Paul Schmidt, Ph.D. - Publications

Affiliations: 
2001- Department of Biology University of Pennsylvania, Philadelphia, PA, United States 
Area:
ecology, evolution, Drosophila
Website:
https://web.sas.upenn.edu/paul-schmidt-lab/

64 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Berardi S, Rhodes JA, Berner MC, Greenblum SI, Bitter MC, Behrman EL, Betancourt NJ, Bergland AO, Petrov DA, Rajpurohit S, Schmidt P. pigmentation demonstrates adaptive phenotypic parallelism but genomic unpredictability over multiple timescales. Biorxiv : the Preprint Server For Biology. PMID 39211235 DOI: 10.1101/2024.08.09.607378  0.848
2023 DiVito Evans A, Fairbanks RA, Schmidt P, Levine MT. Histone methylation regulates reproductive diapause in Drosophila melanogaster. Plos Genetics. 19: e1010906. PMID 37703303 DOI: 10.1371/journal.pgen.1010906  0.353
2023 Kapun M, Mitchell ED, Kawecki TJ, Schmidt P, Flatt T. An Ancestral Balanced Inversion Polymorphism Confers Global Adaptation. Molecular Biology and Evolution. PMID 37220650 DOI: 10.1093/molbev/msad118  0.438
2022 Rudman SM, Greenblum SI, Rajpurohit S, Betancourt NJ, Hanna J, Tilk S, Yokoyama T, Petrov DA, Schmidt P. Direct observation of adaptive tracking on ecological time scales in . Science (New York, N.Y.). 375: eabj7484. PMID 35298245 DOI: 10.1126/science.abj7484  0.839
2021 Kapun M, Nunez JCB, Bogaerts-Márquez M, Murga-Moreno J, Paris M, Outten J, Coronado-Zamora M, Tern C, Rota-Stabelli O, García Guerreiro MP, Casillas S, Orengo DJ, Puerma E, Kankare M, Ometto L, ... ... Schmidt P, et al. Drosophila Evolution over Space and Time (DEST) - A New Population Genomics Resource. Molecular Biology and Evolution. PMID 34469576 DOI: 10.1093/molbev/msab259  0.81
2021 Machado HE, Bergland A, Taylor RW, Tilk S, Behrman E, Dyer K, Fabian DK, Flatt T, González J, Karasov TL, Kim BY, Kozeretska I, Lazzaro BP, Merritt T, Pool JE, ... ... Schmidt P, et al. Broad geographic sampling reveals the shared basis and environmental correlates of seasonal adaptation in Drosophila. Elife. 10. PMID 34155971 DOI: 10.7554/eLife.67577  0.837
2021 Betancourt NJ, Rajpurohit S, Durmaz E, Fabian DK, Kapun M, Flatt T, Schmidt P. Allelic polymorphism at foxo contributes to local adaptation in Drosophila melanogaster. Molecular Ecology. PMID 33914989 DOI: 10.1111/mec.15939  0.857
2021 Grainger TN, Rudman SM, Schmidt P, Levine JM. Competitive history shapes rapid evolution in a seasonal climate. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33536336 DOI: 10.1073/pnas.2015772118  0.39
2021 Rajpurohit S, Vrkoslav V, Hanus R, Gibbs AG, Cvačka J, Schmidt PS. Post-eclosion temperature effects on insect cuticular hydrocarbon profiles. Ecology and Evolution. 11: 352-364. PMID 33437434 DOI: 10.1002/ece3.7050  0.812
2020 Erickson PA, Weller CA, Song DY, Bangerter AS, Schmidt P, Bergland AO. Unique genetic signatures of local adaptation over space and time for diapause, an ecologically relevant complex trait, in Drosophila melanogaster. Plos Genetics. 16: e1009110. PMID 33216740 DOI: 10.1371/journal.pgen.1009110  0.538
2020 Kapun M, Barrón MG, Staubach F, Obbard DJ, Wiberg RAW, Vieira J, Goubert C, Rota-Stabelli O, Kankare M, Bogaerts-Márquez M, Haudry A, Waidele L, Kozeretska I, Pasyukova EG, Loeschcke V, ... ... Schmidt PS, et al. Genomic analysis of European Drosophila melanogaster populations reveals longitudinal structure, continent-wide selection, and previously unknown DNA viruses. Molecular Biology and Evolution. PMID 32413142 DOI: 10.1093/Molbev/Msaa120  0.469
