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Shancen Zhao - Publications

Affiliations: 
BGI Agriculture 
Area:
Genomics, Plant evolution, Crop genetics
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31 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Niu J, Ma S, Zheng S, Zhang C, Lu Y, Si Y, Tian S, Shi X, Liu X, Naeem MK, Sun H, Hu Y, Wu H, Cui Y, Chen C, ... ... Zhao S, et al. Whole-genome sequencing of diverse wheat accessions uncovers genetic changes during modern breeding in China and the United States. The Plant Cell. PMID 37647532 DOI: 10.1093/plcell/koad229  0.314
2023 Li Y, Huang C, Liu Y, Zeng J, Yu H, Tong Z, Yuan X, Sui X, Fang D, Xiao B, Zhao S, Yuan C. CRISPR/Cas9-mediated seamless gene replacement in protoplasts expands the resistance spectrum to TMV-U1 strain in regenerated Nicotiana tabacum. Plant Biotechnology Journal. PMID 37610064 DOI: 10.1111/pbi.14159  0.311
2022 Wang X, Hu Y, He W, Yu K, Zhang C, Li Y, Yang W, Sun J, Li X, Zheng F, Zhou S, Kong L, Ling H, Zhao S, Liu D, et al. Whole-genome resequencing of the wheat A subgenome progenitor Triticum urartu provides insights into its demographic history and geographic adaptation. Plant Communications. 100345. PMID 35655430 DOI: 10.1016/j.xplc.2022.100345  0.382
2022 Li C, Nong W, Zhao S, Lin X, Xie Y, Cheung MY, Xiao Z, Wong AYP, Chan TF, Hui JHL, Lam HM. Differential microRNA expression, microRNA arm switching, and microRNA:long noncoding RNA interaction in response to salinity stress in soybean. Bmc Genomics. 23: 65. PMID 35057741 DOI: 10.1186/s12864-022-08308-y  0.531
2020 Liu H, Mullan D, Zhang C, Zhao S, Li X, Zhang A, Lu Z, Wang Y, Yan G. Major genomic regions responsible for wheat yield and its components as revealed by meta-QTL and genotype-phenotype association analyses. Planta. 252: 65. PMID 32970252 DOI: 10.1007/s00425-020-03466-3  0.322
2019 Feng J, Zhao S, Li M, Zhang C, Qu H, Li Q, Li J, Lin Y, Pu Z. Genome-wide genetic diversity detection and population structure analysis in sweetpotato (Ipomoea batatas) using RAD-seq. Genomics. PMID 31756427 DOI: 10.1016/j.ygeno.2019.11.010  0.323
2019 Feng K, Cui L, Wang L, Shan D, Tong W, Deng P, Yan Z, Wang M, Zhan H, Wu X, He W, Zhou X, Ji J, Zhang G, Mao L, ... ... Zhao S, et al. The improved assembly of 7DL chromosome provides insight into the structure and evolution of bread wheat. Plant Biotechnology Journal. PMID 31471988 DOI: 10.1111/Pbi.13240  0.434
2019 Wang Z, Miao H, Liu J, Xu B, Yao X, Xu C, Zhao S, Fang X, Jia C, Wang J, Zhang J, Li J, Xu Y, Wang J, Ma W, et al. Musa balbisiana genome reveals subgenome evolution and functional divergence. Nature Plants. PMID 31308504 DOI: 10.1038/S41477-019-0452-6  0.405
2019 Xia E, Li F, Tong W, Yang H, Wang S, Zhao J, Liu C, Gao L, Tai Y, She G, Sun J, Cao H, Gao Q, Li Y, Deng W, ... ... Zhao S, et al. The tea plant reference genome and improved gene annotation using long-read and paired-end sequencing data. Scientific Data. 6: 122. PMID 31308375 DOI: 10.1038/S41597-019-0127-1  0.45
