Dong Song - Publications

Affiliations: 
University of Southern California, Los Angeles, CA, United States 
Area:
Neural Modeling and Interface

156 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Roeder BM, She X, Dakos AS, Moore B, Wicks RT, Witcher MR, Couture DE, Laxton AW, Clary HM, Popli G, Liu C, Lee B, Heck C, Nune G, Gong H, ... ... Song D, et al. Developing a hippocampal neural prosthetic to facilitate human memory encoding and recall of stimulus features and categories. Frontiers in Computational Neuroscience. 18: 1263311. PMID 38390007 DOI: 10.3389/fncom.2024.1263311  0.807
2023 Xu H, Scholten K, Li Z, Meng E, Song D. A Library of Polymer-based Microelectrode Array Designs for Recording from the Brain of Different Animal Models. Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual International Conference. 2023: 1-4. PMID 38083000 DOI: 10.1109/EMBC40787.2023.10340804  0.532
2023 Scholten K, Xu H, Lu Z, Jiang W, Ortigoza-Diaz J, Petrossians A, Orler S, Gallonio R, Liu X, Song D, Meng E. Polymer Implantable Electrode Foundry: A shared resource for manufacturing polymer-based microelectrodes for neural interfaces. Biorxiv : the Preprint Server For Biology. PMID 37986740 DOI: 10.1101/2023.11.05.565048  0.466
2023 Thielen B, Xu H, Fujii T, Rangwala SD, Jiang W, Lin M, Kammen A, Liu C, Selvan P, Song D, Mack WJ, Meng E. Making a case for endovascular approaches for neural recording and stimulation. Journal of Neural Engineering. PMID 36603221 DOI: 10.1088/1741-2552/acb086  0.498
2022 Jiang W, Isenhart R, Sutherland R, Lu Z, Xu H, Pace J, Bonaguidi MA, Lee DJ, Liu CY, Song D. Subthreshold repetitive transcranial magnetic stimulation suppresses ketamine-induced poly population spikes in rat sensorimotor cortex. Frontiers in Neuroscience. 16: 998704. PMID 36340783 DOI: 10.3389/fnins.2022.998704  0.532
2022 Roeder BM, Riley MR, She X, Dakos AS, Robinson BS, Moore BJ, Couture DE, Laxton AW, Popli G, Munger Clary HM, Sam M, Heck C, Nune G, Lee B, Liu C, ... ... Song D, et al. Corrigendum: Patterned hippocampal stimulation facilitates memory in patients with a history of head impact and/or brain injury. Frontiers in Human Neuroscience. 16: 1039221. PMID 36277045 DOI: 10.3389/fnhum.2022.1039221  0.782
2022 Xu H, Scholten K, Jiang W, Ortigoza-Diaz JL, Lu Z, Liu X, Meng E, Song D. Acute in vivo Recording with a Generic Parylene Microelectrode Array Implanted with Dip-coating Method into the Rat Brain. Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual International Conference. 2022: 214-217. PMID 36086181 DOI: 10.1109/EMBC48229.2022.9870987  0.469
2022 Roeder BM, Riley MR, She X, Dakos AS, Robinson BS, Moore BJ, Couture DE, Laxton AW, Popli G, Clary HM, Sam M, Heck C, Nune G, Lee B, Liu C, ... ... Song D, et al. Patterned Hippocampal Stimulation Facilitates Memory in Patients With a History of Head Impact and/or Brain Injury. Frontiers in Human Neuroscience. 16: 933401. PMID 35959242 DOI: 10.3389/fnhum.2022.933401  0.787
2022 Wang X, Weltman Hirschberg A, Xu H, Slingsby-Smith Z, Lecomte A, Scholten K, Song D, Meng E. A Parylene Neural Probe Array for Multi-Region Deep Brain Recordings. Journal of Microelectromechanical Systems : a Joint Ieee and Asme Publication On Microstructures, Microactuators, Microsensors, and Microsystems. 29: 499-513. PMID 35663261 DOI: 10.1109/jmems.2020.3000235  0.52
2022 Ammothumkandy A, Ravina K, Wolseley V, Tartt AN, Yu PN, Corona L, Zhang N, Nune G, Kalayjian L, Mann JJ, Rosoklija GB, Arango V, Dwork AJ, Lee B, Smith JAD, ... Song D, et al. Altered adult neurogenesis and gliogenesis in patients with mesial temporal lobe epilepsy. Nature Neuroscience. 25: 493-503. PMID 35383330 DOI: 10.1038/s41593-022-01044-2  0.801
2022 She X, Robinson B, Flynn G, Berger TW, Song D. Accelerating input-output model estimation with parallel computing for testing hippocampal memory prostheses in human. Journal of Neuroscience Methods. 370: 109492. PMID 35104492 DOI: 10.1016/j.jneumeth.2022.109492  0.82
2021 Jiang W, Isenhart R, Kistler N, Lu Z, Xu H, Lee DJ, Liu CY, Song D. Low Intensity Repetitive Transcranial Magnetic Stimulation Modulates Spontaneous Spiking Activities in Rat Cortex. Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual International Conference. 2021: 6318-6321. PMID 34892558 DOI: 10.1109/EMBC46164.2021.9630986  0.535
2021 She X, Berger TW, Song D. A Double-Layer, Multi-Resolution Classification Model for Decoding Spatiotemporal Patterns of Spikes with Small Sample Size. Neural Computation. 1-36. PMID 34758485 DOI: 10.1162/neco_a_01459  0.803
2021 Elyahoodayan S, Jiang W, Lee CD, Shao X, Weiland G, Whalen JJ, Petrossians A, Song D. Stimulation and Recording of the Hippocampus Using the Same Pt-Ir Coated Microelectrodes. Frontiers in Neuroscience. 15: 616063. PMID 33716647 DOI: 10.3389/fnins.2021.616063  0.802
2021 Yu PN, Liu C, Heck CN, Berger TW, Song D. A sparse multiscale nonlinear autoregressive model for seizure prediction. Journal of Neural Engineering. PMID 33470981 DOI: 10.1088/1741-2552/abdd43  0.779
2020 Scholten K, Larson CE, Xu H, Song D, Meng E. A 512-Channel Multi-Layer Polymer-Based Neural Probe Array. Journal of Microelectromechanical Systems : a Joint Ieee and Asme Publication On Microstructures, Microactuators, Microsensors, and Microsystems. 29: 1054-1058. PMID 33746477 DOI: 10.1109/Jmems.2020.2999550  0.504
2020 Moore BJ, Berger T, Song D. Validation of a Convolutional Neural Network Model for Spike Transformation Using a Generalized Linear Model. Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual International Conference. 2020: 3236-3239. PMID 33018694 DOI: 10.1109/EMBC44109.2020.9176458  0.672
