| Year |
Citation |
Score |
| 2020 |
Zhou L, Chan JCY, Chupin S, Gueguen N, Desquiret-Dumas V, Koh SK, Li J, Gao Y, Deng L, Verma C, Beuerman RW, Chan ECY, Milea D, Reynier P. Increased Protein -Glutathionylation in Leber's Hereditary Optic Neuropathy (LHON). International Journal of Molecular Sciences. 21. PMID 32344771 DOI: 10.3390/Ijms21083027 |
0.323 |
|
| 2020 |
Cocco E, Lee JE, Kannan S, Schram AM, Won HH, Shifman S, Kulick A, Baldino L, Toska E, Arena S, Mussolin B, Kannan R, Vasan N, Gorelick AN, Berger MF, ... ... Verma C, et al. Abstract 5680: TRK xDFG mutations trigger a sensitivity switch from type I to II kinase inhibitors Cancer Research. 80: 5680-5680. DOI: 10.1158/1538-7445.Am2020-5680 |
0.32 |
|
| 2019 |
Harish M, Kannan S, Puttagunta S, Pradhan M, Verma C, Venkatraman P. A novel determinant of PSMD9 PDZ binding guides the evolution of first generation of super binding peptides. Biochemistry. PMID 31287951 DOI: 10.1021/acs.biochem.9b00308 |
0.307 |
|
| 2018 |
Chan CY, Soh ACK, Kioh DYQ, Li J, Verma C, Koh SK, Beuerman RW, Zhou L, Chan ECY. Reactive Metabolite-induced Protein Glutathionylation: a Potentially Novel Mechanism Underlying Acetaminophen Hepatotoxicity. Molecular & Cellular Proteomics : McP. PMID 30006487 DOI: 10.1074/Mcp.Ra118.000875 |
0.32 |
|
| 2018 |
Kannan S, Venkatachalam G, Lim HH, Surana U, Verma C. Conformational landscape of the epidermal growth factor receptor kinase reveals a mutant specific allosteric pocket. Chemical Science. 9: 5212-5222. PMID 29997876 DOI: 10.1039/C8Sc01262H |
0.39 |
|
| 2018 |
Wong YH, Kumar A, Liew CW, Tharakaraman K, Srinivasaraghavan K, Sasisekharan R, Verma C, Lescar J. Molecular basis for dengue virus broad cross-neutralization by humanized monoclonal antibody 513. Scientific Reports. 8: 8449. PMID 29855525 DOI: 10.1038/S41598-018-26800-Y |
0.326 |
|
| 2018 |
Lau QY, Li J, Sani MA, Sinha S, Li Y, Ng FM, Kang C, Bhattacharjya S, Separovic F, Verma C, Chia CSB. Elucidating the bactericidal mechanism of action of the linear antimicrobial tetrapeptide BRBR-NH. Biochimica Et Biophysica Acta. PMID 29758185 DOI: 10.1016/J.Bbamem.2018.05.004 |
0.302 |
|
| 2017 |
Prasanna Kumar A, Nguyen MN, Verma C, Lukman S. Structural analysis of protein tyrosine phosphatase 1B reveals potentially druggable allosteric binding sites. Proteins. PMID 29235148 DOI: 10.1002/Prot.25440 |
0.369 |
|
| 2017 |
Kaan HYK, Sim AYL, Tan SKJ, Verma C, Song H. Targeting YAP/TAZ-TEAD protein-protein interactions using fragment-based and computational modeling approaches. Plos One. 12: e0178381. PMID 28570566 DOI: 10.1371/Journal.Pone.0178381 |
0.371 |
|
| 2017 |
Badowski C, Sim AYL, Verma C, Szeverényi I, Natesavelalar C, Terron-Kwiatkowski A, Harper J, O'Toole EA, Lane EB. Modeling the Structure of Keratin 1 and 10 Terminal Domains and their Misassembly in Keratoderma. The Journal of Investigative Dermatology. PMID 28526297 DOI: 10.1016/J.Jid.2017.03.038 |
0.303 |
|
| 2017 |
Irani MA, Kannan S, Verma C. Role of N-glycosylation in EGFR ectodomain ligand binding. Proteins. PMID 28486782 DOI: 10.1002/Prot.25314 |
