Walley JW, Coughlan S, Hudson ME, Covington MF, Kaspi R, Banu G, Harmer SL, Dehesh K. Mechanical stress induces biotic and abiotic stress responses via a novel cis-element. Plos Genetics. 3: 1800-12. PMID 17953483 DOI: 10.1371/Journal.Pgen.0030172  0.762
2007 Covington MF, Harmer SL. The circadian clock regulates auxin signaling and responses in Arabidopsis. Plos Biology. 5: e222. PMID 17683202 DOI: 10.1371/Journal.Pbio.0050222  0.812
2007 Nozue K, Covington MF, Duek PD, Lorrain S, Fankhauser C, Harmer SL, Maloof JN. Rhythmic growth explained by coincidence between internal and external cues. Nature. 448: 358-61. PMID 17589502 DOI: 10.1038/Nature05946  0.792
2007 Harmer SL, Covington MF, Bläsing O, Stitt M. Circadian Regulation of Global Gene Expression and Metabolism Endogenous Plant Rhythms. 132-165. DOI: 10.1002/9780470988527.ch6  0.763
2001 Covington MF, Panda S, Liu XL, Strayer CA, Wagner DR, Kay SA. ELF3 modulates resetting of the circadian clock in Arabidopsis. The Plant Cell. 13: 1305-15. PMID 11402162 DOI: 10.1105/Tpc.000561  0.755
2001 Xing Liang Liu, Covington MF, Fankhauser C, Chory J, Wagner DR. ELF3 encodes a circadian clock-regulated nuclear protein that functions in an Arabidopsis PHYB signal transduction pathway Plant Cell. 13: 1293-1304. PMID 11402161 DOI: 10.1105/Tpc.13.6.1293  0.586
2001 Covington MF, Panda S, Liu XL, Strayer CA, Wagner DR, Kay SA. ELF3 Modulates Resetting of the Circadian Clock in Arabidopsis The Plant Cell. 13: 1305-1316. DOI: 10.1105/tpc.000561  0.426
2001 Liu XL, Covington MF, Fankhauser C, Chory J, Wagner DR. ELF3 Encodes a Circadian Clock–Regulated Nuclear Protein That Functions in an Arabidopsis PHYB Signal Transduction Pathway The Plant Cell. 13: 1293-1304. DOI: 10.1105/TPC.000475  0.386
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