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Trevor Hodkinson - Publications

Affiliations: 
Trinity College Dublin, the University of Dublin 
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34 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Pornpongrungrueng P, Parnell JA, Hodkinson TR, Chantaranothai P. Phyllanthus kaweesakii (Phyllanthaceae), a new species from Thailand Botany. 95: 567-577. DOI: 10.1139/CJB-2016-0298  0.334
2015 Murphy BR, Martin Nieto L, Doohan FM, Hodkinson TR. Profundae diversitas: the uncharted genetic diversity in a newly studied group of fungal root endophytes. Mycology. 6: 139-150. PMID 30151322 DOI: 10.1080/21501203.2015.1070213  0.318
2014 Estep MC, McKain MR, Vela Diaz D, Zhong J, Hodge JG, Hodkinson TR, Layton DJ, Malcomber ST, Pasquet R, Kellogg EA. Allopolyploidy, diversification, and the Miocene grassland expansion. Proceedings of the National Academy of Sciences of the United States of America. 111: 15149-54. PMID 25288748 DOI: 10.1073/Pnas.1404177111  0.305
2013 Christin PA, Osborne CP, Chatelet DS, Columbus JT, Besnard G, Hodkinson TR, Garrison LM, Vorontsova MS, Edwards EJ. Anatomical enablers and the evolution of C4 photosynthesis in grasses. Proceedings of the National Academy of Sciences of the United States of America. 110: 1381-6. PMID 23267116 DOI: 10.1073/Pnas.1216777110  0.61
2012 Aliscioni S, Bell HL, Besnard G, Christin PA, Columbus JT, Duvall MR, Edwards EJ, Giussani L, Hasenstab-Lehman K, Hilu KW, Hodkinson TR, Ingram AL, Kellogg EA, Mashayekhi S, Morrone O, et al. New grass phylogeny resolves deep evolutionary relationships and discovers C 4 origins New Phytologist. 193: 304-312. PMID 22115274 DOI: 10.1111/j.1469-8137.2011.03972.x  0.586
2011 Teerawatananon A, Jacobs S, Hodkinson T. Phylogenetics of Panicoideae (Poaceae) based on chloroplast and nuclear DNA sequences Telopea. 13: 115-142. DOI: 10.7751/telopea20116009  0.315
2010 Bouchenak-Khelladi Y, Verboom GA, Savolainen V, Hodkinson TR. Biogeography of the grasses (Poaceae): a phylogenetic approach to reveal evolutionary history in geographical space and geological time Botanical Journal of the Linnean Society. 162: 543-557. DOI: 10.1111/J.1095-8339.2010.01041.X  0.66
2010 Hodkinson TR, Ní Chonghaile G, Sungkaew S, Chase MW, Salamin N, Stapleton CMA. Phylogenetic analyses of plastid and nuclear DNA sequences indicate a rapid late Miocene radiation of the temperate bamboo tribe Arundinarieae (Poaceae, Bambusoideae) Plant Ecology and Diversity. 3: 109-120. DOI: 10.1080/17550874.2010.521524  0.62
2009 Sungkaew S, Stapleton CM, Salamin N, Hodkinson TR. Non-monophyly of the woody bamboos (Bambuseae; Poaceae): a multi-gene region phylogenetic analysis of Bambusoideae s.s. Journal of Plant Research. 122: 95-108. PMID 19018609 DOI: 10.1007/S10265-008-0192-6  0.603
2009 Sungkaew S, Stapleton CM, Salamin N, Hodkinson TR. Non-monophyly of the woody bamboos (Bambuseae; Poaceae): a multi-gene region phylogenetic analysis of Bambusoideae s.s. Journal of Plant Research. 122: 95-108. PMID 19018609 DOI: 10.1007/S10265-008-0192-6  0.603