0.346 |
|
| 2017 |
Kannan S, Pradhan MR, Tiwari G, Tan WC, Chowbay B, Tan EH, Tan DS, Verma C. Hydration effects on the efficacy of the Epidermal growth factor receptor kinase inhibitor afatinib. Scientific Reports. 7: 1540. PMID 28484248 DOI: 10.1038/S41598-017-01491-Z |
0.328 |
|
| 2017 |
Lee XA, Verma C, Sim AYL. Designing dual inhibitors of Mdm2/MdmX: Unexpected coupling of water with gatekeeper Y100/99. Proteins. PMID 28425639 DOI: 10.1002/Prot.25310 |
0.379 |
|
| 2017 |
Li J, Hu Z, Beuerman RW, Verma CS. Molecular Environment Modulates Conformational Differences between Crystal and Solution States of Human beta-defensin 2. The Journal of Physical Chemistry. B. PMID 28294607 DOI: 10.1021/Acs.Jpcb.7B00083 |
0.337 |
|
| 2017 |
Loke JJ, Kumar A, Hoon S, Verma CS, Miserez A. Hierarchical Assembly of Tough Bioelastomeric Egg Capsules is Mediated by a Bundling Protein. Biomacromolecules. PMID 28196415 DOI: 10.1021/Acs.Biomac.6B01810 |
0.315 |
|
| 2017 |
Marzinek JK, Bag N, Huber RG, Holdbrook DA, Wohland T, Verma C, Bond PJ. Multiscale Dynamics of Flavivirus Fusion Peptides - Membrane Interactions via Simulation and Experiments Biophysical Journal. 112: 328a. DOI: 10.1016/J.Bpj.2016.11.1776 |
0.334 |
|
| 2017 |
Marzinek JK, Holdbrook D, Huber RG, Verma C, Bond PJ. Simulations Help Unravel Flavivirus Envelope Structure and Function Biophysical Journal. 112: 309a. DOI: 10.1016/J.Bpj.2016.11.1677 |
0.321 |
|
| 2016 |
Siau JW, Coffill CR, Zhang WV, Tan YS, Hundt J, Lane D, Verma C, Ghadessy F. Functional characterization of p53 pathway components in the ancient metazoan Trichoplax adhaerens. Scientific Reports. 6: 33972. PMID 27678309 DOI: 10.1038/Srep33972 |
0.332 |
|
| 2016 |
Marzinek JK, Holdbrook DA, Huber RG, Verma C, Bond PJ. Pushing the Envelope: Dengue Viral Membrane Coaxed into Shape by Molecular Simulations. Structure (London, England : 1993). PMID 27396828 DOI: 10.1016/J.Str.2016.05.014 |
0.302 |
|
| 2016 |
Ouaray Z, ElSawy KM, Lane DP, Essex JW, Verma C. Reactivation of mutant p53: Constraints on mechanism highlighted by principal component analysis of the DNA binding domain. Proteins. PMID 27317883 DOI: 10.1002/Prot.25089 |
0.376 |
|
| 2016 |
Aronica PG, Verma C, Popovic B, Leatherbarrow RJ, Gould IR. The Parasol Protocol for computational mutagenesis. Protein Engineering, Design & Selection : Peds. PMID 27255759 DOI: 10.1093/Protein/Gzw009 |
0.322 |
|
| 2016 |
Wei SJ, Chee S, Yurlova L, Lane D, Verma C, Brown C, Ghadessy F. Avoiding drug resistance through extended drug target interfaces: a case for stapled peptides. Oncotarget. PMID 27057630 DOI: 10.18632/Oncotarget.8572 |
0.356 |
|
| 2016 |
Chattopadhyay A, O'Connor CJ, Zhang F, Galvagnion C, Galloway WR, Tan YS, Stokes JE, Rahman T, Verma C, Spring DR, Itzhaki LS. Discovery of a small-molecule binder of the oncoprotein gankyrin that modulates gankyrin activity in the cell. Scientific Reports. 6: 23732. PMID 27046077 DOI: 10.1038/Srep23732 |
0.367 |
