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Matthias Benoit - Publications

Affiliations: 
Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 
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17/23 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 He J, Alonge M, Ramakrishnan S, Benoit M, Soyk S, Reem NT, Hendelman A, Van Eck J, Schatz MC, Lippman ZB. Establishing Physalis as a Solanaceae model system enables genetic reevaluation of the inflated calyx syndrome. The Plant Cell. PMID 36268892 DOI: 10.1093/plcell/koac305  0.683
2021 Benoit M, Drost HG. A Predictive Approach to Infer the Activity and Natural Variation of Retrotransposon Families in Plants. Methods in Molecular Biology (Clifton, N.J.). 2250: 1-14. PMID 33900588 DOI: 10.1007/978-1-0716-1134-0_1  0.773
2021 Wang X, Aguirre L, Rodríguez-Leal D, Hendelman A, Benoit M, Lippman ZB. Dissecting cis-regulatory control of quantitative trait variation in a plant stem cell circuit. Nature Plants. 7: 419-427. PMID 33846596 DOI: 10.1038/s41477-021-00898-x  0.696
2020 Soyk S, Benoit M, Lippman ZB. New Horizons for Dissecting Epistasis in Crop Quantitative Trait Variation. Annual Review of Genetics. PMID 32870731 DOI: 10.1146/Annurev-Genet-050720-122916  0.713
2020 Benoit M. The Great Escape: How a Plant DNA Virus Hijacks an Imprinted Host Gene to Avoid Silencing. The Plant Cell. 32: 3051-3052. PMID 32796120 DOI: 10.1105/Tpc.20.00631  0.402
2020 Benoit M. In the Transcripts: Long-Read Transcriptomics Enables a Novel Type of Transposable Element Annotation in Plants. The Plant Cell. 32: 2661-2662. PMID 32665309 DOI: 10.1105/Tpc.20.00523  0.592
2020 Alonge M, Wang X, Benoit M, Soyk S, Pereira L, Zhang L, Suresh H, Ramakrishnan S, Maumus F, Ciren D, Levy Y, Harel TH, Shalev-Schlosser G, Amsellem Z, Razifard H, et al. Major Impacts of Widespread Structural Variation on Gene Expression and Crop Improvement in Tomato. Cell. PMID 32553272 DOI: 10.1016/J.Cell.2020.05.021  0.74
2020 Benoit M. Shooting for the STARRs: A Modified STARR-seq Assay for Rapid Identification and Evaluation of Plant Regulatory Sequences in Tobacco Leaves The Plant Cell. 32: 2057-2058. PMID 32434853 DOI: 10.1105/Tpc.20.00392  0.52
2020 Benoit M. Glyphosate Resistance Decoded: The Reference Sequence of the Extrachromosomal DNA Replicon in Amaranth. The Plant Cell. 32: 2059-2060. PMID 32354789 DOI: 10.1105/Tpc.20.00339  0.503
2020 Benoit M. On the Importance of Variation: A High-Resolution Map of Copy Number Variants in Arabidopsis. The Plant Cell. 32: 1771-1772. PMID 32265264 DOI: 10.1105/Tpc.20.00257  0.461
2019 Benoit M, Drost HG, Catoni M, Gouil Q, Lopez-Gomollon S, Baulcombe D, Paszkowski J. Environmental and epigenetic regulation of Rider retrotransposons in tomato. Plos Genetics. 15: e1008370. PMID 31525177 DOI: 10.1371/Journal.Pgen.1008370  0.67
2018 Cho J, Benoit M, Catoni M, Drost HG, Brestovitsky A, Oosterbeek M, Paszkowski J. Sensitive detection of pre-integration intermediates of long terminal repeat retrotransposons in crop plants. Nature Plants. PMID 30531940 DOI: 10.1038/S41477-018-0320-9  0.6
2018 Benoit M, Simon L, Desset S, Duc C, Cotterell S, Poulet A, Le Goff S, Tatout C, Probst AV. Replication-coupled histone H3.1 deposition determines nucleosome composition and heterochromatin dynamics during Arabidopsis seedling development. The New Phytologist. PMID 29897636 DOI: 10.1111/Nph.15248  0.359
2017 Duc C, Benoit M, Détourné G, Simon L, Poulet A, Jung M, Veluchamy A, Latrasse D, Le Goff S, Cotterell S, Tatout C, Benhamed M, Probst AV. Arabidopsis ATRX Modulates H3.3 Occupancy and Fine-Tunes Gene Expression. The Plant Cell. PMID 28684426 DOI: 10.1105/Tpc.16.00877  0.377
2017 Poulet A, Duc C, Voisin M, Desset S, Tutois S, Vanrobays E, Benoit M, Evans DE, Probst AV, Tatout C. The LINC complex contributes to heterochromatin organisation and transcriptional gene silencing in plants. Journal of Cell Science. PMID 28049722 DOI: 10.1242/Jcs.194712  0.493
2015 Duc C, Benoit M, Le Goff S, Simon L, Poulet A, Cotterell S, Tatout C, Probst AV. The histone chaperone complex HIR maintains nucleosome occupancy and counterbalances impaired histone deposition in CAF-1 complex mutants. The Plant Journal : For Cell and Molecular Biology. 81: 707-22. PMID 25600486 DOI: 10.1111/Tpj.12758  0.379
2013 Benoit M, Layat E, Tourmente S, Probst AV. Heterochromatin dynamics during developmental transitions in Arabidopsis - a focus on ribosomal DNA loci. Gene. 526: 39-45. PMID 23410919 DOI: 10.1016/J.Gene.2013.01.060  0.419
Low-probability matches (unlikely to be authored by this person)
2022 Benoit M. Four to the floor: Active DNA demethylation defines somatic epigenetic patterns and impacts quantitative traits. The Plant Cell. 34: 1149-1150. PMID 35234918 DOI: 10.1093/plcell/koac003  0.249
2020 Benoit M. Slice and Dice: DCL2 Mediates the Production of 22-Nucleotide siRNAs that Influence Trait Variation in Soybean. The Plant Cell. 32: 3646-3647. PMID 33093146 DOI: 10.1105/tpc.20.00884  0.207
2022 Benoit M. Hot 'n cold: Applying the cis-regulatory code to predict heat and cold stress response in maize. The Plant Cell. 34: 497-498. PMID 35226744 DOI: 10.1093/plcell/koab269  0.133
2022 Benoit M. The right dose: molecular compensation maintains rRNA homeostasis upon reduction of ribosomal gene dosage in Arabidopsis. The Plant Cell. 33: 1089-1090. PMID 35234967 DOI: 10.1093/plcell/koab019  0.127
2021 Benoit M. The right dose: molecular compensation maintains rRNA homeostasis upon reduction of ribosomal gene dosage in Arabidopsis The Plant Cell. 33: 1089-1090. DOI: 10.1093/PLCELL/KOAB019  0.127
2022 Benoit M. From non-self to self: stepwise mutations in transcription factors promote the transition to self-pollination in tomato. The Plant Cell. 33: 3183-3184. PMID 35233598 DOI: 10.1093/plcell/koab200  0.091
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