2020 She X, Robinson BS, Berger TW, Song D. Accelerating Estimation of a Multi-Input Multi-Output Model of the Hippocampus with a Parallel Computing Strategy. Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual International Conference. 2020: 2479-2482. PMID 33018509 DOI: 10.1109/EMBC44109.2020.9175490  0.825
2020 Bingham CS, Paknahad J, Girard CBC, Loizos K, Bouteiller JC, Song D, Lazzi G, Berger TW. Admittance Method for Estimating Local Field Potentials Generated in a Multi-Scale Neuron Model of the Hippocampus. Frontiers in Computational Neuroscience. 14: 72. PMID 32848687 DOI: 10.3389/Fncom.2020.00072  0.812
2020 Elyahoodayan S, Larson C, Cobo A, Meng E, Song D. Corrigendum to "Acute in vivo testing of a polymer cuff electrode with integrated microfluidic channels for stimulation, recording, and drug delivery on rat sciatic nerve" [J. Neurosci. Methods 336 (April) (2020) 108634]. Journal of Neuroscience Methods. 108696. PMID 32265070 DOI: 10.1016/J.Jneumeth.2020.108696  0.77
2020 Bingham CS, Mergenthal A, Bouteiller JC, Song D, Lazzi G, Berger TW. ROOTS: An Algorithm to Generate Biologically Realistic Cortical Axons and an Application to Electroceutical Modeling. Frontiers in Computational Neuroscience. 14: 13. PMID 32153379 DOI: 10.3389/Fncom.2020.00013  0.803
2020 Elyahoodayan S, Larson C, Cobo AM, Meng E, Song D. Acute In Vivo Testing of a Polymer Cuff Electrode with Integrated Microfluidic Channels for Stimulation, Recording, and Drug Delivery on Rat Sciatic Nerve. Journal of Neuroscience Methods. 108634. PMID 32068010 DOI: 10.1016/J.Jneumeth.2020.108634  0.765
2020 Chowdhury MH, Elyahoodayan S, Song D, Cheung  RCC. An FPGA-Based Neuron Activity Extraction Unit for a Wireless Neural Interface Electronics. 9: 1834. DOI: 10.3390/electronics9111834  0.8
2020 Wang X, Hirschberg AW, Xu H, Slingsby-Smith Z, Lecomte A, Scholten K, Song D, Meng E. A Parylene Neural Probe Array for Multi-Region Deep Brain Recordings Ieee\/Asme Journal of Microelectromechanical Systems. 29: 499-513. DOI: 10.1109/Jmems.2020.3000235  0.52
2019 Elyahoodayan S, Jiang W, Xu H, Song D. A Multi-Channel Asynchronous Neurostimulator With Artifact Suppression for Neural Code-Based Stimulations. Frontiers in Neuroscience. 13: 1011. PMID 31611764 DOI: 10.3389/fnins.2019.01011  0.803
2019 Geng K, Shin DC, Song D, Hampson RE, Deadwyler SA, Berger TW, Marmarelis VZ. Multi-Input, Multi-Output Neuronal Mode Network Approach to Modeling the Encoding Dynamics and Functional Connectivity of Neural Systems. Neural Computation. 1-29. PMID 31113305 DOI: 10.1162/Neco_A_01204  0.678
2019 Yu GJ, Bouteiller JC, Song D, Berger TW. Axonal Anatomy Optimizes Spatial Encoding in the Rat Entorhinal-Dentate System: A Computational Study. Ieee Transactions On Bio-Medical Engineering. PMID 30676938 DOI: 10.1109/Tbme.2019.2894410  0.779
2019 Cobo AM, Larson CE, Scholten K, Miranda JA, Elyahoodayan S, Song D, Pikov V, Meng E. Parylene-Based Cuff Electrode With Integrated Microfluidics for Peripheral Nerve Recording, Stimulation, and Drug Delivery Journal of Microelectromechanical Systems. 28: 36-49. DOI: 10.1109/Jmems.2018.2881908  0.779
2018 Yu GJ, Bouteiller JC, Song D, Berger TW. Decoding Position to Analyze Spatial Information Encoding in a Large-Scale Neuronal Network Model of Rat Dentate Gyrus. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2018: 6137-6140. PMID 30441735 DOI: 10.1109/EMBC.2018.8513576  0.798
2018 Hu EY, Yu G, Song D, Jean-Marie Bouteiller C, Theodore Berger W. Modeling Nonlinear Synaptic Dynamics: A Laguerre-Volterra Network Framework for Improved Computational Efficiency in Large Scale Simulations. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2018: 6129-6132. PMID 30441733 DOI: 10.1109/EMBC.2018.8513616  0.763
2018 Xu H, Hirschberg AW, Scholten K, Meng E, Berger TW, Song D. Application of Parylene-Based Flexible Multi-Electrode Array for Recording From Subcortical Brain Regions From Behaving Rats. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2018: 4599-4602. PMID 30441376 DOI: 10.1109/EMBC.2018.8513202  0.71
2018 Elyahoodayan S, Berger TW, Song D. A Closed-Loop Multi-Channel Asynchronous Neurostimulator to Mimic Neural Code for Cognitive Prosthesis. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2018: 1388-1391. PMID 30440651 DOI: 10.1109/EMBC.2018.8512497  0.788
2018 Bingham CS, Bouteiller JC, Song D, Berger TW. Graph-Based Models of Cortical Axons for the Prediction of Neuronal Response to Extracellular Electrical Stimulation. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2018: 1380-1383. PMID 30440649 DOI: 10.1109/EMBC.2018.8512503  0.814
2018 Hu E, Mergenthal A, Bingham CS, Song D, Bouteiller JM, Berger TW. A Glutamatergic Spine Model to Enable Multi-Scale Modeling of Nonlinear Calcium Dynamics. Frontiers in Computational Neuroscience. 12: 58. PMID 30100870 DOI: 10.3389/Fncom.2018.00058  0.809
2018 Bingham CS, Loizos K, Yu GJ, Gilbert A, Bouteiller JC, Song D, Lazzi G, Berger TW. Model-Based Analysis of Electrode Placement and Pulse Amplitude for Hippocampal Stimulation. Ieee Transactions On Bio-Medical Engineering. PMID 29993519 DOI: 10.1109/Tbme.2018.2791860  0.797
2018 Qiao Z, Han Y, Han X, Xu H, Li WXY, Song D, Berger TW, Cheung RCC. ASIC Implementation of a Nonlinear Dynamical Model for Hippocampal Prosthesis. Neural Computation. 1-28. PMID 29949460 DOI: 10.1162/neco_a_01107  0.652
2018 Hampson RE, Song D, Robinson BS, Fetterhoff D, Dakos AS, Roeder BM, She X, Wicks RT, Witcher MR, Couture DE, Laxton AW, Munger-Clary H, Popli G, Sollman MJ, Whitlow CT, et al. Developing a hippocampal neural prosthetic to facilitate human memory encoding and recall. Journal of Neural Engineering. 15: 036014. PMID 29589592 DOI: 10.1088/1741-2552/Aaaed7  0.783
2018 Sandler RA, Geng K, Song D, Hampson RE, Witcher MR, Deadwyler SA, Berger TW, Marmarelis VZ. Designing Patient-Specific Optimal Neurostimulation Patterns for Seizure Suppression. Neural Computation. 1-29. PMID 29566356 DOI: 10.1162/Neco_A_01075  0.616
