Ahmed M. Moustafa, PhD, BPharm - Publications

Affiliations: 
2016- Infectious Diseases Children’s Hospital of Philadelphia / University of Pennsylvania, Philadelphia, PA, United States 
Area:
Microbial Genomics, Evolutionary Biology, Phylogenetics
Website:
https://github.com/ahmedmagds/WhatsGNU

32 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Esteves MAC, Viana AS, Viçosa GN, Botelho AMN, Moustafa AM, Mansoldo FRP, Ferreira ALP, Vermelho AB, Ferreira-Carvalho BT, Planet PJ, Figueiredo AMS. RdJ detection tests to identify a unique MRSA clone of ST105-SCCII lineage and its variants disseminated in the metropolitan region of Rio de Janeiro. Frontiers in Microbiology. 14: 1275918. PMID 38053559 DOI: 10.3389/fmicb.2023.1275918  0.635
2023 Pitcher NJ, Feder A, Bolden N, Zirbes CF, Pamatmat AJ, Boyken L, Hill JJ, Bartels AR, Thurman AL, Reeb VC, Porterfield HS, Moustafa AM, Planet PJ, Fischer AJ. Parallel evolution of linezolid-resistant in patients with cystic fibrosis. Microbiology Spectrum. e0208423. PMID 37724867 DOI: 10.1128/spectrum.02084-23  0.612
2023 Martínez JRW, Planet PJ, Spencer-Sandino M, Rivas L, Díaz L, Moustafa AM, Quesille-Villalobos A, Riquelme-Neira R, Alcalde-Rico M, Hanson B, Carvajal LP, Rincón S, Reyes J, Lam M, Calderon JF, et al. Dynamics of the MRSA Population in a Chilean Hospital: a Phylogenomic Analysis (2000-2016). Microbiology Spectrum. e0535122. PMID 37338398 DOI: 10.1128/spectrum.05351-22  0.641
2023 Martínez JR, Alcalde-Rico M, Jara-Videla E, Rios R, Moustafa AM, Hanson B, Rivas L, Carvajal LP, Rincon S, Diaz L, Reyes J, Quesille-Villalobos A, Riquelme-Neira R, Undurraga EA, Olivares-Pacheco J, et al. Heavy Metal Pollution From a Major Earthquake and Tsunami in Chile Is Associated With Geographic Divergence of Clinical Isolates of Methicillin-Resistant in Latin America. Biorxiv : the Preprint Server For Biology. PMID 37293062 DOI: 10.1101/2023.05.18.541300  0.584
2023 Pitcher NJ, Feder A, Bolden N, Zirbes CF, Pamatmat AJ, Boyken L, Hill JJ, Thurman AL, Reeb VC, Porterfield HS, Moustafa AM, Planet PJ, Fischer AJ. Parallel Evolution of Linezolid Resistant in Patients with Cystic Fibrosis. Biorxiv : the Preprint Server For Biology. PMID 37205485 DOI: 10.1101/2023.05.02.539145  0.572
2023 Bianco CM, Moustafa AM, O'Brien K, Martin MA, Read TD, Kreiswirth BN, Planet PJ. Pre-epidemic evolution of the MRSA USA300 clade and a molecular key for classification. Frontiers in Cellular and Infection Microbiology. 13: 1081070. PMID 36761897 DOI: 10.3389/fcimb.2023.1081070  0.622
2022 Viana AS, Botelho AMN, Feder A, Moustafa AM, Santos Silva DN, Martini CL, Ferreira ALP, Silva-Carvalho MC, Ferreira-Carvalho BT, Planet PJ, Sá Figueiredo AM. High frequency of increased triclosan MIC among CC5 MRSA and risk of misclassification of the SCCmec into types. The Journal of Antimicrobial Chemotherapy. PMID 36173394 DOI: 10.1093/jac/dkac322  0.536
2022 Marques AD, Sherrill-Mix S, Everett JK, Reddy S, Hokama P, Roche AM, Hwang Y, Glascock A, Whiteside SA, Graham-Wooten J, Khatib LA, Fitzgerald AS, Moustafa AM, Bianco C, Rajagopal S, et al. SARS-CoV-2 Variants Associated with Vaccine Breakthrough in the Delaware Valley through Summer 2021. Mbio. e0378821. PMID 35130727 DOI: 10.1128/mbio.03788-21  0.545
2021 Miller JJ, Shah IT, Hatten J, Barekatain Y, Mueller EA, Moustafa AM, Edwards RL, Dowd CS, Hoops GC, Johnson RJ, Planet P, Muller FL, Jez J, Odom John AR. Correction: Structure-guided microbial targeting of antistaphylococcal prodrugs. Elife. 10. PMID 34821554 DOI: 10.7554/eLife.75743  0.478