2019 Walters AW, Hughes RC, Call TB, Walker CJ, Wilcox H, Petersen SC, Rudman SM, Newell PD, Douglas AE, Schmidt PS, Chaston JM. The microbiota influences the Drosophila melanogaster life history strategy. Molecular Ecology. PMID 31863671 DOI: 10.1111/Mec.15344  0.356
2019 Tilk S, Bergland A, Goodman A, Schmidt P, Petrov D, Greenblum S. Accurate Allele Frequencies from Ultra-low Coverage Pool-Seq Samples in Evolve-and-Resequence Experiments. G3 (Bethesda, Md.). PMID 31636085 DOI: 10.1534/G3.119.400755  0.319
2019 Rudman SM, Greenblum S, Hughes RC, Rajpurohit S, Kiratli O, Lowder DB, Lemmon SG, Petrov DA, Chaston JM, Schmidt P. Microbiome composition shapes rapid genomic adaptation of . Proceedings of the National Academy of Sciences of the United States of America. PMID 31527278 DOI: 10.1073/Pnas.1907787116  0.848
2019 Durmaz E, Rajpurohit S, Betancourt N, Fabian DK, Kapun M, Schmidt P, Flatt T. A clinal polymorphism in the insulin signaling transcription factor foxo contributes to life-history adaptation in Drosophila. Evolution; International Journal of Organic Evolution. PMID 31111462 DOI: 10.1111/Evo.13759  0.825
2019 Rajpurohit S, Schmidt PS. Latitudinal Pigmentation Variation Contradicts Ultraviolet Radiation Exposure: A Case Study in Tropical Indian . Frontiers in Physiology. 10: 84. PMID 30804808 DOI: 10.3389/fphys.2019.00084  0.818
2018 Rajpurohit S, Gefen E, Bergland AO, Petrov DA, Gibbs AG, Schmidt P. Spatiotemporal dynamics and genome-wide association analysis of desiccation tolerance in Drosophila melanogaster. Molecular Ecology. PMID 30051644 DOI: 10.1111/Mec.14814  0.844
2018 Durmaz E, Benson C, Kapun M, Schmidt P, Flatt T. An Inversion Supergene in Drosophila Underpins Latitudinal Clines in Survival Traits. Journal of Evolutionary Biology. PMID 29904977 DOI: 10.1111/Jeb.13310  0.362
2018 Behrman EL, Howick VM, Kapun M, Staubach F, Bergland AO, Petrov DA, Lazzaro BP, Schmidt PS. Rapid seasonal evolution in innate immunity of wild Drosophila melanogaster. Proceedings. Biological Sciences. 285. PMID 29321302 DOI: 10.1098/Rspb.2017.2599  0.806
2017 Wittmann MJ, Bergland AO, Feldman MW, Schmidt PS, Petrov DA. Seasonally fluctuating selection can maintain polymorphism at many loci via segregation lift. Proceedings of the National Academy of Sciences of the United States of America. PMID 29087300 DOI: 10.1073/Pnas.1702994114  0.49
2017 Williams CM, Ragland GJ, Betini G, Buckley LB, Cheviron ZA, Donohue K, Hereford J, Humphries MM, Lisovski S, Marshall KE, Schmidt PS, Sheldon KS, Varpe Ø, Visser ME. Understanding Evolutionary Impacts of Seasonality: An Introduction to the Symposium. Integrative and Comparative Biology. PMID 29045649 DOI: 10.1093/Icb/Icx122  0.394
2017 Rajpurohit S, Zhao X, Schmidt PS. A resource on latitudinal and altitudinal clines of ecologically relevant phenotypes of the Indian Drosophila. Scientific Data. 4: 170066. PMID 28509912 DOI: 10.1038/sdata.2017.66  0.823
2017 Cogni R, Kuczynski K, Koury S, Lavington E, Behrman EL, O'Brien KR, Schmidt PS, Eanes WF. On the Long-term Stability of Clines in Some Metabolic Genes in Drosophila melanogaster. Scientific Reports. 7: 42766. PMID 28220806 DOI: 10.1038/Srep42766  0.811
2017 Mathur V, Schmidt PS. Adaptive patterns of phenotypic plasticity in laboratory and field environments in Drosophila melanogaster. Evolution; International Journal of Organic Evolution. 71: 465-474. PMID 27925178 DOI: 10.1111/evo.13144  0.81