2017 Ramirez-Zamora A, Giordano JJ, Gunduz A, Brown P, Sanchez JC, Foote KD, Almeida L, Starr PA, Bronte-Stewart HM, Hu W, McIntyre C, Goodman W, Kumsa D, Grill WM, Walker HC, ... ... Song D, et al. Evolving Applications, Technological Challenges and Future Opportunities in Neuromodulation: Proceedings of the Fifth Annual Deep Brain Stimulation Think Tank. Frontiers in Neuroscience. 11: 734. PMID 29416498 DOI: 10.3389/Fnins.2017.00734  0.581
2017 Geng K, Shin DC, Song D, Hampson RE, Deadwyler SA, Berger TW, Marmarelis VZ. Mechanism-Based and Input-Output Modeling of the Key Neuronal Connections and Signal Transformations in the CA3-CA1 Regions of the Hippocampus. Neural Computation. 1-35. PMID 29064783 DOI: 10.1162/Neco_A_01031  0.686
2017 Xu H, Hirschberg AW, Scholten K, Berger TW, Song D, Meng E. Acute in vivo testing of a conformal polymer microelectrode array for multi-region hippocampal recordings. Journal of Neural Engineering. PMID 29044049 DOI: 10.1088/1741-2552/Aa9451  0.708
2016 Hu EY, Bouteiller JC, Song D, Berger TW, Hu EY, Bouteiller JC, Dong Song, Berger TW, Bouteiller JC, Hu EY, Song D, Berger TW. Development of a detailed model of calcium dynamics at the postsynaptic spine of an excitatory synapse. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2016: 6102-6105. PMID 28227903 DOI: 10.1109/EMBC.2016.7592121  0.595
2016 Xu H, Weltman A, Hsiao MC, Scholten K, Meng E, Berger TW, Song D, Huijing Xu, Weltman A, Min-Chi Hsiao, Scholten K, Meng E, Berger TW, Dong Song, Meng E, ... Song D, et al. A flexible parylene probe for in vivo recordings from multiple subregions of the rat hippocampus. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2016: 2806-2809. PMID 28227102 DOI: 10.1109/EMBC.2016.7591313  0.788
2016 Bingham CS, Loizos K, Yu G, Gilbert A, Bouteiller JM, Song D, Lazzi G, Berger TW, Bingham CS, Loizos K, Gene Yu, Gilbert A, Bouteiller JM, Dong Song, Lazzi G, ... ... Song D, et al. A large-scale detailed neuronal model of electrical stimulation of the dentate gyrus and perforant path as a platform for electrode design and optimization. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2016: 2794-2797. PMID 28227099 DOI: 10.1109/EMBC.2016.7591310  0.817
2016 Yu PN, Naiini SA, Heck CN, Liu CY, Song D, Berger TW, Pen-Ning Yu, Naiini SA, Heck CN, Liu CY, Dong Song, Berger TW, Naiini SA, Liu CY, Yu PN, ... ... Song D, et al. A sparse Laguerre-Volterra autoregressive model for seizure prediction in temporal lobe epilepsy. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2016: 1664-1667. PMID 28226829 DOI: 10.1109/EMBC.2016.7591034  0.62
2016 Robinson BS, Berger TW, Song D, Robinson BS, Berger TW, Dong Song, Robinson BS, Song D, Berger TW. Monte Carlo validation of spike-timing-dependent plasticity identification from spiking activity. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2016: 1624-1627. PMID 28226820 DOI: 10.1109/EMBC.2016.7591024  0.746
2016 Song D, Hampson RE, Robinson BS, Marmarelis VZ, Deadwyler SA, Berger TW, Dong Song, Hampson RE, Robinson BS, Marmarelis VZ, Deadwyler SA, Berger TW, Song D, Hampson RE, Deadwyler SA, et al. Decoding memory features from hippocampal spiking activities using sparse classification models. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2016: 1620-1623. PMID 28226819 DOI: 10.1109/EMBC.2016.7591023  0.734
2016 Hendrickson PJ, Bingham C, Song D, Berger TW, Hendrickson PJ, Bingham C, Dong Song, Berger TW, Hendrickson PJ, Bingham C, Song D, Berger TW. A bi-directional communication paradigm between parallel NEURON and an external non-neuron process. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2016: 1413-1416. PMID 28226769 DOI: 10.1109/EMBC.2016.7590973  0.81
2016 Yu GJ, Song D, Berger TW, Yu GJ, Dong Song, Berger TW, Song D, Yu GJ, Berger TW. Place field detection using grid-based clustering in a large-scale computational model of the rat dentate gyrus. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2016: 1405-1408. PMID 28226767 DOI: 10.1109/EMBC.2016.7590971  0.794
2016 Song D, Robinson B, Hampson R, Marmarelis V, Deadwyler S, Berger T. Sparse Large-Scale Nonlinear Dynamical Modeling of Human Hippocampus for Memory Prostheses. Ieee Transactions On Neural Systems and Rehabilitation Engineering : a Publication of the Ieee Engineering in Medicine and Biology Society. PMID 28113595 DOI: 10.1109/Tnsre.2016.2604423  0.76
2016 Robinson BS, Berger TW, Song D. Identification of Stable Spike-Timing-Dependent Plasticity from Spiking Activity with Generalized Multilinear Modeling. Neural Computation. 1-32. PMID 27557101 DOI: 10.1162/NECO_a_00883  0.78
2016 Deadwyler SA, Hampson RE, Song D, Opris I, Gerhardt GA, Marmarelis VZ, Berger TW. A cognitive prosthesis for memory facilitation by closed-loop functional ensemble stimulation of hippocampal neurons in primate brain. Experimental Neurology. PMID 27233622 DOI: 10.1016/J.Expneurol.2016.05.031  0.665
2016 Li WXY, Cheung RCC, Xin Y, Song D, Berger TW. An FPGA-Based High-Performance Neural Ensemble Spiking Activity Simulator Utilizing Generalized Volterra Kernel and Complexity Analysis Journal of Circuits, Systems and Computers. 25. DOI: 10.1142/S0218126616400041  0.656
2015 Hendrickson PJ, Yu GJ, Song D, Berger TW. Interactions between Inhibitory Interneurons and Excitatory Associational Circuitry in Determining Spatio-Temporal Dynamics of Hippocampal Dentate Granule Cells: A Large-Scale Computational Study. Frontiers in Systems Neuroscience. 9: 155. PMID 26635545 DOI: 10.3389/fnsys.2015.00155  0.814
2015 Opris I, Santos LM, Gerhardt GA, Song D, Berger TW, Hampson RE, Deadwyler SA. Distributed encoding of spatial and object categories in primate hippocampal microcircuits. Frontiers in Neuroscience. 9: 317. PMID 26500473 DOI: 10.3389/Fnins.2015.00317  0.613
