Jon Slate, PhD - Publications

Affiliations: 
University of Sheffield, Sheffield, England, United Kingdom 

117 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Radersma R, Garroway CJ, Santure AW, De Cauwer I, Farine DR, Slate J, Sheldon BC. Social and spatial effects on genetic variation between foraging flocks in a wild bird population. Molecular Ecology. PMID 28792645 DOI: 10.1111/mec.14291  0.44
2016 Mundy NI, Stapley J, Bennison C, Tucker R, Twyman H, Kim KW, Burke T, Birkhead TR, Andersson S, Slate J. Red Carotenoid Coloration in the Zebra Finch Is Controlled by a Cytochrome P450 Gene Cluster. Current Biology : Cb. PMID 27212402 DOI: 10.1016/j.cub.2016.04.047  0.52
2016 Johnston SE, Bérénos C, Slate J, Pemberton JM. Conserved Genetic Architecture Underlying Individual Recombination Rate Variation in a Wild Population of Soay sheep (Ovis aries). Genetics. PMID 27029733 DOI: 10.1534/genetics.115.185553  1
2016 Laine VN, Gossmann TI, Schachtschneider KM, Garroway CJ, Madsen O, Verhoeven KJ, de Jager V, Megens HJ, Warren WC, Minx P, Crooijmans RP, Corcoran P, Sheldon BC, Slate J, et al. Evolutionary signals of selection on cognition from the great tit genome and methylome. Nature Communications. 7: 10474. PMID 26805030 DOI: 10.1038/ncomms10474  1
2015 Santure AW, Poissant J, De Cauwer I, van Oers K, Robinson MR, Quinn JL, Groenen MA, Visser ME, Sheldon BC, Slate J. Replicated analysis of the genetic architecture of quantitative traits in two wild great tit populations. Molecular Ecology. PMID 26661500 DOI: 10.1111/mec.13452  1
2015 Küpper C, Stocks M, Risse JE, Dos Remedios N, Farrell LL, McRae SB, Morgan TC, Karlionova N, Pinchuk P, Verkuil YI, Kitaysky AS, Wingfield JC, Piersma T, Zeng K, Slate J, et al. A supergene determines highly divergent male reproductive morphs in the ruff. Nature Genetics. PMID 26569125 DOI: 10.1038/ng.3443  1
2015 Tyukmaeva VI, Veltsos P, Slate J, Gregson E, Kauranen H, Kankare M, Ritchie MG, Butlin RK, Hoikkala A. Localization of quantitative trait loci for diapause and other photoperiodically regulated life history traits important in adaptation to seasonally varying environments. Molecular Ecology. 24: 2809-19. PMID 25877951 DOI: 10.1111/mec.13202  1
2015 Nietlisbach P, Camenisch G, Bucher T, Slate J, Keller LF, Postma E. A microsatellite-based linkage map for song sparrows (Melospiza melodia). Molecular Ecology Resources. PMID 25865627 DOI: 10.1111/1755-0998.12414  1
2015 Firth JA, Hadfield JD, Santure AW, Slate J, Sheldon BC. The influence of nonrandom extra-pair paternity on heritability estimates derived from wild pedigrees. Evolution; International Journal of Organic Evolution. 69: 1336-44. PMID 25800997 DOI: 10.1111/evo.12649  0.44
2015 Sepil I, Radersma R, Santure AW, De Cauwer I, Slate J, Sheldon BC. No evidence for MHC class I-based disassortative mating in a wild population of great tits. Journal of Evolutionary Biology. 28: 642-54. PMID 25661713 DOI: 10.1111/jeb.12600  0.44
2015 Sepil I, Radersma R, Santure AW, De Cauwer I, Slate J, Sheldon BC. No evidence for MHC class I-based disassortative mating in a wild population of great tits Journal of Evolutionary Biology. 28: 642-654. DOI: 10.1111/jeb.12600  1
2015 Firth JA, Hadfield JD, Santure AW, Slate J, Sheldon BC. The influence of nonrandom extra-pair paternity on heritability estimates derived from wild pedigrees Evolution. 69: 1336-1344. DOI: 10.1111/evo.12649  1