2021 Marques AD, Sherrill-Mix S, Everett J, Reddy S, Hokama P, Roche AM, Hwang Y, Glascock A, Whiteside SA, Graham-Wooten J, Khatib LA, Fitzgerald AS, Moustafa AM, Bianco C, Rajagopal S, et al. SARS-CoV-2 variants associated with vaccine breakthrough in the Delaware Valley through summer 2021. Medrxiv : the Preprint Server For Health Sciences. PMID 34704098 DOI: 10.1101/2021.10.18.21264623  0.547
2021 Viana AS, Nunes Botelho AM, Moustafa AM, Boge CLK, Pires Ferreira AL, da Silva Carvalho MC, Guimarães MA, Costa BSS, de Mattos MC, Maciel SP, Echevarria-Lima J, Narechania A, O'Brien K, Ryan C, Gerber JS, et al. Multidrug-Resistant Methicillin-Resistant Staphylococcus aureus Associated with Bacteremia and Monocyte Evasion, Rio de Janeiro, Brazil. Emerging Infectious Diseases. 27: 2825-2835. PMID 34670645 DOI: 10.3201/eid2711.210097  0.747
2021 Saenkham-Huntsinger P, Hyre AN, Hanson BS, Donati GL, Adams LG, Ryan C, Londoño A, Moustafa AM, Planet PJ, Subashchandrabose S. Copper Resistance Promotes Fitness of Methicillin-Resistant Staphylococcus aureus during Urinary Tract Infection. Mbio. e0203821. PMID 34488457 DOI: 10.1128/mBio.02038-21  0.6
2021 Moustafa AM, Planet PJ. Emerging SARS-CoV-2 Diversity Revealed by Rapid Whole-Genome Sequence Typing. Genome Biology and Evolution. 13. PMID 34432021 DOI: 10.1093/gbe/evab197  0.586
2021 Moustafa AM, Planet PJ. Jumping a Moving Train: SARS-CoV-2 Evolution in Real Time. Journal of the Pediatric Infectious Diseases Society. PMID 34370041 DOI: 10.1093/jpids/piab051  0.57
2021 Miller JJ, Shah IT, Hatten J, Barekatain Y, Mueller EA, Moustafa AM, Edwards RL, Dowd CS, Planet P, Muller FL, Jez J, Odom John AR. Structure-guided microbial targeting of antistaphylococcal prodrugs. Elife. 10. PMID 34279224 DOI: 10.7554/eLife.66657  0.545
2021 Moustafa AM, Bianco C, Denu L, Ahmed A, Coffin SE, Neide B, Everett J, Reddy S, Rabut E, Deseignora J, Feldman MD, Rodino KG, Bushman F, Harris RM, Chang Mell J, et al. Comparative Analysis of Emerging B.1.1.7+E484K SARS-CoV-2 Isolates. Open Forum Infectious Diseases. 8: ofab300. PMID 34254040 DOI: 10.1093/ofid/ofab300  0.562
2021 Moustafa AM, Bianco C, Denu L, Ahmed A, Neide B, Everett J, Reddy S, Rabut E, Deseignora J, Feldman MD, Rodino KG, Bushman F, Harris RM, Mell JC, Planet PJ. Comparative Analysis of Emerging B.1.1.7+E484K SARS-CoV-2 isolates from Pennsylvania. Biorxiv : the Preprint Server For Biology. PMID 33907751 DOI: 10.1101/2021.04.21.440801  0.61
2021 Perelman SS, James DBA, Boguslawski KM, Nelson CW, Ilmain JK, Zwack EE, Prescott RA, Mohamed A, Tam K, Chan R, Narechania A, Pawline MB, Vozhilla N, Moustafa AM, Kim SY, et al. Genetic variation of staphylococcal LukAB toxin determines receptor tropism. Nature Microbiology. PMID 33875847 DOI: 10.1038/s41564-021-00890-3  0.726
2021 Moustafa AM, Velusamy SK, Denu L, Narechania A, Fine DH, Planet PJ. Adaptation by Ancient Horizontal Acquisition of Butyrate Metabolism Genes in Aggregatibacter actinomycetemcomitans. Mbio. 12. PMID 33758084 DOI: 10.1128/mBio.03581-20  0.725
2021 Moustafa AM, Otto W, Gai X, Pandey U, Ryutov A, Bootwalla M, Maglinte DT, Shen L, Ruble D, Ostrow D, Gerber JS, Bard JD, Harris RM, Planet PJ. Early pandemic molecular diversity of SARS-CoV-2 in children. Medrxiv : the Preprint Server For Health Sciences. PMID 33619507 DOI: 10.1101/2021.02.17.21251960  0.495