2015 Xin Y, Li WX, Zhang Z, Cheung RC, Song D, Berger TW. An Application Specific Instruction Set Processor (ASIP) for Adaptive Filters in Neural Prosthetics. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 12: 1034-47. PMID 26451817 DOI: 10.1109/TCBB.2015.2440248  0.591
2015 Hu EY, Bouteiller JM, Song D, Baudry M, Berger TW. Volterra representation enables modeling of complex synaptic nonlinear dynamics in large-scale simulations. Frontiers in Computational Neuroscience. 9: 112. PMID 26441622 DOI: 10.3389/Fncom.2015.00112  0.667
2015 Sandler RA, Song D, Hampson RE, Deadwyler SA, Berger TW, Marmarelis VZ. Hippocampal closed-loop modeling and implications for seizure stimulation design. Journal of Neural Engineering. 12: 056017. PMID 26355815 DOI: 10.1088/1741-2560/12/5/056017  0.665
2015 Hendrickson P, Yu G, Song D, Berger T. A Million-Plus Neuron Model of the Hippocampal Dentate Gyrus: Critical Role for Topography in Determining Spatio-Temporal Network Dynamics. Ieee Transactions On Bio-Medical Engineering. PMID 26087482 DOI: 10.1109/TBME.2015.2445771  0.824
2015 Sandler RA, Deadwyler SA, Hampson RE, Song D, Berger TW, Marmarelis VZ. System identification of point-process neural systems using probability based Volterra kernels. Journal of Neuroscience Methods. 240: 179-92. PMID 25479231 DOI: 10.1016/J.Jneumeth.2014.11.013  0.65
2015 Song D, Chan RH, Robinson BS, Marmarelis VZ, Opris I, Hampson RE, Deadwyler SA, Berger TW. Identification of functional synaptic plasticity from spiking activities using nonlinear dynamical modeling. Journal of Neuroscience Methods. 244: 123-35. PMID 25280984 DOI: 10.1016/J.Jneumeth.2014.09.023  0.837
2015 Sandler RA, Song D, Hampson RE, Deadwyler SA, Berger TW, Marmarelis VZ. Model-based asessment of an in-vivo predictive relationship from CA1 to CA3 in the rodent hippocampus. Journal of Computational Neuroscience. 38: 89-103. PMID 25260381 DOI: 10.1007/S10827-014-0530-8  0.639
2015 Hsiao MC, Yu PN, Song D, Liu CY, Heck CN, Millett D, Berger TW. An in vitro seizure model from human hippocampal slices using multi-electrode arrays. Journal of Neuroscience Methods. 244: 154-63. PMID 25244953 DOI: 10.1016/J.Jneumeth.2014.09.010  0.785
2015 Ghaderi VS, Song D, Choma J, Berger TW. Nonlinear cognitive signal processing in ultralow-power programmable analog hardware Ieee Transactions On Circuits and Systems Ii: Express Briefs. 62: 124-128. DOI: 10.1109/Tcsii.2014.2387693  0.806
2015 Song D, Hampson RE, Robinson BS, Opris I, Marmarelis VZ, Deadwyler SA, Berger TW. Nonlinear dynamical modeling of human hippocampal CA3-CA1 functional connectivity for memory prostheses International Ieee/Embs Conference On Neural Engineering, Ner. 2015: 316-319. DOI: 10.1109/NER.2015.7146623  0.737
2015 Li WXY, Xin Y, Song D, Berger TW, Cheung RCC. VLSI architecture of a high-performance neural spiking activity simulator based on generalized Volterra kernel Proceedings of the 14th International Symposium On Integrated Circuits, Isic 2014. 272-275. DOI: 10.1109/ISICIR.2014.7029554  0.616
2015 Song D, Hsiao MC, Opris I, Hampson RE, Marmarelis VZ, Gerhardt GA, Deadwyler SA, Berger TW. Hippocampal microcircuits, functional connectivity, and prostheses Recent Advances On the Modular Organization of the Cortex. 385-405. DOI: 10.1007/978-94-017-9900-3_20  0.698
2015 Deadwyler SA, Opris I, Santos LM, Hampson RE, Gerhardt GA, Song D, Marmarelis VZ, Berger TW. Extraction of cortical modularity patterns for neural prosthetics Recent Advances On the Modular Organization of the Cortex. 367-384. DOI: 10.1007/978-94-017-9900-3_19  0.58
2014 Robinson BS, Song D, Berger TW. Generalized Volterra kernel model identification of spike-timing-dependent plasticity from simulated spiking activity. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2014: 6585-8. PMID 25571505 DOI: 10.1109/EMBC.2014.6945137  0.773
2014 Yu G, Song D, Berger TW. Implementation of the excitatory entorhinal-dentate-CA3 topography in a large-scale computational model of the rat hippocampus. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2014: 6581-4. PMID 25571504 DOI: 10.1109/EMBC.2014.6945136  0.81
2014 Li WX, Xin Y, Chan RH, Song D, Berger TW, Cheung RC. Laguerre-Volterra model and architecture for MIMO system identification and output prediction. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2014: 4539-42. PMID 25571001 DOI: 10.1109/EMBC.2014.6944633  0.777
2014 Hu EY, Bouteiller JM, Huang M, Song D, Berger T. A comparison between direct and indirect measurements of neurotransmitter vesicle release dynamics: a computational study. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2014: 1155-8. PMID 25570168 DOI: 10.1109/EMBC.2014.6943800  0.587
2014 Deadwyler SA, Berger TW, Opris I, Song D, Hampson RE. Neurons and networks organizing and sequencing memories. Brain Research. PMID 25553617 DOI: 10.1016/J.Brainres.2014.12.037  0.664
2014 Song D, Harway M, Marmarelis VZ, Hampson RE, Deadwyler SA, Berger TW. Extraction and restoration of hippocampal spatial memories with non-linear dynamical modeling. Frontiers in Systems Neuroscience. 8: 97. PMID 24904318 DOI: 10.3389/Fnsys.2014.00097  0.679
2014 Marmarelis VZ, Shin DC, Song D, Hampson RE, Deadwyler SA, Berger TW. On parsing the neural code in the prefrontal cortex of primates using principal dynamic modes. Journal of Computational Neuroscience. 36: 321-37. PMID 23929124 DOI: 10.1007/S10827-013-0475-3  0.657
2014 Bingham C, Loizos K, Yu G, Hendrickson P, Bouteiller J, Song D, Lazzi G, Berger T. Towards optimizing MEA design, placement, and stimulation patterns using a multi-scale multi-model framework F1000research. 5. DOI: 10.7490/F1000Research.1097276.1  0.783
