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Susan E. Johnston - Publications

Affiliations: 
University of Edinburgh, Edinburgh, Scotland, United Kingdom 
Area:
Evolution, Genetics
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40 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Hewett AM, Johnston SE, Morris A, Morris S, Pemberton JM. Genetic architecture of inbreeding depression may explain its persistence in a population of wild red deer. Molecular Ecology. e17335. PMID 38549143 DOI: 10.1111/mec.17335  0.398
2023 Stoffel MA, Johnston SE, Pilkington JG, Pemberton JM. Purifying and balancing selection on embryonic semi-lethal haplotypes in a wild mammal. Evolution Letters. 8: 222-230. PMID 38525027 DOI: 10.1093/evlett/qrad053  0.381
2023 Brekke C, Johnston SE, Knutsen TM, Berg P. Genetic architecture of individual meiotic crossover rate and distribution in Atlantic Salmon. Scientific Reports. 13: 20481. PMID 37993527 DOI: 10.1038/s41598-023-47208-3  0.414
2023 Wang Y, McNeil P, Abdulazeez R, Pascual M, Johnston SE, Keightley PD, Obbard D. Variation in mutation, recombination, and transposition rates in and . Genome Research. PMID 37037625 DOI: 10.1101/gr.277383.122  0.356
2023 Hewett AM, Stoffel MA, Peters L, Johnston SE, Pemberton JM. Selection, recombination and population history effects on runs of homozygosity (ROH) in wild red deer (Cervus elaphus). Heredity. PMID 36801920 DOI: 10.1038/s41437-023-00602-z  0.724
2023 Gauzere J, Pemberton JM, Slate J, Morris A, Morris S, Walling CA, Johnston SE. A polygenic basis for birth weight in a wild population of red deer (Cervus elaphus). G3 (Bethesda, Md.). PMID 36652410 DOI: 10.1093/g3journal/jkad018  0.798
2022 Brekke C, Berg P, Gjuvsland AB, Johnston SE. Recombination rates in pigs differ between breeds, sexes and individuals, and are associated with the RNF212, SYCP2, PRDM7, MEI1 and MSH4 loci. Genetics, Selection, Evolution : Gse. 54: 33. PMID 35596132 DOI: 10.1186/s12711-022-00723-9  0.513
2022 Huang W, Dicks KL, Hadfield JD, Johnston SE, Ballingall KT, Pemberton JM. Contemporary selection on MHC genes in a free-living ruminant population. Ecology Letters. PMID 35050541 DOI: 10.1111/ele.13957  0.664
2021 Sparks AM, Johnston SE, Handel I, Pilkington JG, Berry J, Pemberton JM, Nussey DH, Mellanby RJ. Vitamin D status is heritable and under environment-dependent selection in the wild. Molecular Ecology. PMID 34888965 DOI: 10.1111/mec.16318  0.565
2021 Peters L, Huisman J, Kruuk LEB, Pemberton JM, Johnston SE. Genomic analysis reveals a polygenic architecture of antler morphology in wild red deer (Cervus elaphus). Molecular Ecology. PMID 34878674 DOI: 10.1111/mec.16314  0.764
2021 Huang W, Dicks KL, Ballingall KT, Johnston SE, Sparks AM, Watt K, Pilkington JG, Pemberton JM. Associations between MHC class II variation and phenotypic traits in a free-living sheep population. Molecular Ecology. PMID 34748666 DOI: 10.1111/mec.16265  0.677
2021 Ashraf B, Hunter DC, Bérénos C, Ellis PA, Johnston SE, Pilkington JG, Pemberton JM, Slate J. Genomic prediction in the wild: A case study in Soay sheep. Molecular Ecology. PMID 34719074 DOI: 10.1111/mec.16262  0.792
2021 Dicks KL, Pemberton JM, Ballingall KT, Johnston SE. MHC class IIa haplotypes derived by high-throughput SNP screening in an isolated sheep population. G3 (Bethesda, Md.). 11. PMID 34568908 DOI: 10.1093/g3journal/jkab200  0.673
2021 Stoffel MA, Johnston SE, Pilkington JG, Pemberton JM. Mutation load decreases with haplotype age in wild Soay sheep. Evolution Letters. 5: 187-195. PMID 34136268 DOI: 10.1002/evl3.229  0.689
