Jason T. Weir - Publications

Affiliations: 
University of Toronto, Toronto, ON, Canada 
Area:
Ornithology, Biogeography, Speciation, Genomics

61 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Weir JT, Aleixo A, Pulido-Santacruz P. Amazonian rivers are leaky barriers to gene flow in forest understory birds. Proceedings. Biological Sciences. 291: 20240795. PMID 39226930 DOI: 10.1098/rspb.2024.0795  0.807
2024 Dalapicolla J, Weir JT, Vilaça ST, Quaresma TF, Schneider MPC, Vasconcelos ATR, Aleixo A. Whole genomes show contrasting trends of population size changes and genomic diversity for an Amazonian endemic passerine over the late quaternary. Ecology and Evolution. 14: e11250. PMID 38660467 DOI: 10.1002/ece3.11250  0.312
2023 Anderson SAS, López-Fernández H, Weir JT. Ecology and the Origin of Nonephemeral Species. The American Naturalist. 201: 619-638. PMID 37130236 DOI: 10.1086/723763  0.491
2022 Mikkelsen EK, Weir JT. Phylogenomics Reveals that Mitochondrial Capture and Nuclear Introgression Characterizes Skua Species Proposed to be of Hybrid Origin. Systematic Biology. PMID 36546866 DOI: 10.1093/sysbio/syac078  0.471
2022 Anderson SAS, Weir JT. The role of divergent ecological adaptation during allopatric speciation in vertebrates. Science (New York, N.Y.). 378: 1214-1218. PMID 36520892 DOI: 10.1126/science.abo7719  0.436
2022 Bemmels JB, Haddrath O, Colbourne RM, Robertson HA, Weir JT. Legacy of supervolcanic eruptions on population genetic structure of brown kiwi. Current Biology : Cb. PMID 35728597 DOI: 10.1016/j.cub.2022.05.064  0.31
2022 Barrera-Guzmán AO, Aleixo A, Faccio M, de Melo Dantas S, Weir JT. Gene flow, genomic homogenization and the timeline to speciation in Amazonian manakins. Molecular Ecology. PMID 35665558 DOI: 10.1111/mec.16562  0.782
2021 Bemmels JB, Mikkelsen EK, Haddrath O, Colbourne RM, Robertson HA, Weir JT. Demographic decline and lineage-specific adaptations characterize New Zealand kiwi. Proceedings. Biological Sciences. 288: 20212362. PMID 34905706 DOI: 10.1098/rspb.2021.2362  0.354
2021 Luzuriaga-Aveiga VE, Ugarte M, Weir JT. Distinguishing genomic homogenization from parapatric speciation in an elevationally replacing pair of Ramphocelus tanagers. Molecular Ecology. PMID 34403554 DOI: 10.1111/mec.16128  0.394
2021 Bemmels JB, Bramwell AC, Anderson SAS, Luzuriaga-Aveiga VE, Mikkelsen EK, Weir JT. Geographic contact drives increased reproductive isolation in two cryptic Empidonax flycatchers. Molecular Ecology. PMID 34347907 DOI: 10.1111/mec.16105  0.824
2021 Anderson SAS, Weir JT. Character displacement drives trait divergence in a continental fauna. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33963076 DOI: 10.1073/pnas.2021209118  0.471
2020 Feng S, Stiller J, Deng Y, Armstrong J, Fang Q, Reeve AH, Xie D, Chen G, Guo C, Faircloth BC, Petersen B, Wang Z, Zhou Q, Diekhans M, Chen W, ... ... Weir JT, et al. Dense sampling of bird diversity increases power of comparative genomics. Nature. 587: 252-257. PMID 33177665 DOI: 10.1038/s41586-020-2873-9  0.34
2020 Cronemberger ÁA, Aleixo A, Mikkelsen EK, Weir JT. Postzygotic isolation drives genomic speciation between highly cryptic Hypocnemis antbirds from Amazonia. Evolution; International Journal of Organic Evolution. PMID 32984949 DOI: 10.1111/evo.14103  0.795
2020 Anderson SAS, Weir JT. A Comparative Test for Divergent Adaptation: Inferring Speciation Drivers from Functional Trait Divergence. The American Naturalist. 196: 429-442. PMID 32970469 DOI: 10.1086/710338  0.502
2020 Mikkelsen EK, Weir JT. The genome of the common scale-backed Antbird (Willisornis poecilinotus) reveals lineage-specific adaptations. Genomics. PMID 32771623 DOI: 10.1016/J.Ygeno.2020.07.047  0.381