2015 Uusi-Heikkilä S, Whiteley AR, Kuparinen A, Matsumura S, Venturelli PA, Wolter C, Slate J, Primmer CR, Meinelt T, Killen SS, Bierbach D, Polverino G, Ludwig A, Arlinghaus R. The evolutionary legacy of size-selective harvesting extends from genes to populations Evolutionary Applications. 8: 597-620. DOI: 10.1111/eva.12268  1
2015 Bennison C, Hemmings N, Slate J, Birkhead T. Long sperm fertilize more eggs in a bird Proceedings of the Royal Society B: Biological Sciences. 282. DOI: 10.1098/rspb.2014.1897  1
2015 Smith JA, Slate JR. Private school principals of high and low achieving schools and student achievement and teacher collaboration Private and Public Schools: International Perspectives, Management and Educational Efficiency. 29-35.  0.32
2014 Gossmann TI, Santure AW, Sheldon BC, Slate J, Zeng K. Highly variable recombinational landscape modulates efficacy of natural selection in birds Genome Biology and Evolution. 6: 2061-2075. PMID 25062920 DOI: 10.1093/gbe/evu157  1
2014 Van Oers K, Santure AW, De Cauwer I, Van Bers NEM, Crooijmans RPMA, Sheldon BC, Visser ME, Slate J, Groenen MAM. Replicated high-density genetic maps of two great tit populations reveal fine-scale genomic departures from sex-equal recombination rates Heredity. 112: 307-316. PMID 24149651 DOI: 10.1038/hdy.2013.107  1
2014 Pérez-González J, Costa V, Santos P, Slate J, Carranza J, Fernández-Llario P, Zsolnai A, Monteiro NM, Anton I, Buzgó J, Varga G, Beja-Pereira A. Males and females contribute unequally to offspring genetic diversity in the polygynandrous mating system of wild boar Plos One. 9. DOI: 10.1371/journal.pone.0115394  1
2014 Fariello MI, Servin B, Tosser-Klopp G, Rupp R, Moreno C, Cristobal MS, Boitard S, Arranz JJ, Banos G, Barendse W, El Beltagy A, Benenwitz J, Bishop S, Bunger L, Calvo J, ... ... Slate J, et al. Selection signatures in worldwide sheep populations Plos One. 9. DOI: 10.1371/journal.pone.0103813  1
2014 Comeault AA, Flaxman SM, Riesch R, Curran E, Soria-Carrasco V, Gompert Z, Farkas TE, Muschick M, Parchman TL, Schwander T, Slate J, Nosil P. Selection on a Genetic Polymorphism Counteracts Ecological Speciation in a Stick Insect Current Biology. DOI: 10.1016/j.cub.2015.05.058  1
2013 Farrell LL, Burke T, Slate J, Lank DB. A first-generation microsatellite linkage map of the ruff. Ecology and Evolution. 3: 4631-40. PMID 24363892 DOI: 10.1002/ece3.830  1
2013 Garroway CJ, Radersma R, Sepil I, Santure AW, De Cauwer I, Slate J, Sheldon BC. Fine-scale genetic structure in a wild bird population: The role of limited dispersal and environmentally based selection as causal factors Evolution. 67: 3488-3500. PMID 24299402 DOI: 10.1111/evo.12121  1
2013 Farrell LL, Burke T, Slate J, McRae SB, Lank DB. Genetic mapping of the female mimic morph locus in the ruff Bmc Genetics. 14. PMID 24256185 DOI: 10.1186/1471-2156-14-109  1
2013 Johnston SE, Gratten J, Berenos C, Pilkington JG, Clutton-Brock TH, Pemberton JM, Slate J. Life history trade-offs at a single locus maintain sexually selected genetic variation. Nature. 502: 93-5. PMID 23965625 DOI: 10.1038/nature12489  1
2013 Santure AW, De Cauwer I, Robinson MR, Poissant J, Sheldon BC, Slate J. Genomic dissection of variation in clutch size and egg mass in a wild great tit (Parus major) population. Molecular Ecology. 22: 3949-62. PMID 23889544 DOI: 10.1111/mec.12376  1