2014 Sandler R, Song D, Hampson RE, Deadwyler SA, Berger T, Marmarelis V. Probability-based nonlinear modeling of neural dynamical systems with point-process inputs and outputs Bmc Neuroscience. 15. DOI: 10.1186/1471-2202-15-S1-P102  0.659
2014 Xin Y, Li WXY, Cheung RCC, Chan RHM, Yan H, Song D, Berger TW. An FPGA based scalable architecture of a stochastic state point process filter (SSPPF) to track the nonlinear dynamics underlying neural spiking Microelectronics Journal. 45: 690-701. DOI: 10.1016/J.Mejo.2014.03.018  0.633
2013 Deadwyler SA, Berger TW, Sweatt AJ, Song D, Chan RH, Opris I, Gerhardt GA, Marmarelis VZ, Hampson RE. Donor/recipient enhancement of memory in rat hippocampus. Frontiers in Systems Neuroscience. 7: 120. PMID 24421759 DOI: 10.3389/Fnsys.2013.00120  0.789
2013 Hampson RE, Song D, Opris I, Santos LM, Shin DC, Gerhardt GA, Marmarelis VZ, Berger TW, Deadwyler SA. Facilitation of memory encoding in primate hippocampus by a neuroprosthesis that promotes task-specific neural firing. Journal of Neural Engineering. 10: 066013. PMID 24216292 DOI: 10.1088/1741-2560/10/6/066013  0.661
2013 Hendrickson PJ, Yu GJ, Robinson BS, Song D, Berger TW. The contribution of relative activation levels between populations of cells to network activity in a large-scale biologically realistic model of the hippocampus. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2013: 5962-5. PMID 24111097 DOI: 10.1109/EMBC.2013.6610910  0.818
2013 Hampson RE, Fuqua JL, Huettl PF, Opris I, Song D, Shin D, Marmarelis VZ, Berger TW, Gerhardt GA, Deadwyler SA. Conformal ceramic electrodes that record glutamate release and corresponding neural activity in primate prefrontal cortex. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2013: 5954-7. PMID 24111095 DOI: 10.1109/EMBC.2013.6610908  0.592
2013 Yu GJ, Hendrickson PJ, Robinson BS, Song D, Berger TW. The role of topography in the transformation of spatiotemporal patterns by a large-scale, biologically realistic model of the rat dentate gyrus. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2013: 5950-3. PMID 24111094 DOI: 10.1109/EMBC.2013.6610907  0.809
2013 Robinson BS, Song D, Berger TW. Laguerre-Volterra identification of spike-timing-dependent plasticity from spiking activity: a simulation study. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2013: 5578-81. PMID 24111001 DOI: 10.1109/EMBC.2013.6610814  0.746
2013 Bouteiller JM, Hu E, Allam SL, Ghaderi V, Song D, Berger TW. Insights on synaptic paired-pulse response using parametric and non-parametric models. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2013: 1041-4. PMID 24109869 DOI: 10.1109/EMBC.2013.6609682  0.802
2013 Ghaderi VS, Song D, Bouteiller JM, Choma J, Berger TW. A programmable analog subthreshold biomimetic model for bi-directional communication with the brain. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2013: 787-90. PMID 24109805 DOI: 10.1109/EMBC.2013.6609618  0.821
2013 Opris I, Santos L, Gerhardt GA, Song D, Berger TW, Hampson RE, Deadwyler SA. Prefrontal cortical microcircuits bind perception to executive control. Scientific Reports. 3: 2285. PMID 23893262 DOI: 10.1038/Srep02285  0.602
2013 Li WX, Cheung RC, Chan RH, Song D, Berger TW. Real-time prediction of neuronal population spiking activity using FPGA. Ieee Transactions On Biomedical Circuits and Systems. 7: 489-98. PMID 23893208 DOI: 10.1109/Tbcas.2012.2228261  0.796
2013 Song D, Wang H, Tu CY, Marmarelis VZ, Hampson RE, Deadwyler SA, Berger TW. Identification of sparse neural functional connectivity using penalized likelihood estimation and basis functions. Journal of Computational Neuroscience. 35: 335-57. PMID 23674048 DOI: 10.1007/S10827-013-0455-7  0.638
2013 Hsiao MC, Song D, Berger TW. Nonlinear dynamical model based control of in vitro hippocampal output. Frontiers in Neural Circuits. 7: 20. PMID 23429994 DOI: 10.3389/Fncir.2013.00020  0.724
2013 Marmarelis VZ, Shin DC, Song D, Hampson RE, Deadwyler SA, Berger TW. Nonlinear modeling of dynamic interactions within neuronal ensembles using Principal Dynamic Modes. Journal of Computational Neuroscience. 34: 73-87. PMID 23011343 DOI: 10.1007/S10827-012-0407-7  0.681
2013 Song D, Wang H, Marmarelis VZ, Hampson RE, Deadwyler SA, Berger TW. Estimation of Sparse Dynamical Model of Neural Functional Connectivity Using Group Lasso and Laguerre Basis Functions Transactions of Japanese Society For Medical and Biological Engineering. 51. DOI: 10.11239/Jsmbe.51.R-128  0.655
2013 Sandler R, Shin DC, Song D, Hampson RE, Deadwyler SA, Berger TW, Marmarelis VZ. Closed-loop modeling of the hippocampus and design of neurostimulation patterns for suppressing seizures International Ieee/Embs Conference On Neural Engineering, Ner. 1143-1146. DOI: 10.1109/NER.2013.6696140  0.609
2013 Song D, Robinson BS, Chan RHM, Marmarelis VZ, Hampson RE, Deadwyler SA, Berger TW. Identification of functional synaptic plasticity from ensemble spiking activities: A nonlinear dynamical modeling approach International Ieee/Embs Conference On Neural Engineering, Ner. 617-620. DOI: 10.1109/NER.2013.6696010  0.75
2013 Marmarelis VZ, Shin DC, Song D, Hampson RE, Deadwyler SA, Berger TW. Model-based design of optimal neurostimulation in the NHP hippocampus for enhancing behavioral task performance International Ieee/Embs Conference On Neural Engineering, Ner. 476-479. DOI: 10.1109/NER.2013.6695975  0.581
2013 Li WXY, Cheung RCC, Chan RHM, Song D, Berger TW. A reconfigurable architecture for real-time prediction of neural activity Proceedings - Ieee International Symposium On Circuits and Systems. 1869-1872. DOI: 10.1109/ISCAS.2013.6572230  0.581
2013 Li WXY, Chan RHM, Zhang W, Yu C, Song D, Berger TW, Cheung RCC. High-performance computing for neuroinformatics using FPGA High-Performance Computing Using Fpgas. 2147483647: 177-207. DOI: 10.1007/978-1-4614-1791-0_6  0.542