2016 Rajpurohit S, Richardson R, Dean J, Vazquez R, Wong G, Schmidt PS. Pigmentation and fitness trade-offs through the lens of artificial selection. Biology Letters. 12. PMID 28120808 DOI: 10.1098/rsbl.2016.0625  0.843
2016 Rajpurohit S, Hanus R, Vrkoslav V, Behrman EL, Bergland AO, Petrov D, Cvačka J, Schmidt PS. Adaptive dynamics of cuticular hydrocarbons in Drosophila. Journal of Evolutionary Biology. PMID 27718537 DOI: 10.1111/Jeb.12988  0.848
2016 Rajpurohit S, Schmidt PS. Measuring thermal behavior in smaller insects: A case study in Drosophila melanogaster demonstrates effects of sex, geographic origin, and rearing temperature on adult behavior. Fly. 10: 149-61. PMID 27230726 DOI: 10.1080/19336934.2016.1194145  0.777
2015 Zhao X, Bergland AO, Behrman EL, Gregory BD, Petrov DA, Schmidt PS. Global transcriptional profiling of diapause and climatic adaptation in Drosophila melanogaster. Molecular Biology and Evolution. PMID 26568616 DOI: 10.1093/Molbev/Msv263  0.837
2015 Bergland AO, Tobler R, González J, Schmidt P, Petrov D. Secondary contact and local adaptation contribute to genome-wide patterns of clinal variation in Drosophila melanogaster. Molecular Ecology. PMID 26547394 DOI: 10.1111/Mec.13455  0.465
2015 Machado HE, Bergland AO, O'Brien KR, Behrman EL, Schmidt PS, Petrov DA. Comparative population genomics of latitudinal variation in D. simulans and D. melanogaster. Molecular Ecology. PMID 26523848 DOI: 10.1111/Mec.13446  0.817
2015 Behrman EL, Watson SS, O'Brien KR, Heschel MS, Schmidt PS. Seasonal variation in life history traits in two Drosophila species. Journal of Evolutionary Biology. 28: 1691-704. PMID 26174167 DOI: 10.1111/jeb.12690  0.822
2015 Fabian DK, Lack JB, Mathur V, Schlötterer C, Schmidt PS, Pool JE, Flatt T. Spatially varying selection shapes life history clines among populations of Drosophila melanogaster from sub-Saharan Africa. Journal of Evolutionary Biology. 28: 826-40. PMID 25704153 DOI: 10.1111/Jeb.12607  0.414
2015 Cogni R, Kuczynski K, Lavington E, Koury S, Behrman EL, O'Brien KR, Schmidt PS, Eanes WF. Variation in Drosophila melanogaster central metabolic genes appears driven by natural selection both within and between populations. Proceedings. Biological Sciences / the Royal Society. 282: 20142688. PMID 25520361 DOI: 10.1098/Rspb.2014.2688  0.827
2014 Bergland AO, Behrman EL, O'Brien KR, Schmidt PS, Petrov DA. Genomic evidence of rapid and stable adaptive oscillations over seasonal time scales in Drosophila. Plos Genetics. 10: e1004775. PMID 25375361 DOI: 10.1371/Journal.Pgen.1004775  0.858
2014 Paaby AB, Bergland AO, Behrman EL, Schmidt PS. A highly pleiotropic amino acid polymorphism in the Drosophila insulin receptor contributes to life-history adaptation. Evolution; International Journal of Organic Evolution. 68: 3395-409. PMID 25319083 DOI: 10.1111/Evo.12546  0.834
2014 Maguire SE, Schmidt PS, Sehgal A. Natural Populations of Drosophila melanogaster Reveal Features of an Uncharacterized Circadian Property: The Lower Temperature Limit of Rhythmicity. Journal of Biological Rhythms. 29: 167-180. PMID 24916390 DOI: 10.1177/0748730414537801  0.315
2014 Lavington E, Cogni R, Kuczynski C, Koury S, Behrman EL, O'Brien KR, Schmidt PS, Eanes WF. A small system--high-resolution study of metabolic adaptation in the central metabolic pathway to temperate climates in Drosophila melanogaster. Molecular Biology and Evolution. 31: 2032-41. PMID 24770333 DOI: 10.1093/Molbev/Msu146  0.804