|
| 2016 |
Marzinek JK, Lakshminarayanan R, Goh E, Huber RG, Panzade S, Verma C, Bond PJ. Characterizing the Conformational Landscape of Flavivirus Fusion Peptides via Simulation and Experiment. Scientific Reports. 6: 19160. PMID 26785994 DOI: 10.1038/Srep19160 |
0.344 |
|
| 2016 |
Castel P, Ellis H, Bago R, Toska E, Srinivasaraghavan K, Carmona FJ, Razavi P, Verma C, Dickler M, Chandarlapaty S, Brogi E, Alessi D, Baselga J, Scaltriti M. Abstract 2107: PDK1 blockade overcomes intrinsic resistance to PI3Kα inhibition Cancer Research. 76: 2107-2107. DOI: 10.1158/1538-7445.Am2016-2107 |
0.303 |
|
| 2016 |
Kumar A, Kannan S, Lescar J, Verma C, Miserez A. Squid's Suckerin Proteins in Bits & Bytes Biophysical Journal. 110: 341a. DOI: 10.1016/J.Bpj.2015.11.1835 |
0.315 |
|
| 2015 |
Lau YH, Wu Y, Rossmann M, Tan BX, de Andrade P, Tan YS, Verma C, McKenzie GJ, Venkitaraman AR, Hyvönen M, Spring DR. Double Strain-Promoted Macrocyclization for the Rapid Selection of Cell-Active Stapled Peptides. Angewandte Chemie (International Ed. in English). 54: 15410-3. PMID 26768531 DOI: 10.1002/Anie.201508416 |
0.34 |
|
| 2015 |
Petrone L, Kumar A, Sutanto CN, Patil NJ, Kannan S, Palaniappan A, Amini S, Zappone B, Verma C, Miserez A. Mussel adhesion is dictated by time-regulated secretion and molecular conformation of mussel adhesive proteins. Nature Communications. 6: 8737. PMID 26508080 DOI: 10.1038/Ncomms9737 |
0.32 |
|
| 2015 |
Sangith N, Srinivasaraghavan K, Sahu I, Desai A, Medipally S, Somavarappu AK, Verma C, Venkatraman P. Corrigendum to "Discovery of novel interacting partners of PSMD9, a proteasomal chaperone: Role of an Atypical and versatile PDZ-domain motif interaction and identification of putative functional modules" [FEBS Open Bio 4 (2014) 571-583]. Febs Open Bio. 5: 731-2. PMID 26448906 DOI: 10.1016/J.Fob.2015.06.010 |
0.359 |
|
| 2015 |
Ochsenbein F, Morelli X, Verma C. Editorial. Protein-Protein Interaction Analysis and Modulation. Progress in Biophysics and Molecular Biology. 119: 1. PMID 26345255 DOI: 10.1016/J.Pbiomolbio.2015.08.019 |
0.301 |
|
| 2015 |
Narayan V, Landre V, Ning J, Hernychova L, Muller P, Verma C, Walkinshaw MD, Blackburn EA, Ball KL. Protein:protein Interactions Modulate the Docking-Dependent E3-Ubiquitin Ligase Activity of CHIP. Molecular & Cellular Proteomics : McP. PMID 26330542 DOI: 10.1074/Mcp.M115.051169 |
0.382 |
|
| 2015 |
Sim AY, Verma C. How does a hydrocarbon staple affect peptide hydrophobicity? Journal of Computational Chemistry. 36: 773-84. PMID 25706509 DOI: 10.1002/Jcc.23859 |
0.317 |
|
| 2015 |
Ma W, Fuentes G, Shi X, Verma C, Radda GK, Han W. FoxO1 negatively regulates leptin-induced POMC transcription through its direct interaction with STAT3. The Biochemical Journal. 466: 291-8. PMID 25510553 DOI: 10.1042/Bj20141109 |
0.72 |
|
| 2015 |
Ng YZ, Kannan S, Lane DP, Fuentes G, Verma CS. mAb806 binding to epidermal growth factor receptor: a computational study. Proteins. 83: 153-68. PMID 25370927 DOI: 10.1002/Prot.24714 |
0.693 |
|
| 2014 |