2013 Robinson MR, Santure AW, Decauwer I, Sheldon BC, Slate J. Partitioning of genetic variation across the genome using multimarker methods in a wild bird population. Molecular Ecology. 22: 3963-80. PMID 23848161 DOI: 10.1111/mec.12375  1
2013 Lin WY, Brock IW, Connley D, Cramp H, Tucker R, Slate J, Reed MW, Balasubramanian SP, Cannon-Albright LA, Camp NJ, Cox A. Associations of ATR and CHEK1 single nucleotide polymorphisms with breast cancer. Plos One. 8: e68578. PMID 23844225 DOI: 10.1371/journal.pone.0068578  1
2013 Feulner PG, Gratten J, Kijas JW, Visscher PM, Pemberton JM, Slate J. Introgression and the fate of domesticated genes in a wild mammal population. Molecular Ecology. 22: 4210-21. PMID 23786437 DOI: 10.1111/mec.12378  1
2013 Slate J. From beavis to beak color: A simulation study to examine how much QTL mapping can reveal about the genetic architecture of quantitative traits Evolution. 67: 1251-1262. PMID 23617906 DOI: 10.1111/evo.12060  1
2013 Andrew RL, Bernatchez L, Bonin A, Buerkle CA, Carstens BC, Emerson BC, Garant D, Giraud T, Kane NC, Rogers SM, Slate J, Smith H, Sork VL, Stone GN, Vines TH, et al. A road map for molecular ecology. Molecular Ecology. 22: 2605-26. PMID 23611646 DOI: 10.1111/mec.12319  1
2013 Dawson DA, Ball AD, Spurgin LG, Martín-Gálvez D, Stewart IR, Horsburgh GJ, Potter J, Molina-Morales M, Bicknell AW, Preston SA, Ekblom R, Slate J, Burke T. High-utility conserved avian microsatellite markers enable parentage and population studies across a wide range of species. Bmc Genomics. 14: 176. PMID 23497230 DOI: 10.1186/1471-2164-14-176  1
2013 Hagen IJ, Billing AM, Rønning B, Pedersen SA, Pärn H, Slate J, Jensen H. The easy road to genome-wide medium density SNP screening in a non-model species: Development and application of a 10 K SNP-chip for the house sparrow (Passer domesticus) Molecular Ecology Resources. 13: 429-439. PMID 23480404 DOI: 10.1111/1755-0998.12088  1
2013 Mossman JA, Slate J, Birkhead TR, Moore HD, Pacey AA. Sperm speed is associated with sex bias of siblings in a human population. Asian Journal of Andrology. 15: 152-4. PMID 23202700 DOI: 10.1038/aja.2012.109  1
2013 Brown EA, Pilkington JG, Nussey DH, Watt KA, Hayward AD, Tucker R, Graham AL, Paterson S, Beraldi D, Pemberton JM, Slate J. Detecting genes for variation in parasite burden and immunological traits in a wild population: testing the candidate gene approach. Molecular Ecology. 22: 757-73. PMID 22998224 DOI: 10.1111/j.1365-294X.2012.05757.x  1
2013 Feulner PGD, Gratten J, Kijas JW, Visscher PM, Pemberton JM, Slate J. Introgression and the fate of domesticated genes in a wild mammal population Molecular Ecology. 22: 4210-4221. DOI: 10.1111/mec.12378  1
2013 Alfadala S, Dawson DA, Horsburgh GJ, Behnke JM, Bajer A, Mohallal EME, Zalat S, Slate J. Large-scale isolation of Eastern spiny mouse Acomys dimidiatus microsatellite loci through GS-FLX 454 titanium sequencing Conservation Genetics Resources. 5: 519-524. DOI: 10.1007/s12686-012-9842-z  1
2012 Hoffman JI, Tucker R, Bridgett SJ, Clark MS, Forcada J, Slate J. Rates of assay success and genotyping error when single nucleotide polymorphism genotyping in non-model organisms: a case study in the Antarctic fur seal. Molecular Ecology Resources. 12: 861-72. PMID 22727236 DOI: 10.1111/j.1755-0998.2012.03158.x  1
