John T. Lovell - Publications

University of Texas at Austin, Austin, Texas, U.S.A. 
Ecological Genetics

38 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Lovell JT, Bentley NB, Bhattarai G, Jenkins JW, Sreedasyam A, Alarcon Y, Bock C, Boston LB, Carlson J, Cervantes K, Clermont K, Duke S, Krom N, Kubenka K, Mamidi S, et al. Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding. Nature Communications. 12: 4125. PMID 34226565 DOI: 10.1038/s41467-021-24328-w  1
2021 Carey SB, Jenkins J, Lovell JT, Maumus F, Sreedasyam A, Payton AC, Shu S, Tiley GP, Fernandez-Pozo N, Healey A, Barry K, Chen C, Wang M, Lipzen A, Daum C, et al. Gene-rich UV sex chromosomes harbor conserved regulators of sexual development. Science Advances. 7. PMID 34193417 DOI: 10.1126/sciadv.abh2488  1
2021 Li H, Hu X, Lovell JT, Grabowski PP, Mamidi S, Chen C, Amirebrahimi M, Kahanda I, Mumey B, Barry K, Kudrna D, Schmutz J, Lachowiec J, Lu C. Genetic dissection of natural variation in oilseed traits of camelina by whole-genome resequencing and QTL mapping. The Plant Genome. e20110. PMID 34106529 DOI: 10.1002/tpg2.20110  1
2021 Healey AL, Shepherd M, King GJ, Butler JB, Freeman JS, Lee DJ, Potts BM, Silva-Junior OB, Baten A, Jenkins J, Shu S, Lovell JT, Sreedasyam A, Grimwood J, Furtado A, et al. Pests, diseases, and aridity have shaped the genome of Corymbia citriodora. Communications Biology. 4: 537. PMID 33972666 DOI: 10.1038/s42003-021-02009-0  1
2021 Choi JY, Abdulkina LR, Yin J, Chastukhina IB, Lovell JT, Agabekian IA, Young PG, Razzaque S, Shippen DE, Juenger TE, Shakirov EV, Purugganan MD. Natural variation in plant telomere length is associated with flowering time. The Plant Cell. PMID 33580702 DOI: 10.1093/plcell/koab022  1
2021 Lovell JT, MacQueen AH, Mamidi S, Bonnette J, Jenkins J, Napier JD, Sreedasyam A, Healey A, Session A, Shu S, Barry K, Bonos S, Boston L, Daum C, Deshpande S, et al. Genomic mechanisms of climate adaptation in polyploid bioenergy switchgrass. Nature. PMID 33505029 DOI: 10.1038/s41586-020-03127-1  1
2020 Mamidi S, Healey A, Huang P, Grimwood J, Jenkins J, Barry K, Sreedasyam A, Shu S, Lovell JT, Feldman M, Wu J, Yu Y, Chen C, Johnson J, Sakakibara H, et al. A genome resource for green millet Setaria viridis enables discovery of agronomically valuable loci. Nature Biotechnology. 38: 1203-1210. PMID 33020633 DOI: 10.1038/s41587-020-0681-2  1
2020 Bragg J, Tomasi P, Zhang L, Williams T, Wood D, Lovell JT, Healey A, Schmutz J, Bonnette JE, Cheng P, Chanbusarakum L, Juenger T, Tobias CM. Environmentally responsive QTL controlling surface wax load in switchgrass. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 32803378 DOI: 10.1007/S00122-020-03659-0  1
2020 Chen ZJ, Sreedasyam A, Ando A, Song Q, De Santiago LM, Hulse-Kemp AM, Ding M, Ye W, Kirkbride RC, Jenkins J, Plott C, Lovell J, Lin YM, Vaughn R, Liu B, et al. Genomic diversifications of five Gossypium allopolyploid species and their impact on cotton improvement. Nature Genetics. PMID 32313247 DOI: 10.1038/S41588-020-0614-5  1
2019 Abdulkina LR, Kobayashi C, Lovell JT, Chastukhina IB, Aklilu BB, Agabekian IA, Suescún AV, Valeeva LR, Nyamsuren C, Aglyamova GV, Sharipova MR, Shippen DE, Juenger TE, Shakirov EV. Components of the ribosome biogenesis pathway underlie establishment of telomere length set point in Arabidopsis. Nature Communications. 10: 5479. PMID 31792215 DOI: 10.1038/S41467-019-13448-Z  1
2019 Muchlinski A, Chen X, Lovell JT, Köllner TG, Pelot KA, Zerbe P, Ruggiero M, Callaway L, Laliberte S, Chen F, Tholl D. Biosynthesis and Emission of Stress-Induced Volatile Terpenes in Roots and Leaves of Switchgrass ( L.). Frontiers in Plant Science. 10: 1144. PMID 31608090 DOI: 10.3389/Fpls.2019.01144  0.01