2012 Roach SM, Lu U, Song D, Berger TW. An analysis of the expression locus of long-term potentiation in hippocampal CA1 neurons. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2012: 5510-3. PMID 23367177 DOI: 10.1109/EMBC.2012.6347242  0.811
2012 Hsiao MC, Yu PN, Song D, Liu CY, Heck CN, Millett D, Berger TW. Spatio-temporal inter-ictal activity recorded from human epileptic hippocampal slices. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2012: 5166-9. PMID 23367092 DOI: 10.1109/EMBC.2012.6347157  0.782
2012 Hendrickson PJ, Yu GJ, Robinson BS, Song D, Berger TW. Towards a large-scale biologically realistic model of the hippocampus. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2012: 4595-8. PMID 23366951 DOI: 10.1109/EMBC.2012.6346990  0.82
2012 Li WX, Chan RH, Song D, Berger TW, Cheung RC. A dual mode FPGA design for the hippocampal prosthesis. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2012: 4579-82. PMID 23366947 DOI: 10.1109/EMBC.2012.6346986  0.766
2012 Song D, Opris I, Chan RH, Marmarelis VZ, Hampson RE, Deadwyler SA, Berger TW. Functional connectivity between Layer 2/3 and Layer 5 neurons in prefrontal cortex of nonhuman primates during a delayed match-to-sample task. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2012: 2555-8. PMID 23366446 DOI: 10.1109/EMBC.2012.6346485  0.799
2012 Robinson BS, Yu GJ, Hendrickson PJ, Song D, Berger TW. Implementation of activity-dependent synaptic plasticity rules for a large-scale biologically realistic model of the hippocampus. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2012: 1366-9. PMID 23366153 DOI: 10.1109/EMBC.2012.6346192  0.813
2012 Yu GJ, Robinson BS, Hendrickson PJ, Song D, Berger TW. Implementation of topographically constrained connectivity for a large-scale biologically realistic model of the hippocampus. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2012: 1358-61. PMID 23366151 DOI: 10.1109/EMBC.2012.6346190  0.828
2012 Ghaderi VS, Roach S, Song D, Marmarelis VZ, Choma J, Berger TW. Analog low-power hardware implementation of a Laguerre-Volterra model of intracellular subthreshold neuronal activity. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2012: 767-70. PMID 23366005 DOI: 10.1109/EMBC.2012.6346044  0.835
2012 Marmarelis VZ, Shin DC, Hampson RE, Deadwyler SA, Song D, Berger TW. Design of optimal stimulation patterns for neuronal ensembles based on Volterra-type hierarchical modeling. Journal of Neural Engineering. 9: 066003. PMID 23075519 DOI: 10.1088/1741-2560/9/6/066003  0.658
2012 Berger T, Song D, Chan R, Shin D, Marmarelis V, Hampson R, Sweatt A, Heck C, Liu C, Wills J, Lacoss J, Granacki J, Gerhardt G, Deadwyler S. Role of the hippocampus in memory formation: restorative encoding memory integration neural device as a cognitive neural prosthesis. Ieee Pulse. 3: 17-22. PMID 23014702 DOI: 10.1109/Mpul.2012.2205775  0.779
2012 Hampson RE, Gerhardt GA, Marmarelis V, Song D, Opris I, Santos L, Berger TW, Deadwyler SA. Facilitation and restoration of cognitive function in primate prefrontal cortex by a neuroprosthesis that utilizes minicolumn-specific neural firing. Journal of Neural Engineering. 9: 056012. PMID 22976769 DOI: 10.1088/1741-2560/9/5/056012  0.631
2012 Hampson RE, Song D, Chan RH, Sweatt AJ, Riley MR, Goonawardena AV, Marmarelis VZ, Gerhardt GA, Berger TW, Deadwyler SA. Closing the loop for memory prosthesis: detecting the role of hippocampal neural ensembles using nonlinear models. Ieee Transactions On Neural Systems and Rehabilitation Engineering : a Publication of the Ieee Engineering in Medicine and Biology Society. 20: 510-25. PMID 22498704 DOI: 10.1109/Tnsre.2012.2190942  0.814
2012 Berger TW, Song D, Chan RH, Marmarelis VZ, LaCoss J, Wills J, Hampson RE, Deadwyler SA, Granacki JJ. A hippocampal cognitive prosthesis: multi-input, multi-output nonlinear modeling and VLSI implementation. Ieee Transactions On Neural Systems and Rehabilitation Engineering : a Publication of the Ieee Engineering in Medicine and Biology Society. 20: 198-211. PMID 22438335 DOI: 10.1109/Tnsre.2012.2189133  0.818
2012 Hampson RE, Song D, Chan RH, Sweatt AJ, Riley MR, Gerhardt GA, Shin DC, Marmarelis VZ, Berger TW, Deadwyler SA. A nonlinear model for hippocampal cognitive prosthesis: memory facilitation by hippocampal ensemble stimulation. Ieee Transactions On Neural Systems and Rehabilitation Engineering : a Publication of the Ieee Engineering in Medicine and Biology Society. 20: 184-97. PMID 22438334 DOI: 10.1109/Tnsre.2012.2189163  0.804
2012 Lu U, Roach SM, Song D, Berger TW. Nonlinear dynamic modeling of neuron action potential threshold during synaptically driven broadband intracellular activity. Ieee Transactions On Bio-Medical Engineering. 59: 706-16. PMID 22156947 DOI: 10.1109/Tbme.2011.2178241  0.816
2012 Taghva A, Song D, Hampson RE, Deadwyler SA, Berger TW. Determination of relevant neuron-neuron connections for neural prosthetics using time-delayed mutual information: tutorial and preliminary results. World Neurosurgery. 78: 618-30. PMID 22120279 DOI: 10.1016/j.wneu.2011.09.002  0.64
2011 Li WX, Chan RH, Zhang W, Cheung RC, Song D, Berger TW. A hardware-based computational platform for Generalized Laguerre-Volterra MIMO model for neural activities. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2011: 7282-5. PMID 22256020 DOI: 10.1109/IEMBS.2011.6091698  0.769
2011 Hampson RE, Marmaralis V, Shin DC, Gerhardt GA, Song D, Chan RH, Sweatt AJ, Granacki J, Berger TW, Deadwyler SA. Restorative encoding memory integrative neural device: "REMIND". Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2011: 3338-41. PMID 22255054 DOI: 10.1109/IEMBS.2011.6090905  0.798
2011 Marmarelis VZ, Shin DC, Song D, Hampson RE, Deadwyler SA, Berger TW. Dynamic nonlinear modeling of interactions between neuronal ensembles using principal dynamic modes. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2011: 3334-7. PMID 22255053 DOI: 10.1109/IEMBS.2011.6090904  0.674