2009 Bouchenak-Khelladi Y, Verboom GA, Hodkinson TR, Salamin N, Francois O, Ní Chonghaile G, Savolainen V. The origins and diversification of C4 grasses and savanna-adapted ungulates Global Change Biology. 15: 2397-2417. DOI: 10.1111/J.1365-2486.2009.01860.X  0.677
2008 Bouchenak-Khelladi Y, Salamin N, Savolainen V, Forest F, Bank Mv, Chase MW, Hodkinson TR. Large multi-gene phylogenetic trees of the grasses (Poaceae): progress towards complete tribal and generic level sampling. Molecular Phylogenetics and Evolution. 47: 488-505. PMID 18358746 DOI: 10.1016/J.Ympev.2008.01.035  0.724
2008 Bouchenak-Khelladi Y, Salamin N, Savolainen V, Forest F, Bank Mv, Chase MW, Hodkinson TR. Large multi-gene phylogenetic trees of the grasses (Poaceae): progress towards complete tribal and generic level sampling. Molecular Phylogenetics and Evolution. 47: 488-505. PMID 18358746 DOI: 10.1016/J.Ympev.2008.01.035  0.724
2008 Christin PA, Besnard G, Samaritani E, Duvall MR, Hodkinson TR, Savolainen V, Salamin N. Oligocene CO2 decline promoted C4 photosynthesis in grasses. Current Biology : Cb. 18: 37-43. PMID 18160293 DOI: 10.1016/J.Cub.2007.11.058  0.707
2007 Hodkinson TR, Waldren S, Parnell JA, Kelleher CT, Salamin K, Salamin N. DNA banking for plant breeding, biotechnology and biodiversity evaluation. Journal of Plant Research. 120: 17-29. PMID 17273892 DOI: 10.1007/S10265-006-0059-7  0.555
2007 Hodkinson TR, Waldren S, Parnell JA, Kelleher CT, Salamin K, Salamin N. DNA banking for plant breeding, biotechnology and biodiversity evaluation. Journal of Plant Research. 120: 17-29. PMID 17273892 DOI: 10.1007/S10265-006-0059-7  0.555
2007 Hodkinson TR, Salamin N, Chase MW, Bouchenak-Khelladi Y, Renvoize SA, Savolainen V. Large Trees, Supertrees, and Diversification of the Grass Family Aliso. 23: 248-258. DOI: 10.5642/Aliso.20072301.19  0.702
2007 Simpson D, Muasya M, Alves M, Bruhl J, Dhooge S, Chase M, Furness C, Ghamkhar K, Goetghebeur P, Hodkinson T, Marchant A, Reznicek A, Nieuwborg R, Roalson E, Smets E, et al. Phylogeny of Cyperaceae Based on DNA Sequence Data–a New rbcL Analysis Aliso. 23: 72-83. DOI: 10.5642/Aliso.20072301.09  0.397
2007 Jones E, Simpson DA, Hodkinson TR, Chase MW, Parnell JAN. The Juncaceae-Cyperaceae Interface : A Combined Plastid Sequence Analysis Aliso. 23: 55-61. DOI: 10.5642/Aliso.20072301.07  0.375
2006 Flannery ML, Mitchell FJ, Coyne S, Kavanagh TA, Burke JI, Salamin N, Dowding P, Hodkinson TR. Plastid genome characterisation in Brassica and Brassicaceae using a new set of nine SSRs. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 113: 1221-31. PMID 16909279 DOI: 10.1007/S00122-006-0377-0  0.55
2006 Carolan JC, Hook IL, Chase MW, Kadereit JW, Hodkinson TR. Phylogenetics of Papaver and related genera based on DNA sequences from ITS nuclear ribosomal DNA and plastid trnL intron and trnL-F intergenic spacers. Annals of Botany. 98: 141-55. PMID 16675606 DOI: 10.1093/Aob/Mcl079  0.346
2006 Carolan JC, Hook IL, Chase MW, Kadereit JW, Hodkinson TR. Phylogenetics of Papaver and related genera based on DNA sequences from ITS nuclear ribosomal DNA and plastid trnL intron and trnL-F intergenic spacers. Annals of Botany. 98: 141-55. PMID 16675606 DOI: 10.1093/Aob/Mcl079  0.346