2019 Wang B, Mojica JP, Perera N, Lee CR, Lovell JT, Sharma A, Adam C, Lipzen A, Barry K, Rokhsar DS, Schmutz J, Mitchell-Olds T. Correction to: Ancient polymorphisms contribute to genome-wide variation by long-term balancing selection and divergent sorting in Boechera stricta. Genome Biology. 20: 161. PMID 31399118 DOI: 10.1186/s13059-019-1781-5  1
2019 Wang B, Mojica JP, Perera N, Lee CR, Lovell JT, Sharma A, Adam C, Lipzen A, Barry K, Rokhsar DS, Schmutz J, Mitchell-Olds T. Ancient polymorphisms contribute to genome-wide variation by long-term balancing selection and divergent sorting in Boechera stricta. Genome Biology. 20: 126. PMID 31227026 DOI: 10.1186/S13059-019-1729-9  1
2019 Lowry DB, Lovell JT, Zhang L, Bonnette J, Fay PA, Mitchell RB, Lloyd-Reilley J, Boe AR, Wu Y, Rouquette FM, Wynia RL, Weng X, Behrman KD, Healey A, Barry K, et al. QTL × environment interactions underlie adaptive divergence in switchgrass across a large latitudinal gradient. Proceedings of the National Academy of Sciences of the United States of America. PMID 31182579 DOI: 10.1073/Pnas.1821543116  1
2019 Khasanova A, Lovell JT, Bonnette J, Weng X, Jenkins J, Yoshinaga Y, Schmutz J, Juenger TE. The Genetic Architecture of Shoot and Root Trait Divergence Between Mesic and Xeric Ecotypes of a Perennial Grass. Frontiers in Plant Science. 10: 366. PMID 31019518 DOI: 10.3389/Fpls.2019.00366  1
2019 Weng X, Lovell JT, Schwartz SL, Cheng C, Haque T, Zhang L, Razzaque S, Juenger TE. Complex interactions between day-length and diurnal patterns of gene expression drive photoperiodic responses in a perennial C grass. Plant, Cell & Environment. PMID 30847928 DOI: 10.1111/Pce.13546  1
2018 Lovell JT, Jenkins J, Lowry DB, Mamidi S, Sreedasyam A, Weng X, Barry K, Bonnette J, Campitelli B, Daum C, Gordon SP, Gould BA, Khasanova A, Lipzen A, MacQueen A, et al. The genomic landscape of molecular responses to natural drought stress in Panicum hallii. Nature Communications. 9: 5213. PMID 30523281 DOI: 10.1038/S41467-018-07669-X  1
2018 Monroe JG, Powell T, Price N, Mullen JL, Howard A, Evans K, Lovell JT, McKay JK. Drought adaptation in by extensive genetic loss-of-function. Elife. 7. PMID 30520727 DOI: 10.7554/Elife.41038  1
2018 Milano ER, Payne CE, Wolfrum E, Lovell J, Jenkins J, Schmutz J, Juenger TE. Quantitative trait loci for cell wall composition traits measured using near-infrared spectroscopy in the model C4 perennial grass. Biotechnology For Biofuels. 11: 25. PMID 29434668 DOI: 10.1186/S13068-018-1033-Z  1
2018 Monroe JG, Powell T, Price N, Mullen JL, Howard A, Evans K, Lovell JT, McKay JK. Author response: Drought adaptation in Arabidopsis thaliana by extensive genetic loss-of-function Elife. DOI: 10.7554/Elife.41038.021  1
2017 Monroe JG, Allen ZA, Tanger P, Mullen JL, Lovell JT, Moyers BT, Whitley D, McKay JK. TSPmap, a tool making use of traveling salesperson problem solvers in the efficient and accurate construction of high-density genetic linkage maps. Biodata Mining. 10: 38. PMID 29270228 DOI: 10.1186/S13040-017-0158-0  1
2017 Campitelli BE, Kenney AM, Hopkins R, Soule J, Lovell JT, Juenger TE. Genetic mapping reveals an anthocyanin biosynthesis pathway gene potentially influencing evolutionary divergence between two subspecies of scarlet gilia (Ipomopsis aggregata). Molecular Biology and Evolution. PMID 29253197 DOI: 10.1093/Molbev/Msx318  1
2017 Tanger P, Klassen S, Mojica JP, Lovell JT, Moyers BT, Baraoidan M, Naredo ME, McNally KL, Poland J, Bush DR, Leung H, Leach JE, McKay JK. Field-based high throughput phenotyping rapidly identifies genomic regions controlling yield components in rice. Scientific Reports. 7: 42839. PMID 28220807 DOI: 10.1038/Srep42839  1