Sim AY, Joseph T, Lane DP, Verma C. Mechanism of Stapled Peptide Binding to MDM2: Possible Consequences for Peptide Design. Journal of Chemical Theory and Computation. 10: 1753-61. PMID 26580383 DOI: 10.1021/Ct4009238 |
0.36 |
|
| 2014 |
Chee SM, Wongsantichon J, Soo Tng Q, Robinson R, Joseph TL, Verma C, Lane DP, Brown CJ, Ghadessy FJ. Structure of a stapled peptide antagonist bound to nutlin-resistant Mdm2. Plos One. 9: e104914. PMID 25115702 DOI: 10.1371/Journal.Pone.0104914 |
0.362 |
|
| 2014 |
Sangith N, Srinivasaraghavan K, Sahu I, Desai A, Medipally S, Somavarappu AK, Verma C, Venkatraman P. Discovery of novel interacting partners of PSMD9, a proteasomal chaperone: Role of an Atypical and versatile PDZ-domain motif interaction and identification of putative functional modules. Febs Open Bio. 4: 571-83. PMID 25009770 DOI: 10.1016/J.Fob.2014.05.005 |
0.381 |
|
| 2014 |
Tan YS, Spring DR, Abell C, Verma C. The use of chlorobenzene as a probe molecule in molecular dynamics simulations. Journal of Chemical Information and Modeling. 54: 1821-7. PMID 24910248 DOI: 10.1021/Ci500215X |
0.36 |
|
| 2014 |
Lau YH, de Andrade P, Sköld N, McKenzie GJ, Venkitaraman AR, Verma C, Lane DP, Spring DR. Investigating peptide sequence variations for 'double-click' stapled p53 peptides. Organic & Biomolecular Chemistry. 12: 4074-7. PMID 24817343 DOI: 10.1039/C4Ob00742E |
0.309 |
|
| 2014 |
Goh WL, Lee MY, Joseph TL, Quah ST, Brown CJ, Verma C, Brenner S, Ghadessy FJ, Teo YN. Molecular rotors as conditionally fluorescent labels for rapid detection of biomolecular interactions. Journal of the American Chemical Society. 136: 6159-62. PMID 24494589 DOI: 10.1021/Ja413031H |
0.335 |
|
| 2014 |
Lukman S, Verma CS, Fuentes G. Exploiting protein intrinsic flexibility in drug design. Advances in Experimental Medicine and Biology. 805: 245-69. PMID 24446365 DOI: 10.1007/978-3-319-02970-2_11 |
0.711 |
|
| 2013 |
Wei SJ, Joseph T, Chee S, Li L, Yurlova L, Zolghadr K, Brown C, Lane D, Verma C, Ghadessy F. Inhibition of nutlin-resistant HDM2 mutants by stapled peptides. Plos One. 8: e81068. PMID 24278380 DOI: 10.1371/Journal.Pone.0081068 |
0.341 |
|
| 2013 |
Pereira M, Verma CS, Fuentes G. Differences in the binding affinities of ErbB family: heterogeneity in the prediction of resistance mutants. Plos One. 8: e77054. PMID 24194858 DOI: 10.1371/Journal.Pone.0077054 |
0.698 |
|
| 2013 |
Hernychova L, Man P, Verma C, Nicholson J, Sharma CA, Ruckova E, Teo JY, Ball K, Vojtesek B, Hupp TR. Identification of a second Nutlin-3 responsive interaction site in the N-terminal domain of MDM2 using hydrogen/deuterium exchange mass spectrometry. Proteomics. 13: 2512-25. PMID 23776060 DOI: 10.1002/Pmic.201300029 |
0.409 |
|
| 2013 |
Wei SJ, Joseph T, Sim AY, Yurlova L, Zolghadr K, Lane D, Verma C, Ghadessy F. In vitro selection of mutant HDM2 resistant to Nutlin inhibition. Plos One. 8: e62564. PMID 23653682 DOI: 10.1371/Journal.Pone.0062564 |
0.372 |
|
| 2013 |