2014 Cogni R, Kuczynski C, Koury S, Lavington E, Behrman EL, O'Brien KR, Schmidt PS, Eanes WF. The intensity of selection acting on the couch potato gene--spatial-temporal variation in a diapause cline. Evolution; International Journal of Organic Evolution. 68: 538-48. PMID 24303812 DOI: 10.1111/Evo.12291  0.819
2012 Fabian DK, Kapun M, Nolte V, Kofler R, Schmidt PS, Schlötterer C, Flatt T. Genome-wide patterns of latitudinal differentiation among populations of Drosophila melanogaster from North America. Molecular Ecology. 21: 4748-69. PMID 22913798 DOI: 10.1111/J.1365-294X.2012.05731.X  0.438
2012 Flight PA, O'Brien MA, Schmidt PS, Rand DM. Genetic structure and the North American postglacial expansion of the barnacle, Semibalanus balanoides. The Journal of Heredity. 103: 153-65. PMID 21885571 DOI: 10.1093/jhered/esr083  0.636
2010 Paaby AB, Blacket MJ, Hoffmann AA, Schmidt PS. Identification of a candidate adaptive polymorphism for Drosophila life history by parallel independent clines on two continents. Molecular Ecology. 19: 760-74. PMID 20074316 DOI: 10.1111/J.1365-294X.2009.04508.X  0.821
2009 Emerson KJ, Uyemura AM, McDaniel KL, Schmidt PS, Bradshaw WE, Holzapfel CM. Environmental control of ovarian dormancy in natural populations of drosophila melanogaster Journal of Comparative Physiology a: Neuroethology, Sensory, Neural, and Behavioral Physiology. 195: 825-829. PMID 19669646 DOI: 10.1007/S00359-009-0460-5  0.346
2009 Paaby AB, Schmidt PS. Dissecting the genetics of longevity in Drosophila melanogaster. Fly. 3: 29-38. PMID 19182541 DOI: 10.4161/fly.3.1.7771  0.76
2008 Schmidt PS, Serrão EA, Pearson GA, Riginos C, Rawson PD, Hilbish TJ, Brawley SH, Trussell GC, Carrington E, Wethey DS, Grahame JW, Bonhomme F, Rand DM. Ecological genetics in the North Atlantic: environmental gradients and adaptation at specific loci. Ecology. 89: S91-107. PMID 19097487 DOI: 10.1890/07-1162.1  0.68
2008 Schmidt PS, Zhu CT, Das J, Batavia M, Yang L, Eanes WF. An amino acid polymorphism in the couch potato gene forms the basis for climatic adaptation in Drosophila melanogaster. Proceedings of the National Academy of Sciences of the United States of America. 105: 16207-11. PMID 18852464 DOI: 10.1073/pnas.0805485105  0.815
2008 Phifer-Rixey M, Heckman M, Trussell GC, Schmidt PS. Maintenance of clinal variation for shell colour phenotype in the flat periwinkle Littorina obtusata. Journal of Evolutionary Biology. 21: 966-78. PMID 18507701 DOI: 10.1111/j.1420-9101.2008.01549.x  0.395
2008 Paaby AB, Schmidt PS. Functional significance of allelic variation at methuselah, an aging gene in Drosophila. Plos One. 3: e1987. PMID 18414670 DOI: 10.1371/journal.pone.0001987  0.763
2008 Schmidt PS, Paaby AB. Reproductive diapause and life-history clines in North American populations of Drosophila melanogaster. Evolution; International Journal of Organic Evolution. 62: 1204-15. PMID 18298646 DOI: 10.1111/j.1558-5646.2008.00351.x  0.81
2007 Schmidt PS, Phifer-Rixey M, Taylor GM, Christner J. Genetic heterogeneity among intertidal habitats in the flat periwinkle, Littorina obtusata. Molecular Ecology. 16: 2393-404. PMID 17561900 DOI: 10.1111/j.1365-294X.2007.03323.x  0.833
2007 Flowers JM, Sezgin E, Kumagai S, Duvernell DD, Matzkin LM, Schmidt PS, Eanes WF. Adaptive evolution of metabolic pathways in Drosophila. Molecular Biology and Evolution. 24: 1347-54. PMID 17379620 DOI: 10.1093/Molbev/Msm057  0.806