2017 Lovell JT, Williamson RJ, Wright SI, McKay JK, Sharbel TF. Mutation accumulation in an asexual relative of Arabidopsis. Plos Genetics. 13: e1006550. PMID 28068346 DOI: 10.1371/Journal.Pgen.1006550  0.96
2016 Mojica JP, Mullen J, Lovell JT, Monroe JG, Paul JR, Oakley CG, McKay JK. Genetics of water use physiology in locally adapted Arabidopsis thaliana. Plant Science : An International Journal of Experimental Plant Biology. 251: 12-22. PMID 27593459 DOI: 10.1016/J.Plantsci.2016.03.015  1
2016 Lovell JT, Shakirov EV, Schwartz S, Lowry DB, Aspinwall MJ, Taylor SH, Bonnette J, Palacio-Mejia JD, Hawkes CV, Fay PA, Juenger T. Promises and challenges of eco-physiological genomics in the field: tests of drought responses in switchgrass. Plant Physiology. PMID 27246097 DOI: 10.1104/Pp.16.00545  1
2016 Lovell JT, Schwartz S, Lowry DB, Shakirov EV, Bonnette JE, Weng X, Wang M, Johnson J, Sreedasyam A, Plott C, Jenkins J, Schmutz J, Juenger TE. Drought responsive gene expression regulatory divergence between upland and lowland ecotypes of a perennial C4 grass. Genome Research. PMID 26953271 DOI: 10.1101/Gr.198135.115  1
2015 Lovell JT, McKay JK. Ecological genetics of range size variation in Boechera spp. (Brassicaceae). Ecology and Evolution. 5: 4962-4975. PMID 26640674 DOI: 10.1002/Ece3.1746  1
2015 Mau M, Lovell JT, Corral JM, Kiefer C, Koch MA, Aliyu OM, Sharbel TF. Hybrid apomicts trapped in the ecological niches of their sexual ancestors. Proceedings of the National Academy of Sciences of the United States of America. 112: E2357-65. PMID 25902513 DOI: 10.1073/Pnas.1423447112  1
2015 Lovell JT, Mullen JL, Lowry DB, Awole K, Richards JH, Sen S, Verslues PE, Juenger TE, McKay JK. Exploiting Differential Gene Expression and Epistasis to Discover Candidate Genes for Drought-Associated QTLs in Arabidopsis thaliana. The Plant Cell. 27: 969-83. PMID 25873386 DOI: 10.1105/Tpc.15.00122  1
2014 Lovell JT, Grogan K, Sharbel TF, McKay JK. Mating system and environmental variation drive patterns of adaptation in Boechera spatifolia (Brassicaceae). Molecular Ecology. 23: 4486-97. PMID 25112786 DOI: 10.1111/Mec.12879  1
2013 Ã…grena J, Oakley CG, McKay JK, Lovell JT, Schemske DW. Genetic mapping of adaptation reveals fitness tradeoffs in Arabidopsis thaliana. Proceedings of the National Academy of Sciences of the United States of America. 110: 21077-82. PMID 24324156 DOI: 10.1073/Pnas.1316773110  1
2013 Lovell JT, Aliyu OM, Mau M, Schranz ME, Koch M, Kiefer C, Song BH, Mitchell-Olds T, Sharbel TF. On the origin and evolution of apomixis in Boechera. Plant Reproduction. 26: 309-15. PMID 23783772 DOI: 10.1007/S00497-013-0218-7  1
2013 Lovell JT, Juenger TE, Michaels SD, Lasky JR, Platt A, Richards JH, Yu X, Easlon HM, Sen S, McKay JK. Pleiotropy of FRIGIDA enhances the potential for multivariate adaptation. Proceedings. Biological Sciences / the Royal Society. 280: 20131043. PMID 23698015 DOI: 10.1098/Rspb.2013.1043  1
2013 Lovell JT, Menges E. Dominant species responses to drought in seasonal wetlands: Evidence from reciprocal transplants across a moisture gradient Journal of the Torrey Botanical Society. 140: 157-169. DOI: 10.3159/Torrey-D-12-00055.1  1
2013 Naujokaitis-Lewis IR, Rico Y, Lovell J, Fortin MJ, Murphy MA. Implications of incomplete networks on estimation of landscape genetic connectivity Conservation Genetics. 14: 287-298. DOI: 10.1007/S10592-012-0385-3  1
2011 Lovell JT. Boechera Summit 2011 Molecular Ecology. 20: 4840-4842. PMID 22059516 DOI: 10.1111/J.1365-294X.2011.05346.X  1
2009 Lovell JT, Gibson J, Heschel MS. Disturbance regime mediates riparian forest dynamics and physiological performance, Arkansas River, CO American Midland Naturalist. 162: 289-304. DOI: 10.1674/0003-0031-162.2.289  1
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