Zou H, Koh JJ, Li J, Qiu S, Aung TT, Lin H, Lakshminarayanan R, Dai X, Tang C, Lim FH, Zhou L, Tan AL, Verma C, Tan DT, Chan HS, et al. Design and synthesis of amphiphilic xanthone-based, membrane-targeting antimicrobials with improved membrane selectivity. Journal of Medicinal Chemistry. 56: 2359-73. PMID 23441632 DOI: 10.1021/Jm301683J |
0.302 |
|
| 2013 |
Li J, Liu S, Lakshminarayanan R, Bai Y, Pervushin K, Verma C, Beuerman RW. Molecular simulations suggest how a branched antimicrobial peptide perturbs a bacterial membrane and enhances permeability. Biochimica Et Biophysica Acta. 1828: 1112-21. PMID 23274275 DOI: 10.1016/J.Bbamem.2012.12.015 |
0.301 |
|
| 2012 |
Li J, Lakshminarayanan R, Bai Y, Liu S, Zhou L, Pervushin K, Verma C, Beuerman RW. Molecular dynamics simulations of a new branched antimicrobial peptide: a comparison of force fields. The Journal of Chemical Physics. 137: 215101. PMID 23231260 DOI: 10.1063/1.4768899 |
0.31 |
|
| 2012 |
Zhou W, Motakis E, Fuentes G, Verma CS. Macrostate identification from biomolecular simulations through time series analysis. Journal of Chemical Information and Modeling. 52: 2319-24. PMID 22928709 DOI: 10.1021/Ci300341V |
0.703 |
|
| 2012 |
Bai Y, Liu S, Li J, Lakshminarayanan R, Sarawathi P, Tang C, Ho D, Verma C, Beuerman RW, Pervushin K. Progressive structuring of a branched antimicrobial peptide on the path to the inner membrane target. The Journal of Biological Chemistry. 287: 26606-17. PMID 22700968 DOI: 10.1074/Jbc.M112.363259 |
0.302 |
|
| 2012 |
Sonkaria S, Fuentes G, Verma C, Narang R, Khare V, Fischer A, Faivre D. Insight into the assembly properties and functional organisation of the magnetotactic bacterial actin-like homolog, MamK. Plos One. 7: e34189. PMID 22586444 DOI: 10.1371/Journal.Pone.0034189 |
0.688 |
|
| 2012 |
Raghunathan D, Gayen S, Kumar A, Hunke C, Grüber G, Verma CS. Subunit F modulates ATP binding and migration in the nucleotide-binding subunit B of the A 1A O ATP synthase of Methanosarcina mazei Gö1 Journal of Bioenergetics and Biomembranes. 44: 213-224. PMID 22350011 DOI: 10.1007/S10863-012-9410-Y |
0.701 |
|
| 2011 |
Fuentes G, Scaltriti M, Baselga J, Verma CS. Synergy between trastuzumab and pertuzumab for human epidermal growth factor 2 (Her2) from colocalization: an in silico based mechanism. Breast Cancer Research : Bcr. 13: R54. PMID 21600050 DOI: 10.1186/Bcr2888 |
0.661 |
|
| 2011 |
Tan YS, Fuentes G, Verma C. A comparison of the dynamics of pantothenate synthetase from M. tuberculosis and E. coli: computational studies. Proteins. 79: 1715-27. PMID 21425349 DOI: 10.1002/Prot.22994 |
0.701 |
|
| 2011 |
Dastidar SG, Raghunathan D, Nicholson J, Hupp TR, Lane DP, Verma CS. Chemical states of the N-terminal "lid" of MDM2 regulate p53 binding: simulations reveal complexities of modulation. Cell Cycle (Georgetown, Tex.). 10: 82-9. PMID 21191186 DOI: 10.4161/Cc.10.1.14345 |
0.74 |
|
| 2011 |