2011 Song D, Chan RH, Marmarelis VZ, Hampson RE, Deadwyler SA, Berger TW. Estimation and statistical validation of event-invariant nonlinear dynamic models of hippocampal CA3-CA1 population activities. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2011: 3330-3. PMID 22255052 DOI: 10.1109/IEMBS.2011.6090903  0.8
2011 Chan RH, Song D, Goonawardena AV, Bough S, Sesay J, Hampson RE, Deadwyler SA, Berger TW. Tracking the changes of hippocampal population nonlinear dynamics in rats learning a memory-dependent task. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2011: 3326-9. PMID 22255051 DOI: 10.1109/IEMBS.2011.6090902  0.782
2011 Lu U, Roach SM, Song D, Berger TW. A two-stage cascade nonlinear dynamical model of single neurons for the separation and quantification of pre- and post-synaptic mechanisms of synaptic transmission. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2011: 1427-30. PMID 22254586 DOI: 10.1109/IEMBS.2011.6090353  0.81
2011 Berger TW, Hampson RE, Song D, Goonawardena A, Marmarelis VZ, Deadwyler SA. A cortical neural prosthesis for restoring and enhancing memory. Journal of Neural Engineering. 8: 046017. PMID 21677369 DOI: 10.1088/1741-2560/8/4/046017  0.715
2011 Hampson RE, Sweatt AJ, Goonawardena AV, Song D, Chan RH, Marmarelis VZ, Berger TW, Deadwyler SA. Memory encoding in hippocampal ensembles is negatively influenced by cannabinoid CB1 receptors. Behavioural Pharmacology. 22: 335-46. PMID 21558844 DOI: 10.1097/Fbp.0B013E3283473Bfd  0.754
2011 Lu U, Song D, Berger TW. Nonlinear dynamic modeling of synaptically driven single hippocampal neuron intracellular activity. Ieee Transactions On Bio-Medical Engineering. 58: 1303-13. PMID 21233041 DOI: 10.1109/Tbme.2011.2105870  0.837
2011 Li WXY, Chan RHM, Zhang W, Cheung RCC, Song D, Berger TW. High-performance and scalable system architecture for the real-time estimation of generalized laguerre-volterra MIMO model from neural population spiking activity Ieee Journal On Emerging and Selected Topics in Circuits and Systems. 1: 489-501. DOI: 10.1109/Jetcas.2011.2178733  0.646
2011 Li WXY, Chan RHM, Zhang W, Yu CW, Cheung RCC, Song D, Berger TW. FPGA architecture of generalized Laguerre-Volterra MIMO model for neural population activities Proceedings - 21st International Conference On Field Programmable Logic and Applications, Fpl 2011. 44-49. DOI: 10.1109/FPL.2011.19  0.614
2011 Li WXY, Cheung RCC, Zhang W, Chan RHM, Song D, Berger TW. FPGA architecture of generalized laguerre-volterra MIMO model for neural population spiking activities Proceedings - Ieee International Symposium On Field-Programmable Custom Computing Machines, Fccm 2011. 254. DOI: 10.1109/FCCM.2011.21  0.637
2011 Parittotokkaporn T, Sirirattanapan J, Yu P, Hsiao MC, Song D, Berger TW. Focal potassium microinjection in rat hippocampal slices inducing interictal activities Bmeicon-2011 - 4th Biomedical Engineering International Conference. 269-272. DOI: 10.1109/BMEiCon.2012.6172068  0.688
2011 Hampson RE, Simeral JD, Berger TW, Song D, Chan RHM, Marmarelis VZ, Deadwyler SA. Cognitively relevant recoding in hippocampus: Beneficial feedback of ensemble codes in a closed loop paradigm Neuromethods. 54: 215-239. DOI: 10.1007/978-1-60327-202-5_9  0.57
2010 Song D, Wang H, Berger TW. Estimating sparse Volterra models using group L1-regularization. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2010: 4128-31. PMID 21096634 DOI: 10.1109/IEMBS.2010.5627319  0.641
2010 Chan RH, Song D, Goonawardena AV, Bough S, Sesay J, Hampson RE, Deadwyler SA, Berger TW. Changes of hippocampal CA3-CA1 population nonlinear dynamics across different training sessions in rats performing a memory-dependent task. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2010: 5464-7. PMID 21096285 DOI: 10.1109/IEMBS.2010.5626536  0.787
2010 Lu U, Song D, Berger TW. Nonlinear dynamic analyses of single hippocampal neurons before and after long-term potentiation. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2010: 2762-5. PMID 21096216 DOI: 10.1109/IEMBS.2010.5626586  0.82
2010 Berger TW, Song D, Chan RH, Marmarelis VZ. The Neurobiological Basis of Cognition: Identification by Multi-Input, Multioutput Nonlinear Dynamic Modeling: A method is proposed for measuring and modeling human long-term memory formation by mathematical analysis and computer simulation of nerve-cell dynamics. Proceedings of the Ieee. Institute of Electrical and Electronics Engineers. 98: 356-374. PMID 20700470 DOI: 10.1109/JPROC.2009.2038804  0.819
2010 song D, Berger TW. Identification of Nonlinear Dynamics in Neural Population Activity Statistical Signal Processing For Neuroscience and Neurotechnology. 103-128. DOI: 10.1016/B978-0-12-375027-3.00004-1  0.593
2009 Lu U, Song D, Berger TW. Nonlinear model of single hippocampal neurons with dynamical thresholds. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2009: 3330-4. PMID 19964070 DOI: 10.1109/IEMBS.2009.5333275  0.827
2009 Chan RH, Song D, Berger TW. Nonstationary modeling of neural population dynamics. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2009: 4559-62. PMID 19963837 DOI: 10.1109/IEMBS.2009.5332701  0.777
2009 Song D, Chan RH, Marmarelis VZ, Hampson RE, Deadwyler SA, Berger TW. Sparse generalized Laguerre-Volterra model of neural population dynamics. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2009: 4555-8. PMID 19963836 DOI: 10.1109/IEMBS.2009.5332719  0.801
2009 Hsiao MC, Song D, Berger TW. Using an open-loop inverse control strategy to regulate CA1 nonlinear dynamics for an in vitro hippocampal prosthesis model. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2009: 1529-32. PMID 19963755 DOI: 10.1109/IEMBS.2009.5333072  0.724