2020 Elmore JA, Hager SB, Cosentino BJ, O'Connell TJ, Riding CS, Anderson ML, Bakermans MH, Boves TJ, Brandes D, Butler EM, Butler MW, Cagle NL, Calderón-Parra R, Capparella AP, Chen A, ... ... Weir JT, et al. Correlates of bird collisions with buildings across three North American countries. Conservation Biology : the Journal of the Society For Conservation Biology. PMID 32537779 DOI: 10.1111/Cobi.13569  0.502
2020 Lujan NK, Weir JT, Noonan BP, Lovejoy NR, Mandrak NE. Is Niagara Falls a barrier to gene flow in riverine fishes? A test using genome-wide SNP data from seven native species. Molecular Ecology. PMID 32202354 DOI: 10.1111/Mec.15406  0.555
2020 Pulido-Santacruz P, Aleixo A, Weir JT. Genomic data reveal a protracted window of introgression during the diversification of a neotropical woodcreeper radiation. Evolution; International Journal of Organic Evolution. 74: 842-858. PMID 31880313 DOI: 10.1111/Evo.13902  0.816
2020 Fitzgerald AM, Weir J, Ralston J, Warkentin IG, Whitaker DM, Kirchman JJ. Genetic structure and biogeographic history of the Bicknell’s Thrush/ Gray-cheeked Thrush species complex The Auk. 137: 1-20. DOI: 10.1093/Auk/Ukz066  0.604
2019 Weir JT, Price TD. Song playbacks demonstrate slower evolution of song discrimination in birds from Amazonia than from temperate North America. Plos Biology. 17: e3000478. PMID 31639139 DOI: 10.1371/Journal.Pbio.3000478  0.652
2019 Luzuriaga-Aveiga VE, Weir JT. Elevational differentiation accelerates trait evolution but not speciation rates in Amazonian birds. Ecology Letters. 22: 624-633. PMID 30714311 DOI: 10.1111/Ele.13229  0.555
2018 Barrera-Guzmán AO, Aleixo A, Shawkey MD, Weir JT. Reply to Rosenthal et al.: Both premating and postmating isolation likely contributed to manakin hybrid speciation. Proceedings of the National Academy of Sciences of the United States of America. PMID 29669925 DOI: 10.1073/Pnas.1804188115  0.787
2018 Ramón-Laca A, White DJ, Weir JT, Robertson HA. Extraction of DNA from captive-sourced feces and molted feathers provides a novel method for conservation management of New Zealand kiwi (spp.). Ecology and Evolution. 8: 3119-3130. PMID 29607011 DOI: 10.1002/Ece3.3795  0.422
2018 Pulido-Santacruz P, Aleixo A, Weir JT. Morphologically cryptic Amazonian bird species pairs exhibit strong postzygotic reproductive isolation. Proceedings. Biological Sciences. 285. PMID 29514967 DOI: 10.1098/Rspb.2017.2081  0.851
2018 Weir JT. Description of the song of the Nilgiri Thrush (Zoothera [aurea] neilgherriensis) and song differentiation across the Zoothera dauma species complex Avian Research. 9. DOI: 10.1186/S40657-018-0121-X  0.35
2017 Barrera-Guzmán AO, Aleixo A, Shawkey MD, Weir JT. Hybrid speciation leads to novel male secondary sexual ornamentation of an Amazonian bird. Proceedings of the National Academy of Sciences of the United States of America. PMID 29279398 DOI: 10.1073/Pnas.1717319115  0.821
2017 Cooney CR, Tobias JA, Weir JT, Botero CA, Seddon N. Sexual selection, speciation and constraints on geographical range overlap in birds. Ecology Letters. PMID 28513066 DOI: 10.1111/Ele.12780  0.347
2017 Hager SB, Cosentino BJ, Aguilar-Gómez MA, Anderson ML, Bakermans M, Boves TJ, Brandes D, Butler MW, Butler EM, Cagle NL, Calderón-Parra R, Capparella AP, Chen A, Cipollini K, Conkey AA, ... ... Weir J, et al. Continent-wide analysis of how urbanization affects bird-window collision mortality in North America Biological Conservation. 212: 209-215. DOI: 10.1016/J.Biocon.2017.06.014  0.308
2016 Weir JT, Haddrath O, Robertson HA, Colbourne RM, Baker AJ. Explosive ice age diversification of kiwi. Proceedings of the National Academy of Sciences of the United States of America. PMID 27573837 DOI: 10.1073/Pnas.1603795113  0.479
2016 Germain RM, Weir JT, Gilbert B. Species coexistence: macroevolutionary relationships and the contingency of historical interactions. Proceedings. Biological Sciences. 283: 20160047. PMID 27009226 DOI: 10.1098/Rspb.2016.0047  0.556