Zhou L, Liu SP, Chen LY, Li J, Ong LB, Guo L, Wohland T, Tang CC, Lakshminarayanan R, Mavinahalli J, Verma C, Beuerman RW. The structural parameters for antimicrobial activity, human epithelial cell cytotoxicity and killing mechanism of synthetic monomer and dimer analogues derived from hBD3 C-terminal region. Amino Acids. 40: 123-33. PMID 20397033 DOI: 10.1007/S00726-010-0565-8 |
0.327 |
|
| 2011 |
Fuentes G, Dastidar SG, Madhumalar A, Verma CS. Role of protein flexibility in the discovery of new drugs Drug Development Research. 72: 26-35. DOI: 10.1002/Ddr.20399 |
0.705 |
|
| 2010 |
Namboodiri S, Verma C, Dhar PK, Giuliani A, Nair AS. Sequence signatures of allosteric proteins towards rational design. Systems and Synthetic Biology. 4: 271-80. PMID 22132054 DOI: 10.1007/S11693-011-9072-9 |
0.333 |
|
| 2010 |
Pennell S, Westcott S, Ortiz-Lombardía M, Patel D, Li J, Nott TJ, Mohammed D, Buxton RS, Yaffe MB, Verma C, Smerdon SJ. Structural and functional analysis of phosphothreonine-dependent FHA domain interactions. Structure (London, England : 1993). 18: 1587-95. PMID 21134638 DOI: 10.1016/J.Str.2010.09.014 |
0.403 |
|
| 2010 |
Fraser JA, Madhumalar A, Blackburn E, Bramham J, Walkinshaw MD, Verma C, Hupp TR. A novel p53 phosphorylation site within the MDM2 ubiquitination signal: II. A model in which phosphorylation at Ser269 induces a mutant conformation to p53 Journal of Biological Chemistry. 285: 37773-37786. PMID 20847049 DOI: 10.1074/Jbc.M110.143107 |
0.345 |
|
| 2010 |
Ng YW, Raghunathan D, Chan PM, Baskaran Y, Smith DJ, Lee CH, Verma C, Manser E. Why an A-loop phospho-mimetic fails to activate PAK1: understanding an inaccessible kinase state by molecular dynamics simulations. Structure (London, England : 1993). 18: 879-90. PMID 20637424 DOI: 10.1016/J.Str.2010.04.011 |
0.728 |
|
| 2010 |
Grüber G, Raghunathan D, Gayen S, Verma CS. Crosstalk along the stalk: Dynamics of the interaction of subunits B and F in the A1AO ATP synthase of methanosarcina mazei Gö1 Biochemistry. 49: 4181-4190. PMID 20377205 DOI: 10.1021/Bi9021236 |
0.693 |
|
| 2010 |
Joseph TL, Madhumalar A, Brown CJ, Lane DP, Verma CS. Differential binding of p53 and nutlin to MDM2 and MDMX: computational studies. Cell Cycle (Georgetown, Tex.). 9: 1167-81. PMID 20190571 DOI: 10.4161/Cc.9.6.11067 |
0.371 |
|
| 2010 |
Mavinahalli JN, Madhumalar A, Beuerman RW, Lane DP, Verma C. Differences in the transactivation domains of p53 family members: a computational study. Bmc Genomics. 11: S5. PMID 20158876 DOI: 10.1186/1471-2164-11-S1-S5 |
0.369 |
|
| 2010 |
Brown CJ, Dastidar SG, See HY, Coomber DW, Ortiz-Lombardía M, Verma C, Lane DP. Rational design and biophysical characterization of thioredoxin-based aptamers: insights into peptide grafting. Journal of Molecular Biology. 395: 871-83. PMID 19895821 DOI: 10.1016/J.Jmb.2009.10.069 |
0.347 |
|
| 2009 |
Madhumalar A, Lee HJ, Brown CJ, Lane D, Verma C. Design of a novel MDM2 binding peptide based on the p53 family. Cell Cycle (Georgetown, Tex.). 8: 2828-36. PMID 19713735 DOI: 10.4161/Cc.8.17.9516 |
0.344 |
|
| 2009 |