2020 Moustafa AM, Planet PJ. Emerging SARS-CoV-2 diversity revealed by rapid whole genome sequence typing. Biorxiv : the Preprint Server For Biology. PMID 33398274 DOI: 10.1101/2020.12.28.424582  0.589
2020 Moustafa AM, Lal A, Planet PJ. Comparative genomics in infectious disease. Current Opinion in Microbiology. 53: 61-70. PMID 32248056 DOI: 10.1016/J.Mib.2020.02.009  0.612
2020 Moustafa AM, Planet PJ. WhatsGNU: a tool for identifying proteomic novelty. Genome Biology. 21: 58. PMID 32138767 DOI: 10.1186/S13059-020-01965-W  0.625
2020 Moustafa AM, Planet PJ, Planet PJ. 464. Rapid whole genome sequence typing reveals multiple waves of SARS-CoV-2 spread Open Forum Infectious Diseases. 7: S299-S299. DOI: 10.1093/ofid/ofaa439.657  0.305
2019 Acker KP, Wong Fok Lung T, West E, Craft J, Narechania A, Smith H, O'Brien K, Moustafa AM, Lauren C, Planet PJ, Prince A. Strains of Staphylococcus aureus that Colonize and Infect Skin Harbor Mutations in Metabolic Genes. Iscience. 19: 281-290. PMID 31401351 DOI: 10.1016/J.Isci.2019.07.037  0.744
2019 Riquelme SA, Lozano C, Moustafa AM, Liimatta K, Tomlinson KL, Britto C, Khanal S, Gill SK, Narechania A, Azcona-Gutiérrez JM, DiMango E, Saénz Y, Planet P, Prince A. CFTR-PTEN-dependent mitochondrial metabolic dysfunction promotes airway infection. Science Translational Medicine. 11. PMID 31270271 DOI: 10.1126/Scitranslmed.Aav4634  0.726
2019 Botelho AMN, Cerqueira E Costa MO, Moustafa AM, Beltrame CO, Ferreira FA, Côrtes MF, Costa BSS, Silva DNS, Bandeira PT, Lima NCB, Souza RC, de Almeida LGP, Vasconcelos ATR, Narechania A, Ryan C, et al. Local Diversification of Methicillin- Resistant ST239 in South America After Its Rapid Worldwide Dissemination. Frontiers in Microbiology. 10: 82. PMID 30873127 DOI: 10.3389/Fmicb.2019.00082  0.754
2019 Martínez JRW, Diaz L, Rojas M, Rios R, Hanson B, Rivas LM, Spencer M, Moustafa AM, Araos Bralic R, Peters A, Reyes J, Carvajal LP, Luna C, Salles M, Alvarez C, et al. 556. Phylogenomic Epidemiology of Methicillin-Resistant Staphylococcus aureus (MRSA) Chilean-Cordobes Clone in Latin America Open Forum Infectious Diseases. 6: S263-S264. DOI: 10.1093/Ofid/Ofz360.625  0.644
2018 Zapotoczna M, Riboldi GP, Moustafa AM, Dickson E, Narechania A, Morrissey JA, Planet PJ, Holden MTG, Waldron KJ, Geoghegan JA. Mobile-Genetic-Element-Encoded Hypertolerance to Copper Protects Staphylococcus aureus from Killing by Host Phagocytes. Mbio. 9. PMID 30327441 DOI: 10.1128/Mbio.00550-18  0.737
2015 Moustafa AM, Ali SN, Bennett MD, Hyndman TH, Robertson ID, Edwards J. A Case-control Study of Haemorrhagic Septicaemia in Buffaloes and Cattle in Karachi, Pakistan, in 2012. Transboundary and Emerging Diseases. PMID 26189329 DOI: 10.1111/Tbed.12393  0.435
2015 Moustafa AM, Seemann T, Gladman S, Adler B, Harper M, Boyce JD, Bennett MD. Comparative Genomic Analysis of Asian Haemorrhagic Septicaemia-Associated Strains of Pasteurella multocida Identifies More than 90 Haemorrhagic Septicaemia-Specific Genes. Plos One. 10: e0130296. PMID 26151935 DOI: 10.1371/Journal.Pone.0130296  0.433
2013 Moustafa AM, Bennett MD, Edwards J, Azim K, Mesaik MA, Choudhary MI, Pathanasophon P, Worarach A, Ali Q, Abubakar M, Anjum R. Molecular typing of haemorrhagic septicaemia-associated Pasteurella multocida isolates from Pakistan and Thailand using multilocus sequence typing and pulsed-field gel electrophoresis. Research in Veterinary Science. 95: 986-90. PMID 23916592 DOI: 10.1016/J.Rvsc.2013.07.003  0.52
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