2012 Hemmings NL, Slate J, Birkhead TR. Inbreeding causes early death in a passerine bird Nature Communications. 3. PMID 22643890 DOI: 10.1038/ncomms1870  1
2012 Van Bers NEM, Santure AW, Van Oers K, De Cauwer I, Dibbits BW, Mateman C, Crooijmans RPMA, Sheldon BC, Visser ME, Groenen MAM, Slate J. The design and cross-population application of a genome-wide SNP chip for the great tit Parus major Molecular Ecology Resources. 12: 753-770. PMID 22487530 DOI: 10.1111/j.1755-0998.2012.03141.x  1
2012 Gratten J, Pilkington JG, Brown EA, Clutton-Brock TH, Pemberton JM, Slate J. Selection and microevolution of coat pattern are cryptic in a wild population of sheep. Molecular Ecology. 21: 2977-90. PMID 22432567 DOI: 10.1111/j.1365-294X.2012.05536.x  1
2012 Billing AM, Lee AM, Skjelseth S, Borg AA, Hale MC, Slate J, Pärn H, Ringsby TH, Saether BE, Jensen H. Evidence of inbreeding depression but not inbreeding avoidance in a natural house sparrow population. Molecular Ecology. 21: 1487-99. PMID 22335620 DOI: 10.1111/j.1365-294X.2012.05490.x  1
2012 Ekblom R, Slate J, Horsburgh GJ, Birkhead T, Burke T. Comparison between Normalised and Unnormalised 454-Sequencing Libraries for Small-Scale RNA-Seq Studies. Comparative and Functional Genomics. 2012: 281693. PMID 22319409 DOI: 10.1155/2012/281693  1
2012 Mossman JA, Slate J, Birkhead TR, Moore HD, Pacey AA. Mitochondrial haplotype does not influence sperm motility in a UK population of men. Human Reproduction (Oxford, England). 27: 641-51. PMID 22215629 DOI: 10.1093/humrep/der438  1
2011 Johnston SE, McEwan JC, Pickering NK, Kijas JW, Beraldi D, Pilkington JG, Pemberton JM, Slate J. Genome-wide association mapping identifies the genetic basis of discrete and quantitative variation in sexual weaponry in a wild sheep population. Molecular Ecology. 20: 2555-66. PMID 21651634 DOI: 10.1111/j.1365-294X.2011.05076.x  1
2011 Bretman A, Rodríguez-Muñoz R, Walling C, Slate J, Tregenza T. Fine-scale population structure, inbreeding risk and avoidance in a wild insect population. Molecular Ecology. 20: 3045-55. PMID 21645160 DOI: 10.1111/j.1365-294X.2011.05140.x  1
2011 Santure AW, Gratten J, Mossman JA, Sheldon BC, Slate J. Characterisation of the transcriptome of a wild great tit Parus major population by next generation sequencing Bmc Genomics. 12. PMID 21635727 DOI: 10.1186/1471-2164-12-283  1
2011 Ekblom R, Stapley J, Ball AD, Birkhead T, Burke T, Slate J. Genetic mapping of the major histocompatibility complex in the zebra finch (Taeniopygia guttata). Immunogenetics. 63: 523-30. PMID 21494955 DOI: 10.1007/s00251-011-0525-9  1
2011 Osborne AJ, Brauning R, Schultz JK, Kennedy MA, Slate J, Gemmell NJ. Development of a predicted physical map of microsatellite locus positions for pinnipeds, with wider applicability to the Carnivora. Molecular Ecology Resources. 11: 503-13. PMID 21481208 DOI: 10.1111/j.1755-0998.2010.02962.x  1
2011 Wordley C, Slate J, Stapley J. Mining online genomic resources in Anolis carolinensis facilitates rapid and inexpensive development of cross-species microsatellite markers for the Anolis lizard genus Molecular Ecology Resources. 11: 126-133. PMID 21429109 DOI: 10.1111/j.1755-0998.2010.02863.x  1
2011 Stapley J, Wordley C, Slate J. No evidence of genetic differentiation between anoles with different dewlap color patterns Journal of Heredity. 102: 118-124. PMID 20861275 DOI: 10.1093/jhered/esq104  1