2009 Song D, Chan RH, Marmarelis VZ, Hampson RE, Deadwyler SA, Berger TW. Nonlinear modeling of neural population dynamics for hippocampal prostheses. Neural Networks : the Official Journal of the International Neural Network Society. 22: 1340-51. PMID 19501484 DOI: 10.1016/J.Neunet.2009.05.004  0.818
2009 Song D, Marmarelis VZ, Berger TW. Parametric and non-parametric modeling of short-term synaptic plasticity. Part I: Computational study. Journal of Computational Neuroscience. 26: 1-19. PMID 18506609 DOI: 10.1007/S10827-008-0097-3  0.662
2009 Song D, Wang Z, Marmarelis VZ, Berger TW. Parametric and non-parametric modeling of short-term synaptic plasticity. Part II: Experimental study. Journal of Computational Neuroscience. 26: 21-37. PMID 18504530 DOI: 10.1007/S10827-008-0098-2  0.666
2008 Hsiao MC, Song D, Berger TW. Control theory-based regulation of hippocampal CA1 nonlinear dynamics. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2008: 5535-8. PMID 19163971 DOI: 10.1109/IEMBS.2008.4650468  0.723
2008 Chan RH, Song D, Berger TW. Tracking temporal evolution of nonlinear dynamics in hippocampus using time-varying volterra kernels. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2008: 4996-9. PMID 19163839 DOI: 10.1109/IEMBS.2008.4650336  0.784
2008 Lu U, Song D, Berger TW. Nonparametric modeling of single neuron. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2008: 2469-72. PMID 19163203 DOI: 10.1109/IEMBS.2008.4649700  0.834
2008 Song D, Hendrickson P, Marmarelis VZ, Aguayo J, He J, Loeb GE, Berger TW. Predicting EMG with generalized Volterra kernel model. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2008: 201-4. PMID 19162628 DOI: 10.1109/IEMBS.2008.4649125  0.815
2008 Stephens ML, Spencer DD, Cavus I, Hsiao MC, Song D, Deadwyler SA, Hampson RE, Putz D, Quintero JE, Bensalem-Owen MK, Hascup KN, Rutherford EC, Day BK, Nickell JR, Pomerleau F, et al. Microelectrode-Based Epilepsy Therapy: A Hybrid Neural Prosthesis Incorporating Seizure Prediction and Intervention with Biomimetic Maintenance of Normal Hippocampal Function Computational Neuroscience in Epilepsy. 559-586. DOI: 10.1016/B978-012373649-9.50036-3  0.688
2007 Song D, Chan RH, Marmarelis VZ, Hampson RE, Deadwyler SA, Berger TW. Statistical selection of multiple-input multiple-output nonlinear dynamic models of spike train transformation. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2007: 4727-30. PMID 18003061 DOI: 10.1109/IEMBS.2007.4353395  0.794
2007 Song D, Chan RH, Marmarelis VZ, Hampson RE, Deadwyler SA, Berger TW. Nonlinear dynamic modeling of spike train transformations for hippocampal-cortical prostheses. Ieee Transactions On Bio-Medical Engineering. 54: 1053-66. PMID 17554824 DOI: 10.1109/Tbme.2007.891948  0.826
2006 Song D, Chan RH, Marmarelis VZ, Hampson RE, Deadwyler SA, Berger TW. Physiologically plausible stochastic nonlinear kernel models of spike train to spike train transformation. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 1: 6129-32. PMID 17946359 DOI: 10.1109/IEMBS.2006.259253  0.8
2006 Xie X, Song D, Wang Z, Marmarelis VZ, Berger TW. Interaction of short-term neuronal plasticity and synaptic plasticity revealed by nonlinear systems analysis in dentate granule cells. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 1: 5543-6. PMID 17946314 DOI: 10.1109/IEMBS.2006.259706  0.673
2006 Hsiao MC, Chan CH, Srinivasan V, Ahuja A, Erinjippurath G, Zanos TP, Gholmieh G, Song D, Wills JD, LaCoss J, Courellis S, Tanguay AR, Granacki JJ, Marmarelis VZ, Berger TW. VLSI implementation of a nonlinear neuronal model: a "neural prosthesis" to restore hippocampal trisynaptic dynamics. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 1: 4396-9. PMID 17946244 DOI: 10.1109/IEMBS.2006.260138  0.805
2006 Gholmieh G, Soussou W, Han M, Ahuja A, Hsiao MC, Song D, Tanguay AR, Berger TW. Custom-designed high-density conformal planar multielectrode arrays for brain slice electrophysiology. Journal of Neuroscience Methods. 152: 116-29. PMID 16289315 DOI: 10.1016/J.Jneumeth.2005.08.021  0.79
2006 Soussou W, Gholmieh G, Han M, Ahuja A, Song D, Hsiao MC, Wang Z, Tanguay AR, Berger TW. Mapping spatio-temporal electrophysiological activity in hippocampal slices with conformal planar multi-electrode arrays Advances in Network Electrophysiology: Using Multi-Electrode Arrays. 127-152. DOI: 10.1007/0-387-25858-2_6  0.799
2005 Berger TW, Ahuja A, Courellis SH, Deadwyler SA, Erinjippurath G, Gerhardt GA, Gholmieh G, Granacki JJ, Hampson R, Hsaio MC, LaCoss J, Marmarelis VZ, Nasiatka P, Srinivasan V, Song D, et al. Restoring lost cognitive function. Ieee Engineering in Medicine and Biology Magazine : the Quarterly Magazine of the Engineering in Medicine & Biology Society. 24: 30-44. PMID 16248115 DOI: 10.1109/Memb.2005.1511498  0.797
2003 Dimoka A, Courellis SH, Song D, Marmarelis VZ, Berger TW. Identification of the Lateral and Medial Perforant Path of the Hippocampus Using Single and Dual Random Impulse Train Stimulation Annual International Conference of the Ieee Engineering in Medicine and Biology - Proceedings. 2: 1933-1936.  0.698
2002 Song D, Wang Z, Berger TW. Contribution of T-type VDCC to TEA-induced long-term synaptic modification in hippocampal CA1 and dentate gyrus. Hippocampus. 12: 689-97. PMID 12440583 DOI: 10.1002/hipo.10105  0.622
2002 Wang Z, Song D, Berger TW. Contribution of NMDA receptor channels to the expression of LTP in the hippocampal dentate gyrus. Hippocampus. 12: 680-8. PMID 12440582 DOI: 10.1002/hipo.10104  0.611
2001 Song D, Xie X, Wang Z, Berger TW. Differential effect of TEA on long-term synaptic modification in hippocampal CA1 and dentate gyrus in vitro. Neurobiology of Learning and Memory. 76: 375-87. PMID 11726243 DOI: 10.1006/nlme.2001.4032  0.607
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