2016 Pulido-Santacruz P, Weir JT. Extinction as a driver of avian latitudinal diversity gradients. Evolution; International Journal of Organic Evolution. 70: 860-72. PMID 26940812 DOI: 10.1111/Evo.12899  0.826
2016 Germain RM, Weir JT, Gilbert B. Species coexistence: Macroevolutionary relationships and the contingency of historical interactions Proceedings of the Royal Society B: Biological Sciences. 283. DOI: 10.1098/rspb.2016.0047  0.472
2015 Weir JT, Faccio MS, Pulido-Santacruz P, Barrera-Guzmán AO, Aleixo A. Hybridization in headwater regions, and the role of rivers as drivers of speciation in Amazonian birds. Evolution; International Journal of Organic Evolution. 69: 1823-34. PMID 26095719 DOI: 10.1111/Evo.12696  0.724
2015 Rowe M, Albrecht T, Cramer ER, Johnsen A, Laskemoen T, Weir JT, Lifjeld JT. Postcopulatory sexual selection is associated with accelerated evolution of sperm morphology. Evolution; International Journal of Organic Evolution. 69: 1044-52. PMID 25655075 DOI: 10.1111/Evo.12620  0.385
2015 Weir JT, Lawson A. Evolutionary rates across gradients Methods in Ecology and Evolution. 6: 1278-1286. DOI: 10.1111/2041-210X.12419  0.742
2014 Weir JT. Environmental harshness, latitude and incipient speciation. Molecular Ecology. 23: 251-3. PMID 26010836 DOI: 10.1111/Mec.12606  0.577
2014 Lawson AM, Weir JT. Latitudinal gradients in climatic-niche evolution accelerate trait evolution at high latitudes. Ecology Letters. 17: 1427-36. PMID 25168260 DOI: 10.1111/Ele.12346  0.789
2014 Lepais O, Weir JT. SimRAD: an R package for simulation-based prediction of the number of loci expected in RADseq and similar genotyping by sequencing approaches. Molecular Ecology Resources. 14: 1314-21. PMID 24806844 DOI: 10.1111/1755-0998.12273  0.364
2014 Kennedy JD, Wang Z, Weir JT, Rahbek C, Fjeldså J, Price TD. Into and out of the tropics: The generation of the latitudinal gradient among New World passerine birds Journal of Biogeography. 41: 1746-1757. DOI: 10.1111/Jbi.12346  0.644
2013 Seddon N, Botero CA, Tobias JA, Dunn PO, Macgregor HE, Rubenstein DR, Uy JA, Weir JT, Whittingham LA, Safran RJ. Sexual selection accelerates signal evolution during speciation in birds. Proceedings. Biological Sciences / the Royal Society. 280: 20131065. PMID 23864596 DOI: 10.1098/Rspb.2013.1065  0.375
2013 Bloom DD, Weir JT, Piller KR, Lovejoy NR. Do freshwater fishes diversify faster than marine fishes? A test using state-dependent diversification analyses and molecular phylogenetics of new world silversides (atherinopsidae). Evolution; International Journal of Organic Evolution. 67: 2040-57. PMID 23815658 DOI: 10.1111/Evo.12074  0.543
2013 Weir JT, Mursleen S. Diversity-dependent cladogenesis and trait evolution in the adaptive radiation of the auks (aves: alcidae). Evolution; International Journal of Organic Evolution. 67: 403-16. PMID 23356613 DOI: 10.1111/J.1558-5646.2012.01786.X  0.461
2013 Desantis LM, Delehanty B, Weir JT, Boonstra R. Mediating free glucocorticoid levels in the blood of vertebrates: Are corticosteroid-binding proteins always necessary? Functional Ecology. 27: 107-119. DOI: 10.1111/1365-2435.12038  0.367
2012 Weir JT, Wheatcroft DJ, Price TD. The role of ecological constraint in driving the evolution of avian song frequency across a latitudinal gradient. Evolution; International Journal of Organic Evolution. 66: 2773-83. PMID 22946802 DOI: 10.1111/J.1558-5646.2012.01635.X  0.773
2012 Kennedy JD, Weir JT, Hooper DM, Tietze DT, Martens J, Price TD. Ecological limits on diversification of the Himalayan core Corvoidea. Evolution; International Journal of Organic Evolution. 66: 2599-613. PMID 22834756 DOI: 10.1111/J.1558-5646.2012.01618.X  0.684