2010 Stapley J, Reger J, Feulner PG, Smadja C, Galindo J, Ekblom R, Bennison C, Ball AD, Beckerman AP, Slate J. Adaptation genomics: the next generation. Trends in Ecology & Evolution. 25: 705-12. PMID 20952088 DOI: 10.1016/j.tree.2010.09.002  1
2010 Ekblom R, French L, Slate J, Burke T. Evolutionary analysis and expression profiling of zebra finch immune genes. Genome Biology and Evolution. 2: 781-790. PMID 20884724  1
2010 Rodríguez-Muñoz R, Bretman A, Slate J, Walling CA, Tregenza T. Natural and sexual selection in a wild insect population. Science (New York, N.Y.). 328: 1269-72. PMID 20522773 DOI: 10.1126/science.1188102  1
2010 Slate J, Santure AW, Feulner PG, Brown EA, Ball AD, Johnston SE, Gratten J. Genome mapping in intensively studied wild vertebrate populations. Trends in Genetics : Tig. 26: 275-84. PMID 20444518 DOI: 10.1016/j.tig.2010.03.005  1
2010 Gratten J, Wilson AJ, McRae AF, Beraldi D, Visscher PM, Pemberton JM, Slate J. No evidence for warming climate theory of coat colour change in Soay sheep: a comment on Maloney et al. Biology Letters. 6: 678-9; discussion 68. PMID 20375045 DOI: 10.1098/rsbl.2010.0160  1
2010 Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Künstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, ... ... Slate J, et al. The genome of a songbird. Nature. 464: 757-62. PMID 20360741 DOI: 10.1038/nature08819  1
2010 Ekblom R, Balakrishnan CN, Burke T, Slate J. Digital gene expression analysis of the zebra finch genome. Bmc Genomics. 11: 219. PMID 20359325 DOI: 10.1186/1471-2164-11-219  1
2010 Ball AD, Stapley J, Dawson DA, Birkhead TR, Burke T, Slate J. A comparison of SNPs and microsatellites as linkage mapping markers: lessons from the zebra finch (Taeniopygia guttata). Bmc Genomics. 11: 218. PMID 20359323 DOI: 10.1186/1471-2164-11-218  1
2010 Stapley J, Birkhead TR, Burke T, Slate J. Pronounced inter- and intrachromosomal variation in linkage disequilibrium across the zebra finch genome Genome Research. 20: 496-502. PMID 20357051 DOI: 10.1101/gr.102095.109  1
2010 Santure AW, Stapley J, Ball AD, Birkhead TR, Burke T, Slate J. On the use of large marker panels to estimate inbreeding and relatedness: empirical and simulation studies of a pedigreed zebra finch population typed at 771 SNPs. Molecular Ecology. 19: 1439-51. PMID 20149098 DOI: 10.1111/j.1365-294X.2010.04554.x  1
2010 Mossman JA, Slate J, Birkhead TR. Mitochondrial haplotype does not affect sperm velocity in the zebra finch Taeniopygia guttata Journal of Evolutionary Biology. 23: 422-432. PMID 20040001 DOI: 10.1111/j.1420-9101.2009.01913.x  1
2010 Slate J. Scrapie genetics before the discovery of prions Heredity. 104: 122-123. PMID 19707236 DOI: 10.1038/hdy.2009.113  1
2010 Johnston SE, Beraldi D, McRae AF, Pemberton JM, Slate J. Horn type and horn length genes map to the same chromosomal region in Soay sheep. Heredity. 104: 196-205. PMID 19690581 DOI: 10.1038/hdy.2009.109  1
2010 Gratten J, Pilkington JG, Brown EA, Beraldi D, Pemberton JM, Slate J. The genetic basis of recessive self-colour pattern in a wild sheep population. Heredity. 104: 206-14. PMID 19672282 DOI: 10.1038/hdy.2009.105  1