Bai Y, Liu S, Jiang P, Zhou L, Li J, Tang C, Verma C, Mu Y, Beuerman RW, Pervushin K. Structure-dependent charge density as a determinant of antimicrobial activity of peptide analogues of defensin. Biochemistry. 48: 7229-39. PMID 19580334 DOI: 10.1021/Bi900670D |
0.338 |
|
| 2009 |
Dastidar SG, Madhumalar A, Fuentes G, Lane DP, Verma CS. Forces mediating protein–protein interactions: a computational study of p53 “approaching” MDM2 Theoretical Chemistry Accounts. 125: 621-635. DOI: 10.1007/S00214-009-0682-1 |
0.711 |
|
| 2008 |
Lim WG, Chen X, Liu JP, Tan BJ, Zhou S, Smith A, Lees N, Hou L, Gu F, Yu XY, Du Y, Smith D, Verma C, Liu K, Duan W. The C-terminus of PRK2/PKNgamma is required for optimal activation by RhoA in a GTP-dependent manner. Archives of Biochemistry and Biophysics. 479: 170-8. PMID 18835241 DOI: 10.1016/J.Abb.2008.09.008 |
0.336 |
|
| 2008 |
Madhumalar A, Smith DJ, Verma C. Stability of the core domain of p53: insights from computer simulations. Bmc Bioinformatics. 9: S17. PMID 18315848 DOI: 10.1186/1471-2105-9-S1-S17 |
0.325 |
|
| 2007 |
Fuentes G, Ballesteros A, Verma CS. Enthalpic and entropic contributions in the transesterification of sucrose: computational study of lipases and subtilisin. Journal of Biomolecular Structure & Dynamics. 25: 145-55. PMID 17718593 DOI: 10.1080/07391102.2007.10507163 |
0.737 |
|
| 2006 |
Suresh A, Verma C. Modelling study of dimerization in mammalian defensins. Bmc Bioinformatics. 7: S17. PMID 17254301 DOI: 10.1186/1471-2105-7-S5-S17 |
0.315 |
|
| 2006 |
Yeong SS, Zhu Y, Smith D, Verma C, Lim WG, Tan BJ, Li QT, Cheung NS, Cai M, Zhu YZ, Zhou SF, Tan SL, Duan W. The last 10 amino acid residues beyond the hydrophobic motif are critical for the catalytic competence and function of protein kinase Calpha. The Journal of Biological Chemistry. 281: 30768-81. PMID 16895917 DOI: 10.1074/Jbc.M511278200 |
0.35 |
|
| 2006 |
Lim WG, Tan BJ, Zhu Y, Zhou S, Armstrong JS, Li QT, Dong Q, Chan E, Smith D, Verma C, Tan SL, Duan W. The very C-terminus of PRK1/PKN is essential for its activation by RhoA and downstream signaling. Cellular Signalling. 18: 1473-81. PMID 16427251 DOI: 10.1016/J.Cellsig.2005.11.009 |
0.348 |
|
| 2006 |
Zhu Y, Smith D, Verma C, Lim WG, Tan BJ, Armstrong JS, Zhou S, Chan E, Tan SL, Zhu YZ, Cheung NS, Duan W. The very C-terminus of protein kinase Cepsilon is critical for the full catalytic competence but its hydrophobic motif is dispensable for the interaction with 3-phosphoinositide-dependent kinase-1. Cellular Signalling. 18: 807-18. PMID 16137858 DOI: 10.1016/J.Cellsig.2005.07.005 |
0.36 |
|
| 2005 |
Akif M, Suhre K, Verma C, Mande SC. Conformational flexibility of Mycobacterium tuberculosis thioredoxin reductase: crystal structure and normal-mode analysis. Acta Crystallographica. Section D, Biological Crystallography. 61: 1603-11. PMID 16301794 DOI: 10.1107/S0907444905030519 |
0.307 |
|
| 2004 |
Fuentes G, Ballesteros A, Verma CS. Specificity in lipases: a computational study of transesterification of sucrose. Protein Science : a Publication of the Protein Society. 13: 3092-103. PMID 15557256 DOI: 10.1110/Ps.04724504 |