2021 Stoffel MA, Johnston SE, Pilkington JG, Pemberton JM. Mutation load decreases with haplotype age in wild Soay sheep. Evolution Letters. 5: 187-195. PMID 34136268 DOI: 10.1002/evl3.229  0.689
2020 Sparks AM, Hayward AD, Watt K, Pilkington JG, Pemberton JM, Johnston SE, McNeilly TN, Nussey DH. Maternally derived anti-helminth antibodies predict offspring survival in a wild mammal. Proceedings. Biological Sciences. 287: 20201931. PMID 33234082 DOI: 10.1098/rspb.2020.1931  0.585
2020 O'Sullivan RJ, Aykanat T, Johnston SE, Rogan G, Poole R, Prodöhl PA, de Eyto E, Primmer CR, McGinnity P, Reed TE. Captive-bred Atlantic salmon released into the wild have fewer offspring than wild-bred fish and decrease population productivity. Proceedings. Biological Sciences. 287: 20201671. PMID 33081620 DOI: 10.1098/rspb.2020.1671  0.587
2019 Sparks AM, Watt K, Sinclair R, Pilkington JG, Pemberton JM, McNeilly TN, Nussey DH, Johnston SE. The genetic architecture of helminth-specific immune responses in a wild population of Soay sheep (Ovis aries). Plos Genetics. 15: e1008461. PMID 31697674 DOI: 10.1371/Journal.Pgen.1008461  0.722
2019 O'Sullivan RJ, Aykanat T, Johnston SE, Kane A, Poole R, Rogan G, Prodöhl PA, Primmer CR, McGinnity P, Reed TE. Evolutionary stasis of a heritable morphological trait in a wild fish population despite apparent directional selection. Ecology and Evolution. 9: 7096-7111. PMID 31312431 DOI: 10.1002/Ece3.5274  0.695
2019 Mobley KB, Granroth-Wilding H, Ellmen M, Vähä JP, Aykanat T, Johnston SE, Orell P, Erkinaro J, Primmer CR. Home ground advantage: Local Atlantic salmon have higher reproductive fitness than dispersers in the wild. Science Advances. 5: eaav1112. PMID 30820455 DOI: 10.1126/Sciadv.Aav1112  0.621
2018 Sparks AM, Watt K, Sinclair R, Pilkington JG, Pemberton JM, Johnston SE, McNeilly TN, Nussey DH. Natural Selection on Antihelminth Antibodies in a Wild Mammal Population. The American Naturalist. 192: 745-760. PMID 30444657 DOI: 10.1086/700115  0.67
2018 Johnston SE, Huisman J, Pemberton JM. A Genomic Region Containing and Is Associated with Individual Recombination Rate Variation in a Wild Population of Red Deer (). G3 (Bethesda, Md.). PMID 29764960 DOI: 10.1534/G3.118.200063  0.791
2017 Stapley J, Feulner PGD, Johnston SE, Santure AW, Smadja CM. Recombination: the good, the bad and the variable. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 372. PMID 29109232 DOI: 10.1098/Rstb.2017.0279  0.417
2017 Stapley J, Feulner PGD, Johnston SE, Santure AW, Smadja CM. Variation in recombination frequency and distribution across eukaryotes: patterns and processes. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 372. PMID 29109219 DOI: 10.1098/Rstb.2016.0455  0.479
2017 Gonen S, Battagin M, Johnston SE, Gorjanc G, Hickey JM. The potential of shifting recombination hotspots to increase genetic gain in livestock breeding. Genetics, Selection, Evolution : Gse. 49: 55. PMID 28676070 DOI: 10.1186/S12711-017-0330-5  0.445
2017 Johnston SE, Huisman J, Ellis PA, Pemberton JM. A High Density Linkage Map Reveals Sexual Dimorphism in Recombination Landscapes in Red Deer (Cervus elaphus). G3 (Bethesda, Md.). PMID 28667018 DOI: 10.1534/G3.117.044198  0.715
2016 Lenormand T, Engelstädter J, Johnston SE, Wijnker E, Haag CR. Evolutionary mysteries in meiosis. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 371. PMID 27619705 DOI: 10.1098/Rstb.2016.0001  0.362