2009 Mossman J, Slate J, Humphries S, Birkhead T. Sperm morphology and velocity are genetically codetermined in the zebra finch. Evolution; International Journal of Organic Evolution. 63: 2730-7. PMID 19552737 DOI: 10.1111/j.1558-5646.2009.00753.x  1
2009 Chapman JR, Nakagawa S, Coltman DW, Slate J, Sheldon BC. A quantitative review of heterozygosity-fitness correlations in animal populations. Molecular Ecology. 18: 2746-65. PMID 19500255 DOI: 10.1111/j.1365-294X.2009.04247.x  1
2009 Snook RR, Brüstle L, Slate J. A test and review of the role of effective population size on experimental sexual selection patterns. Evolution; International Journal of Organic Evolution. 63: 1923-33. PMID 19473403 DOI: 10.1111/j.1558-5646.2009.00682.x  1
2009 Slate J. Bias in studies of heterozygosity and mate choice. Molecular Ecology. 18: 1815-7. PMID 19302362 DOI: 10.1111/j.1365-294X.2009.04115.x  1
2009 Slate J, Gratten J, Beraldi D, Stapley J, Hale M, Pemberton JM. Gene mapping in the wild with SNPs: guidelines and future directions. Genetica. 136: 97-107. PMID 18780148 DOI: 10.1007/s10709-008-9317-z  1
2008 Kenta T, Gratten J, Haigh NS, Hinten GN, Slate J, Butlin RK, Burke T. Multiplex SNP-SCALE: a cost-effective medium-throughput single nucleotide polymorphism genotyping method. Molecular Ecology Resources. 8: 1230-8. PMID 21586010 DOI: 10.1111/j.1755-0998.2008.02190.x  0.68
2008 Swarbrick PJ, Huang K, Liu G, Slate J, Press MC, Scholes JD. Global patterns of gene expression in rice cultivars undergoing a susceptible or resistant interaction with the parasitic plant Striga hermonthica. The New Phytologist. 179: 515-29. PMID 19086183 DOI: 10.1111/j.1469-8137.2008.02484.x  1
2008 Hale MC, Jensen H, Birkhead TR, Burke T, Slate J. A comparison of synteny and gene order on the homologue of chicken chromosome 7 between two passerine species and between passerines and chicken. Cytogenetic and Genome Research. 121: 120-9. PMID 18544935 DOI: 10.1159/000125837  1
2008 Stapley J, Birkhead TR, Burke T, Slate J. A linkage map of the zebra finch Taeniopygia guttata provides new insights into avian genome evolution. Genetics. 179: 651-67. PMID 18493078 DOI: 10.1534/genetics.107.086264  1
2008 Bacigalupe LD, Crudgington HS, Slate J, Moore AJ, Snook RR. Sexual selection and interacting phenotypes in experimental evolution: a study of Drosophila pseudoobscura mating behavior. Evolution; International Journal of Organic Evolution. 62: 1804-12. PMID 18410532 DOI: 10.1111/j.1558-5646.2008.00402.x  1
2008 Slate J. Robustness of linkage maps in natural populations: a simulation study. Proceedings. Biological Sciences / the Royal Society. 275: 695-702. PMID 18211883 DOI: 10.1098/rspb.2007.0948  1
2008 Gratten J, Wilson AJ, McRae AF, Beraldi D, Visscher PM, Pemberton JM, Slate J. A localized negative genetic correlation constrains microevolution of coat color in wild sheep. Science (New York, N.Y.). 319: 318-20. PMID 18202287 DOI: 10.1126/science.1151182  1
2008 Kruuk LEB, Slate J, Wilson AJ. New answers for old questions: The evolutionary quantitative genetics of wild animal populations Annual Review of Ecology, Evolution, and Systematics. 39: 525-548. DOI: 10.1146/annurev.ecolsys.39.110707.173542  1
2008 Kenta T, Gratten J, Haigh NS, Hinten GN, Slate J, Butlin RK, Burke T. Multiplex SNP-SCALE: A cost-effective medium-throughput single nucleotide polymorphism genotyping method Molecular Ecology Resources. 8: 1230-1238. DOI: 10.1111/j.1755-0998.2008.02190.x  1