0.748 |
|
| 2004 |
Haire LF, Whyte SM, Vasisht N, Gill AC, Verma C, Dodson EJ, Dodson GG, Bayley PM. The crystal structure of the globular domain of sheep prion protein. Journal of Molecular Biology. 336: 1175-83. PMID 15037077 DOI: 10.1016/J.Jmb.2003.12.059 |
0.307 |
|
| 2003 |
Krzywda S, Brzozowski AM, Verma C, Karata K, Ogura T, Wilkinson AJ. The crystal structure of the AAA domain of the ATP-dependent protease FtsH of Escherichia coli at 1.5 A resolution. Structure (London, England : 1993). 10: 1073-83. PMID 12176385 DOI: 10.1016/S0969-2126(02)00806-7 |
0.341 |
|
| 2002 |
Fuentes G, Cruces MA, Plou FJ, Ballesteros A, Verma CS. Computational studies of subtilisin-catalyzed transesterification of sucrose: importance of entropic effects. Chembiochem : a European Journal of Chemical Biology. 3: 907-10. PMID 12210994 DOI: 10.1002/1439-7633(20020902)3:9<907::Aid-Cbic907>3.0.Co;2-6 |
0.708 |
|
| 2002 |
Brzozowski AM, Dodson EJ, Dodson GG, Murshudov GN, Verma C, Turkenburg JP, de Bree FM, Dauter Z. Structural origins of the functional divergence of human insulin-like growth factor-I and insulin. Biochemistry. 41: 9389-97. PMID 12135360 DOI: 10.1021/Bi020084J |
0.323 |
|
| 1996 |
Gul S, Dhillon PS, Verma C, Thomas EW, Brocklehurst K. Investigation of electrostatic interactions and binding effects in papin-ligand interaction. Biochemical Society Transactions. 24: 473S. PMID 8879017 DOI: 10.1042/Bst024473S |
0.325 |
|
| 1996 |
Sreedharan SK, Verma C, Caves LSD, Brocklehurst SM, Gharbia SE, Shah HN, Brocklehurst K. Demonstration that 1-trans-epoxysuccinyl-L-leucylamido-(4-guanidino) butane (E-64) is one of the most effective low Mr inhibitors of trypsin-catalysed hydrolysis. Characterization by kinetic analysis and by energy minimization and molecular dynamics simulation of the E-64-beta-trypsin complex. Biochemical Journal. 316: 777-786. PMID 8670152 DOI: 10.1042/Bj3160777 |
0.305 |
|
| 1996 |
Plou FJ, Kowlessur D, Malthouse JP, Mellor GW, Hartshorn MJ, Pinitglang S, Patel H, Topham CM, Thomas EW, Verma C, Brocklehurst K. Characterization of the electrostatic perturbation of a catalytic site (Cys)-S-/(His)-Im+H ion-pair in one type of serine proteinase architecture by kinetic and computational studies on chemically mutated subtilisin variants. Journal of Molecular Biology. 257: 1088-111. PMID 8632470 DOI: 10.1006/Jmbi.1996.0225 |
0.311 |
|
| 1995 |
Thomas MP, Verma C, Boyd SM, Brocklehurst K. The structural origins of the unusual specificities observed in the isolation of chymopapain M and actinidin by covalent chromatography and the lack of inhibition of chymopapain M by cystatin Biochemical Journal. 306: 39-46. PMID 7864827 DOI: 10.1042/Bj3060039 |
0.332 |
|
| 1994 |
Lawson DM, Brzozowski AM, Rety S, Verma C, Dodson GG. Probing the nature of substrate binding in Humicola lanuginosa lipase through X-ray crystallography and intuitive modelling. Protein Engineering. 7: 543-50. PMID 8029210 DOI: 10.1093/Protein/7.4.543 |
0.321 |
|
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