2019 Li M, Zhang D, Gao Q, Luo Y, Zhang H, Ma B, Chen C, Whibley A, Zhang Y, Cao Y, Li Q, Guo H, Li J, Song Y, Zhang Y, ... ... Zhao S, et al. Genome structure and evolution of Antirrhinum majus L. Nature Plants. PMID 30692677 DOI: 10.1038/S41477-018-0349-9  0.447
2019 Zhang R, Zheng F, Wei S, Zhang S, Li G, Cao P, Zhao S. Evolution of Disease Defense Genes and Their Regulators in Plants. International Journal of Molecular Sciences. 20. PMID 30650550 DOI: 10.3390/ijms20020335  0.371
2018 Zeng X, Guo Y, Xu Q, Mascher M, Guo G, Li S, Mao L, Liu Q, Xia Z, Zhou J, Yuan H, Tai S, Wang Y, Wei Z, Song L, ... ... Zhao S, et al. Origin and evolution of qingke barley in Tibet. Nature Communications. 9: 5433. PMID 30575759 DOI: 10.1038/S41467-018-07920-5  0.377
2018 Li L, Li A, Song K, Meng J, Guo X, Li S, Li C, De Wit P, Que H, Wu F, Wang W, Qi H, Xu F, Cong R, Huang B, ... ... Zhao S, et al. Divergence and plasticity shape adaptive potential of the Pacific oyster. Nature Ecology & Evolution. PMID 30250157 DOI: 10.1038/S41559-018-0668-2  0.376
2018 Zhao H, Gao Z, Wang L, Wang J, Wang S, Fei B, Chen C, Shi C, Liu X, Zhang H, Lou Y, Chen L, Sun H, Zhou X, Wang S, ... ... Zhao S, et al. Chromosome-level reference genome and alternative splicing atlas of moso bamboo (Phyllostachys edulis). Gigascience. PMID 30202850 DOI: 10.1093/Gigascience/Giy115  0.347
2018 Zhao H, Wang S, Wang J, Chen C, Hao S, Chen L, Fei B, Han K, Li R, Shi C, Sun H, Wang S, Xu H, Yang K, Xu X, ... ... Zhao S, et al. The chromosome-level genome assemblies of two rattans (Calamus simplicifolius and Daemonorops jenkinsiana). Gigascience. PMID 30101322 DOI: 10.1093/Gigascience/Giy097  0.361
2018 Ling HQ, Ma B, Shi X, Liu H, Dong L, Sun H, Cao Y, Gao Q, Zheng S, Li Y, Yu Y, Du H, Qi M, Li Y, Lu H, ... ... Zhao S, et al. Genome sequence of the progenitor of wheat A subgenome Triticum urartu. Nature. PMID 29743678 DOI: 10.1038/s41586-018-0108-0  0.301
2018 Wei C, Yang H, Wang S, Zhao J, Liu C, Gao L, Xia E, Lu Y, Tai Y, She G, Sun J, Cao H, Tong W, Gao Q, Li Y, ... ... Zhao S, et al. Draft genome sequence of var. provides insights into the evolution of the tea genome and tea quality. Proceedings of the National Academy of Sciences of the United States of America. PMID 29678829 DOI: 10.1073/Pnas.1719622115  0.439
2018 Luan MB, Jian JB, Chen P, Chen JH, Chen JH, Gao Q, Gao G, Zhou JH, Chen KM, Guang XM, Chen JK, Zhang QQ, Wang XF, Fang L, Sun ZM, ... ... Zhao SC, et al. Draft genome sequence of ramie, Boehmeria nivea (L.) Gaudich. Molecular Ecology Resources. PMID 29423997 DOI: 10.1111/1755-0998.12766  0.333
2016 Zheng F, Wu H, Zhang R, Li S, He W, Wong FL, Li G, Zhao S, Lam HM. Molecular phylogeny and dynamic evolution of disease resistance genes in the legume family. Bmc Genomics. 17: 402. PMID 27229309 DOI: 10.1186/S12864-016-2736-9  0.553
2015 Zhao S, Zheng F, He W, Wu H, Pan S, Lam HM. Impacts of nucleotide fixation during soybean domestication and improvement. Bmc Plant Biology. 15: 81. PMID 25849896 DOI: 10.1186/S12870-015-0463-Z  0.562
2015 Yang H, Li C, Lam HM, Clements J, Yan G, Zhao S. Sequencing consolidates molecular markers with plant breeding practice. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 128: 779-95. PMID 25821196 DOI: 10.1007/S00122-015-2499-8  0.57