2006 Mcgrath S, Hodkinson TR, Salamin N, Barth S. Development and testing of novel chloroplast microsatellite markers for Lolium perenne and other grasses (Poaceae) from de novo sequencing and in silico sequences Molecular Ecology Notes. 6: 449-452. DOI: 10.1111/J.1471-8286.2006.01267.X  0.539
2005 Salamin N, Hodkinson TR, Savolainen Coates V. Towards building the tree of life: a simulation study for all angiosperm genera. Systematic Biology. 54: 183-96. PMID 16012091 DOI: 10.1080/10635150590923254  0.588
2005 Salamin N, Hodkinson TR, Savolainen Coates V. Towards building the tree of life: a simulation study for all angiosperm genera. Systematic Biology. 54: 183-96. PMID 16012091 DOI: 10.1080/10635150590923254  0.588
2003 Simpson DA, Furness CA, Hodkinson TR, Muasya AM, Chase MW. Phylogenetic relationships in Cyperaceae subfamily Mapanioideae inferred from pollen and plastid DNA sequence data. American Journal of Botany. 90: 1071-86. PMID 21659207 DOI: 10.3732/Ajb.90.7.1071  0.386
2003 Simpson DA, Furness CA, Hodkinson TR, Muasya AM, Chase MW. Phylogenetic relationships in Cyperaceae subfamily Mapanioideae inferred from pollen and plastid DNA sequence data. American Journal of Botany. 90: 1071-86. PMID 21659207 DOI: 10.3732/Ajb.90.7.1071  0.386
2003 Salamin N, Chase MW, Hodkinson TR, Savolainen V. Assessing internal support with large phylogenetic DNA matrices. Molecular Phylogenetics and Evolution. 27: 528-39. PMID 12742757 DOI: 10.1016/S1055-7903(03)00011-3  0.672
2003 Salamin N, Chase MW, Hodkinson TR, Savolainen V. Assessing internal support with large phylogenetic DNA matrices. Molecular Phylogenetics and Evolution. 27: 528-39. PMID 12742757 DOI: 10.1016/S1055-7903(03)00011-3  0.672
2002 Hodkinson TR, Chase MW, Lledó MD, Salamin N, Renvoize SA. Phylogenetics of Miscanthus, Saccharum and related genera (Saccharinae, Andropogoneae, Poaceae) based on DNA sequences from ITS nuclear ribosomal DNA and plastid trnLintron and trnL-F intergenic spacers. Journal of Plant Research. 115: 381-92. PMID 12579363 DOI: 10.1007/S10265-002-0049-3  0.608
2002 Hodkinson TR, Chase MW, Lledó MD, Salamin N, Renvoize SA. Phylogenetics of Miscanthus, Saccharum and related genera (Saccharinae, Andropogoneae, Poaceae) based on DNA sequences from ITS nuclear ribosomal DNA and plastid trnLintron and trnL-F intergenic spacers. Journal of Plant Research. 115: 381-92. PMID 12579363 DOI: 10.1007/S10265-002-0049-3  0.608
2002 Salamin N, Hodkinson TR, Savolainen V. Building supertrees: an empirical assessment using the grass family (Poaceae). Systematic Biology. 51: 136-50. PMID 11943096 DOI: 10.1080/106351502753475916  0.699
2002 Salamin N, Hodkinson TR, Savolainen V. Building supertrees: an empirical assessment using the grass family (Poaceae). Systematic Biology. 51: 136-50. PMID 11943096 DOI: 10.1080/106351502753475916  0.699
2000 Hodkinson TR, Renvoize SA, Chonghaile GN, Stapleton CM, Chase MW. A Comparison of ITS Nuclear rDNA Sequence Data and AFLP Markers for Phylogenetic Studies in Phyllostachys (Bambusoideae, Poaceae) Journal of Plant Research. 113: 259-269. DOI: 10.1007/Pl00013936  0.407
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