2007 Flowers JM, Sezgin E, Kumagai S, Duvernell DD, Matzkin LM, Schmidt PS, Eanes WF. Erratum: Adaptive evolution of metabolic pathways in Drosophila (Molecular Biology and Evolution (2007) 24, (1347-1354)) Molecular Biology and Evolution. 24: 1575. DOI: 10.1093/Molbev/Msm112  0.759
2006 Schmidt PS, Conde DR. Environmental heterogeneity and the maintenance of genetic variation for reproductive diapause in Drosophila melanogaster. Evolution; International Journal of Organic Evolution. 60: 1602-11. PMID 17017061  0.472
2006 Schmidt PS, Conde DR. ENVIRONMENTAL HETEROGENEITY AND THE MAINTENANCE OF GENETIC VARIATION FOR REPRODUCTIVE DIAPAUSE IN DROSOPHILA MELANOGASTER Evolution. 60: 1602. DOI: 10.1554/05-430.1  0.322
2006 Schmidt PS, Conde DR. ENVIRONMENTAL HETEROGENEITY AND THE MAINTENANCE OF GENETIC VARIATION FOR REPRODUCTIVE DIAPAUSE IN DROSOPHILA MELANOGASTER Evolution. 60: 1602-1611. DOI: 10.1111/j.0014-3820.2006.tb00505.x  0.322
2005 Schmidt PS, Paaby AB, Heschel MS. Genetic variance for diapause expression and associated life histories in Drosophila melanogaster. Evolution; International Journal of Organic Evolution. 59: 2616-25. PMID 16526509  0.783
2005 Schmidt PS, Matzkin L, Ippolito M, Eanes WF. Geographic variation in diapause incidence, life-history traits, and climatic adaptation in Drosophila melanogaster. Evolution; International Journal of Organic Evolution. 59: 1721-32. PMID 16331839 DOI: 10.1111/J.0014-3820.2005.Tb01821.X  0.821
2003 Duvernell DD, Schmidt PS, Eanes WF. Clines and adaptive evolution in the methuselah gene region in Drosophila melanogaster. Molecular Ecology. 12: 1277-85. PMID 12694290 DOI: 10.1046/j.1365-294X.2003.01841.x  0.737
2003 Schmidt PS. The effects of diet and physiological stress on the evolutionary dynamics of an enzyme polymorphism. Proceedings. Biological Sciences. 268: 9-14. PMID 12123304 DOI: 10.1098/rspb.2000.1323  0.333
2002 Rand DM, Spaeth PS, Sackton TB, Schmidt PS. Ecological Genetics of Mpi and Gpi Polymorphisms in the Acorn Barnacle and the Spatial Scale of Neutral and Non-neutral Variation. Integrative and Comparative Biology. 42: 825-36. PMID 21708781 DOI: 10.1093/icb/42.4.825  0.661
2001 Schmidt PS, Rand DM. Adaptive maintenance of genetic polymorphism in an intertidal barnacle: Habitat- and life-stage-specific survivorship of Mpi genotypes Evolution. 55: 1336-1344. PMID 11525458 DOI: 10.1111/J.0014-3820.2001.Tb00656.X  0.672
2001 Schmidt PS, Rand DM. ADAPTIVE MAINTENANCE OF GENETIC POLYMORPHISM IN AN INTERTIDAL BARNACLE: HABITAT- AND LIFE-STAGE-SPECIFIC SURVIVORSHIP OF MPI GENOTYPES Evolution. 55: 1336. DOI: 10.1554/0014-3820(2001)055[1336:AMOGPI]2.0.CO;2  0.336
2000 Schmidt PS, Duvernell DD, Eanes WF. Adaptive evolution of a candidate gene for aging in Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 97: 10861-5. PMID 10995474 DOI: 10.1073/pnas.190338897  0.779
2000 Schmidt PS, Bertness MD, Rand DM. Environmental heterogeneity and balancing selection in the acorn barnacle Semibalanus balanoides. Proceedings. Biological Sciences / the Royal Society. 267: 379-84. PMID 10722220 DOI: 10.1098/Rspb.2000.1012  0.662
1999 Schmidt PS, Rand DM. INTERTIDAL MICROHABITAT AND SELECTION AT MPI: INTERLOCUS CONTRASTS IN THE NORTHERN ACORN BARNACLE, SEMIBALANUS BALANOIDES. Evolution; International Journal of Organic Evolution. 53: 135-146. PMID 28565188 DOI: 10.1111/j.1558-5646.1999.tb05339.x  0.662
Show low-probability matches.