2011 Chaves JA, Weir JT, Smith TB. Diversification in Adelomyia hummingbirds follows Andean uplift. Molecular Ecology. 20: 4564-76. PMID 21981387 DOI: 10.1111/J.1365-294X.2011.05304.X  0.499
2011 Weir JT, Price M. Andean uplift promotes lowland speciation through vicariance and dispersal in Dendrocincla woodcreepers. Molecular Ecology. 20: 4550-63. PMID 21981112 DOI: 10.1111/J.1365-294X.2011.05294.X  0.526
2011 Weir JT, Price TD. Limits to speciation inferred from times to secondary sympatry and ages of hybridizing species along a latitudinal gradient. The American Naturalist. 177: 462-9. PMID 21460568 DOI: 10.1086/658910  0.692
2011 Weir JT, Schluter D. Are rates of molecular evolution in mammals substantially accelerated in warmer environments? Proceedings. Biological Sciences / the Royal Society. 278: 1291-3; discussion 1. PMID 21288954 DOI: 10.1098/Rspb.2010.0388  0.664
2011 Weir JT, Wheatcroft D. A latitudinal gradient in rates of evolution of avian syllable diversity and song length. Proceedings. Biological Sciences / the Royal Society. 278: 1713-20. PMID 21068034 DOI: 10.1098/Rspb.2010.2037  0.776
2010 Harmon LJ, Losos JB, Jonathan Davies T, Gillespie RG, Gittleman JL, Bryan Jennings W, Kozak KH, McPeek MA, Moreno-Roark F, Near TJ, Purvis A, Ricklefs RE, Schluter D, Schulte Ii JA, Seehausen O, ... ... Weir JT, et al. Early bursts of body size and shape evolution are rare in comparative data. Evolution; International Journal of Organic Evolution. 64: 2385-96. PMID 20455932 DOI: 10.1111/J.1558-5646.2010.01025.X  0.759
2009 Weir JT, Bermingham E, Schluter D. The Great American Biotic Interchange in birds. Proceedings of the National Academy of Sciences of the United States of America. 106: 21737-42. PMID 19996168 DOI: 10.1073/Pnas.0903811106  0.609
2009 Weir JT. Implications Of Genetic Differentiation In Neotropical Montane Forest Birds Annals of the Missouri Botanical Garden. 96: 410-433. DOI: 10.3417/2008011  0.501
2008 Weir JT, Schluter D. Calibrating the avian molecular clock. Molecular Ecology. 17: 2321-8. PMID 18422932 DOI: 10.1111/J.1365-294X.2008.03742.X  0.582
2008 Weir JT, Bermingham E, Miller MJ, Klicka J, González MA. Phylogeography of a morphologically diverse Neotropical montane species, the Common Bush-Tanager (Chlorospingus ophthalmicus). Molecular Phylogenetics and Evolution. 47: 650-64. PMID 18378470 DOI: 10.1016/J.Ympev.2008.02.004  0.519
2008 Miller MJ, Bermingham E, Klicka J, Escalante P, do Amaral FS, Weir JT, Winker K. Out of Amazonia again and again: episodic crossing of the Andes promotes diversification in a lowland forest flycatcher. Proceedings. Biological Sciences / the Royal Society. 275: 1133-42. PMID 18285279 DOI: 10.1098/Rspb.2008.0015  0.55
2008 Harmon LJ, Weir JT, Brock CD, Glor RE, Challenger W. GEIGER: investigating evolutionary radiations. Bioinformatics (Oxford, England). 24: 129-31. PMID 18006550 DOI: 10.1093/Bioinformatics/Btm538  0.532
2008 Weir JT, Schluter D. Response to comment on "The latitudinal gradient in recent speciation and extinction rates of birds and mammals" Science. 319: 901d. DOI: 10.1126/Science.1150828  0.609
2007 Weir JT, Schluter D. The latitudinal gradient in recent speciation and extinction rates of birds and mammals. Science (New York, N.Y.). 315: 1574-6. PMID 17363673 DOI: 10.1126/Science.1135590  0.702
2006 Weir JT. Divergent timing and patterns of species accumulation in lowland and highland neotropical birds. Evolution; International Journal of Organic Evolution. 60: 842-55. PMID 16739464 DOI: 10.1111/J.0014-3820.2006.Tb01161.X  0.466
2004 Weir JT, Schluter D. Ice sheets promote speciation in boreal birds. Proceedings. Biological Sciences / the Royal Society. 271: 1881-7. PMID 15347509 DOI: 10.1098/Rspb.2004.2803  0.639
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