2008 Lane JE, Boutin S, Gunn MR, Slate J, Coltman DW. Female multiple mating and paternity in free-ranging North American red squirrels Animal Behaviour. 75: 1927-1937. DOI: 10.1016/j.anbehav.2007.10.038  1
2007 Slate J, Pemberton JM. Admixture and patterns of linkage disequilibrium in a free-living vertebrate population Journal of Evolutionary Biology. 20: 1415-1427. PMID 17584236 DOI: 10.1111/j.1420-9101.2007.01339.x  1
2007 Beraldi D, McRae AF, Gratten J, Slate J, Visscher PM, Pemberton JM. Mapping quantitative trait Loci underlying fitness-related traits in a free-living sheep population. Evolution; International Journal of Organic Evolution. 61: 1403-16. PMID 17542849 DOI: 10.1111/j.1558-5646.2007.00106.x  1
2007 Dawson DA, Akesson M, Burke T, Pemberton JM, Slate J, Hansson B. Gene order and recombination rate in homologous chromosome regions of the chicken and a passerine bird. Molecular Biology and Evolution. 24: 1537-52. PMID 17434902 DOI: 10.1093/molbev/msm071  1
2007 Slate J, Hale MC, Birkhead TR. Simple sequence repeats in zebra finch (Taeniopygia guttata) expressed sequence tags: a new resource for evolutionary genetic studies of passerines. Bmc Genomics. 8: 52. PMID 17300727 DOI: 10.1186/1471-2164-8-52  1
2007 Gratten J, Beraldi D, Lowder BV, McRae AF, Visscher PM, Pemberton JM, Slate J. Compelling evidence that a single nucleotide substitution in TYRP1 is responsible for coat-colour polymorphism in a free-living population of Soay sheep. Proceedings. Biological Sciences / the Royal Society. 274: 619-26. PMID 17254985 DOI: 10.1098/rspb.2006.3762  1
2007 Beraldi D, McRae AF, Gratten J, Pilkington JG, Slate J, Visscher PM, Pemberton JM. Quantitative trait loci (QTL) mapping of resistance to strongyles and coccidia in the free-living Soay sheep (Ovis aries). International Journal For Parasitology. 37: 121-9. PMID 17067607 DOI: 10.1016/j.ijpara.2006.09.007  1
2007 Gunn MR, Hartnup K, Boutin S, Slate J, Coltman DW. A test of the efficacy of whole-genome amplification on DNA obtained from low-yield samples: Technical article Molecular Ecology Notes. 7: 393-399. DOI: 10.1111/j.1471-8286.2007.01696.x  1
2007 Hinten GN, Hale MC, Gratten J, Mossman JA, Lowder BV, Mann MK, Slate J. SNP-SCALE: SNP scoring by colour and length exclusion: Technical article Molecular Ecology Notes. 7: 377-388. DOI: 10.1111/j.1471-8286.2006.01648.x  1
2007 Lane JE, Boutin S, Gunn MR, Slate J, Coltman DW. Genetic relatedness of mates does not predict patterns of parentage in North American red squirrels Animal Behaviour. 74: 611-619. DOI: 10.1016/j.anbehav.2006.12.017  1
2006 Gemmell NJ, Slate J. Heterozygote advantage for fecundity. Plos One. 1: e125. PMID 17205129 DOI: 10.1371/journal.pone.0000125  1
2006 Slate J, Pemberton J. Does reduced heterozygosity depress sperm quality in wild rabbits (Oryctolagus cuniculus)? Current Biology : Cb. 16: R790-1; author reply. PMID 16979542 DOI: 10.1016/j.cub.2006.08.047  1
2006 Beraldi D, McRae AF, Gratten J, Slate J, Visscher PM, Pemberton JM. Development of a linkage map and mapping of phenotypic polymorphisms in a free-living population of Soay sheep (Ovis aries). Genetics. 173: 1521-37. PMID 16868121 DOI: 10.1534/genetics.106.057141  1