2016 Battagin M, Gorjanc G, Faux AM, Johnston SE, Hickey JM. Effect of manipulating recombination rates on response to selection in livestock breeding programs. Genetics, Selection, Evolution : Gse. 48: 44. PMID 27335010 DOI: 10.1186/S12711-016-0221-1  0.323
2016 Johnston SE, Bérénos C, Slate J, Pemberton JM. Conserved Genetic Architecture Underlying Individual Recombination Rate Variation in a Wild Population of Soay sheep (Ovis aries). Genetics. PMID 27029733 DOI: 10.1534/Genetics.115.185553  0.803
2015 Barson NJ, Aykanat T, Hindar K, Baranski M, Bolstad GH, Fiske P, Jacq C, Jensen AJ, Johnston SE, Karlsson S, Kent M, Moen T, Niemelä E, Nome T, Næsje TF, et al. Sex-dependent dominance at a single locus maintains variation in age at maturity in salmon. Nature. PMID 26536110 DOI: 10.1038/Nature16062  0.687
2015 Aykanat T, Johnston SE, Orell P, Niemelä E, Erkinaro J, Primmer CR. Low but significant genetic differentiation underlies biologically meaningful phenotypic divergence in a large Atlantic salmon population. Molecular Ecology. 24: 5158-74. PMID 26363183 DOI: 10.1111/Mec.13383  0.71
2014 Johnston SE, Orell P, Pritchard VL, Kent MP, Lien S, Niemelä E, Erkinaro J, Primmer CR. Genome-wide SNP analysis reveals a genetic basis for sea-age variation in a wild population of Atlantic salmon (Salmo salar) Molecular Ecology. 23: 3452-3468. PMID 24931807 DOI: 10.1111/Mec.12832  0.713
2014 Aykanat T, Johnston SE, Cotter D, Cross TF, Poole R, ProdÅ‘hl PA, Reed T, Rogan G, McGinnity P, Primmer CR. Molecular pedigree reconstruction and estimation of evolutionary parameters in a wild Atlantic salmon river system with incomplete sampling: a power analysis. Bmc Evolutionary Biology. 14: 68. PMID 24684698 DOI: 10.1186/1471-2148-14-68  0.647
2013 Johnston SE, Gratten J, Berenos C, Pilkington JG, Clutton-Brock TH, Pemberton JM, Slate J. Life history trade-offs at a single locus maintain sexually selected genetic variation. Nature. 502: 93-5. PMID 23965625 DOI: 10.1038/Nature12489  0.796
2013 Johnston SE, Lindqvist M, Niemelä E, Orell P, Erkinaro J, Kent MP, Lien S, Vähä JP, Vasemägi A, Primmer CR. Fish scales and SNP chips: SNP genotyping and allele frequency estimation in individual and pooled DNA from historical samples of Atlantic salmon (Salmo salar) Bmc Genomics. 14. PMID 23819691 DOI: 10.1186/1471-2164-14-439  0.578
2013 Bruneaux M, Johnston SE, Herczeg G, Merilä J, Primmer CR, Vasemägi A. Molecular evolutionary and population genomic analysis of the nine-spined stickleback using a modified restriction-site-associated DNA tag approach. Molecular Ecology. 22: 565-82. PMID 22943747 DOI: 10.1111/J.1365-294X.2012.05749.X  0.654
2011 Johnston SE, McEwan JC, Pickering NK, Kijas JW, Beraldi D, Pilkington JG, Pemberton JM, Slate J. Genome-wide association mapping identifies the genetic basis of discrete and quantitative variation in sexual weaponry in a wild sheep population. Molecular Ecology. 20: 2555-66. PMID 21651634 DOI: 10.1111/J.1365-294X.2011.05076.X  0.821
2010 Slate J, Santure AW, Feulner PG, Brown EA, Ball AD, Johnston SE, Gratten J. Genome mapping in intensively studied wild vertebrate populations. Trends in Genetics : Tig. 26: 275-84. PMID 20444518 DOI: 10.1016/J.Tig.2010.03.005  0.774
2010 Johnston SE, Beraldi D, McRae AF, Pemberton JM, Slate J. Horn type and horn length genes map to the same chromosomal region in Soay sheep. Heredity. 104: 196-205. PMID 19690581 DOI: 10.1038/Hdy.2009.109  0.804
2009 Baxter SW, Johnston SE, Jiggins CD. Butterfly speciation and the distribution of gene effect sizes fixed during adaptation Heredity. 102: 57-65. PMID 18985063 DOI: 10.1038/Hdy.2008.109  0.457
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