2015 Zeng X, Long H, Wang Z, Zhao S, Tang Y, Huang Z, Wang Y, Xu Q, Mao L, Deng G, Yao X, Li X, Bai L, Yuan H, Pan Z, et al. The draft genome of Tibetan hulless barley reveals adaptive patterns to the high stressful Tibetan Plateau. Proceedings of the National Academy of Sciences of the United States of America. 112: 1095-100. PMID 25583503 DOI: 10.1073/pnas.1423628112  0.363
2014 Qin C, Yu C, Shen Y, Fang X, Chen L, Min J, Cheng J, Zhao S, Xu M, Luo Y, Yang Y, Wu Z, Mao L, Wu H, Ling-Hu C, et al. Whole-genome sequencing of cultivated and wild peppers provides insights into Capsicum domestication and specialization. Proceedings of the National Academy of Sciences of the United States of America. 111: 5135-40. PMID 24591624 DOI: 10.1073/Pnas.1400975111  0.433
2013 He N, Zhang C, Qi X, Zhao S, Tao Y, Yang G, Lee TH, Wang X, Cai Q, Li D, Lu M, Liao S, Luo G, He R, Tan X, ... ... Zhao S, et al. Draft genome sequence of the mulberry tree Morus notabilis. Nature Communications. 4: 2445. PMID 24048436 DOI: 10.1038/Ncomms3445  0.479
2013 Li YH, Zhao SC, Ma JX, Li D, Yan L, Li J, Qi XT, Guo XS, Zhang L, He WM, Chang RZ, Liang QS, Guo Y, Ye C, Wang XB, et al. Molecular footprints of domestication and improvement in soybean revealed by whole genome re-sequencing. Bmc Genomics. 14: 579. PMID 23984715 DOI: 10.1186/1471-2164-14-579  0.359
2013 Gao ZY, Zhao SC, He WM, Guo LB, Peng YL, Wang JJ, Guo XS, Zhang XM, Rao YC, Zhang C, Dong GJ, Zheng FY, Lu CX, Hu J, Zhou Q, et al. Dissecting yield-associated loci in super hybrid rice by resequencing recombinant inbred lines and improving parental genome sequences. Proceedings of the National Academy of Sciences of the United States of America. 110: 14492-7. PMID 23940322 DOI: 10.1073/Pnas.1306579110  0.393
2013 Ling HQ, Zhao S, Liu D, Wang J, Sun H, Zhang C, Fan H, Li D, Dong L, Tao Y, Gao C, Wu H, Li Y, Cui Y, Guo X, et al. Draft genome of the wheat A-genome progenitor Triticum urartu. Nature. 496: 87-90. PMID 23535596 DOI: 10.1038/Nature11997  0.403
2013 Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, et al. Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation. Nature. 496: 91-5. PMID 23535592 DOI: 10.1038/Nature12028  0.484
2013 Varshney RK, Song C, Saxena RK, Azam S, Yu S, Sharpe AG, Cannon S, Baek J, Rosen BD, Tar'an B, Millan T, Zhang X, Ramsay LD, Iwata A, Wang Y, ... ... Zhao S, et al. Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nature Biotechnology. 31: 240-6. PMID 23354103 DOI: 10.1038/Nbt.2491  0.355
2013 Zhao S, Zheng P, Dong S, Zhan X, Wu Q, Guo X, Hu Y, He W, Zhang S, Fan W, Zhu L, Li D, Zhang X, Chen Q, Zhang H, et al. Whole-genome sequencing of giant pandas provides insights into demographic history and local adaptation. Nature Genetics. 45: 67-71. PMID 23242367 DOI: 10.1038/Ng.2494  0.355
2010 Li R, Fan W, Tian G, Zhu H, He L, Cai J, Huang Q, Cai Q, Li B, Bai Y, Zhang Z, Zhang Y, Wang W, Li J, Wei F, ... ... Zhao S, et al. The sequence and de novo assembly of the giant panda genome. Nature. 463: 311-7. PMID 20010809 DOI: 10.1038/Nature08696  0.414
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