Jesse Bloom - Publications

Affiliations: 
2002-2007 California Institute of Technology, Pasadena, CA 

25 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Sourisseau M, Lawrence DJP, Schwarz MC, Storrs CH, Veit EC, Bloom JD, Evans MJ. Deep Mutational Scanning to Map How Zika Envelope Protein Mutations Affect Viral Growth and Antibody Escape Proceedings. 50: 93. DOI: 10.3390/proceedings2020050093  0.329
2019 Sourisseau M, Lawrence DJP, Schwarz MC, Storrs CH, Veit EC, Bloom JD, Evans MJ. Deep mutational scanning comprehensively maps how Zika envelope protein mutations affect viral growth and antibody escape. Journal of Virology. PMID 31511387 DOI: 10.1128/JVI.01291-19  0.326
2019 Hom N, Gentles L, Bloom JD, Lee KK. Deep mutational scan of the highly conserved influenza A M1 matrix protein reveals substantial intrinsic mutational tolerance. Journal of Virology. PMID 31019050 DOI: 10.1128/Jvi.00161-19  0.303
2019 Drummond DA, Bloom JD. A Nobel Prize for evolution Evolution. 73: 630-631. DOI: 10.1111/Evo.13697  0.475
2013 Ashenberg O, Gong LI, Bloom JD. Mutational effects on stability are largely conserved during protein evolution. Proceedings of the National Academy of Sciences of the United States of America. 110: 21071-6. PMID 24324165 DOI: 10.1073/Pnas.1314781111  0.353
2013 Ashenberg O, Gong LI, Bloom JD. Mutational effects on stability are largely conserved during protein evolution Proceedings of the National Academy of Sciences of the United States of America. 110: 21071-21076. DOI: 10.1073/pnas.1314781111  0.347
2012 Liberles DA, Teichmann SA, Bahar I, Bastolla U, Bloom J, Bornberg-Bauer E, Colwell LJ, de Koning AP, Dokholyan NV, Echave J, Elofsson A, Gerloff DL, Goldstein RA, Grahnen JA, Holder MT, et al. The interface of protein structure, protein biophysics, and molecular evolution. Protein Science : a Publication of the Protein Society. 21: 769-85. PMID 22528593 DOI: 10.1002/Pro.2071  0.459
2010 Jäckel C, Bloom JD, Kast P, Arnold FH, Hilvert D. Consensus protein design without phylogenetic bias. Journal of Molecular Biology. 399: 541-6. PMID 20433850 DOI: 10.1016/J.Jmb.2010.04.039  0.414
2009 Bloom JD, Arnold FH. In the light of directed evolution: pathways of adaptive protein evolution. Proceedings of the National Academy of Sciences of the United States of America. 106: 9995-10000. PMID 19528653 DOI: 10.1073/Pnas.0901522106  0.342
2009 Bloom JD, Glassman MJ. Inferring stabilizing mutations from protein phylogenies: application to influenza hemagglutinin. Plos Computational Biology. 5: e1000349. PMID 19381264 DOI: 10.1371/journal.pcbi.1000349  0.351
2007 Li Y, Drummond DA, Sawayama AM, Snow CD, Bloom JD, Arnold FH. A diverse family of thermostable cytochrome P450s created by recombination of stabilizing fragments. Nature Biotechnology. 25: 1051-6. PMID 17721510 DOI: 10.1038/Nbt1333  0.53
2007 Bloom JD, Lu Z, Chen D, Raval A, Venturelli OS, Arnold FH. Evolution favors protein mutational robustness in sufficiently large populations. Bmc Biology. 5: 29. PMID 17640347 DOI: 10.1186/1741-7007-5-29  0.328
2007 Bloom JD, Romero PA, Lu Z, Arnold FH. Neutral genetic drift can alter promiscuous protein functions, potentially aiding functional evolution. Biology Direct. 2: 17. PMID 17598905 DOI: 10.1186/1745-6150-2-17  0.355
2007 Bloom JD, Arnold FH, Wilke CO. Breaking proteins with mutations: threads and thresholds in evolution. Molecular Systems Biology. 3: 76. PMID 17262035 DOI: 10.1038/Msb4100119  0.461
2007 Bloom JD, Raval A, Wilke CO. Thermodynamics of neutral protein evolution. Genetics. 175: 255-66. PMID 17110496 DOI: 10.1534/genetics.106.061754  0.583
2007 Li Y, Drummond DA, Sawayama AM, Snow CD, Bloom JD, Arnold FH. Erratum: Corrigendum: A diverse family of thermostable cytochrome P450s created by recombination of stabilizing fragments Nature Biotechnology. 25: 1488-1488. DOI: 10.1038/Nbt1207-1488D  0.463
2006 Bloom JD, Drummond DA, Arnold FH, Wilke CO. Structural determinants of the rate of protein evolution in yeast. Molecular Biology and Evolution. 23: 1751-61. PMID 16782762 DOI: 10.1093/Molbev/Msl040  0.645
2006 Otey CR, Landwehr M, Endelman JB, Hiraga K, Bloom JD, Arnold FH. Structure-guided recombination creates an artificial family of cytochromes P450. Plos Biology. 4: e112. PMID 16594730 DOI: 10.1371/Journal.Pbio.0040112  0.364
2006 Bloom JD, Labthavikul ST, Otey CR, Arnold FH. Protein stability promotes evolvability. Proceedings of the National Academy of Sciences of the United States of America. 103: 5869-74. PMID 16581913 DOI: 10.1073/Pnas.0510098103  0.404
2005 Drummond DA, Bloom JD, Adami C, Wilke CO, Arnold FH. Why highly expressed proteins evolve slowly. Proceedings of the National Academy of Sciences of the United States of America. 102: 14338-43. PMID 16176987 DOI: 10.1073/Pnas.0504070102  0.671
2005 Wilke CO, Bloom JD, Drummond DA, Raval A. Predicting the tolerance of proteins to random amino acid substitution. Biophysical Journal. 89: 3714-20. PMID 16150971 DOI: 10.1529/Biophysj.105.062125  0.617
2005 Bloom JD, Silberg JJ, Wilke CO, Drummond DA, Adami C, Arnold FH. Thermodynamic prediction of protein neutrality. Proceedings of the National Academy of Sciences of the United States of America. 102: 606-11. PMID 15644440 DOI: 10.1073/Pnas.0406744102  0.669
2004 Bloom JD, Adami C. Evolutionary rate depends on number of protein-protein interactions independently of gene expression level: Response Bmc Evolutionary Biology. 4. PMID 15171796 DOI: 10.1186/1471-2148-4-14  0.553
2004 Bloom JD, Wilke CO, Arnold FH, Adami C. Stability and the evolvability of function in a model protein. Biophysical Journal. 86: 2758-64. PMID 15111394 DOI: 10.1016/S0006-3495(04)74329-5  0.618
2003 Bloom JD, Adami C. Apparent dependence of protein evolutionary rate on number of interactions is linked to biases in protein-protein interactions data sets Bmc Evolutionary Biology. 3. PMID 14525624 DOI: 10.1186/1471-2148-3-21  0.552
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