2006 Dawson DA, Burke T, Hansson B, Pandhal J, Hale MC, Hinten GN, Slate J. A predicted microsatellite map of the passerine genome based on chicken-passerine sequence similarity. Molecular Ecology. 15: 1299-320. PMID 16626455 DOI: 10.1111/j.1365-294X.2006.02803.x  1
2006 Gurney AL, Slate J, Press MC, Scholes JD. A novel form of resistance in rice to the angiosperm parasite Striga hermonthica. The New Phytologist. 169: 199-208. PMID 16390431 DOI: 10.1111/j.1469-8137.2005.01560.x  1
2006 Mossman JA, Birkhead TR, Slate J. The whole mitochondrial genome sequence of the zebra finch (Taeniopygia guttata) Molecular Ecology Notes. 6: 1222-1227. DOI: 10.1111/j.1471-8286.2006.01497.x  1
2005 Slate J. Molecular evolution of the sheep prion protein gene. Proceedings. Biological Sciences / the Royal Society. 272: 2371-7. PMID 16243700 DOI: 10.1098/rspb.2005.3259  1
2005 Hansson B, Akesson M, Slate J, Pemberton JM. Linkage mapping reveals sex-dimorphic map distances in a passerine bird. Proceedings. Biological Sciences / the Royal Society. 272: 2289-98. PMID 16191642 DOI: 10.1098/rspb.2005.3228  1
2005 Slate J. Quantitative trait locus mapping in natural populations: progress, caveats and future directions. Molecular Ecology. 14: 363-79. PMID 15660931 DOI: 10.1111/j.1365-294X.2004.02378.x  1
2005 Gunn MR, Dawson DA, Leviston A, Hartnup K, Davis CS, Strobeck C, Slate J, Coltman DW. Isolation of 18 polymorphic microsatellite loci from the North American red squirrel, Tamiasciurus hudsonicus (Sciuridae, Rodentia), and their cross-utility in other species Molecular Ecology Notes. 5: 650-653. DOI: 10.1111/j.1471-8286.2005.01022.x  1
2004 Slate J, David P, Dodds KG, Veenvliet BA, Glass BC, Broad TE, McEwan JC. Understanding the relationship between the inbreeding coefficient and multilocus heterozygosity: theoretical expectations and empirical data. Heredity. 93: 255-65. PMID 15254488 DOI: 10.1038/sj.hdy.6800485  1
2004 Slate J, Gemmell NJ. Eve 'n' Steve: Recombination of human mitochondrial DNA Trends in Ecology and Evolution. 19: 561-563. DOI: 10.1016/j.tree.2004.09.001  1
2003 Kruuk LE, Slate J, Pemberton JM, Clutton-Brock TH. Fluctuating asymmetry in a secondary sexual trait: no associations with individual fitness, environmental stress or inbreeding, and no heritability. Journal of Evolutionary Biology. 16: 101-13. PMID 14635885 DOI: 10.1046/j.1420-9101.2003.00503.x  1
2003 Coltman DW, Slate J. Microsatellite measures of inbreeding: a meta-analysis. Evolution; International Journal of Organic Evolution. 57: 971-83. PMID 12836816  1
2003 Slate J, Phua SH. Patterns of linkage disequilibrium in mitochondrial DNA of 16 ruminant populations. Molecular Ecology. 12: 597-608. PMID 12675816 DOI: 10.1046/j.1365-294X.2003.01765.x  1
2002 Slate J, Visscher PM, MacGregor S, Stevens D, Tate ML, Pemberton JM. A genome scan for quantitative trait loci in a wild population of red deer (Cervus elaphus). Genetics. 162: 1863-73. PMID 12524355  1
2002 Kruuk EB, Slate J, Pemberton JM, Brotherstone S, Guinness F, Clutton-Brock T. Antler size in red deer: heritability and selection but no evolution. Evolution; International Journal of Organic Evolution. 56: 1683-95. PMID 12353761  1
2002 Marshall TC, Coltman DW, Pemberton JM, Slate J, Spalton JA, Guinness FE, Smith JA, Pilkington JG, Clutton-Brock TH. Estimating the prevalence of inbreeding from incomplete pedigrees. Proceedings. Biological Sciences / the Royal Society. 269: 1533-9. PMID 12184822 DOI: 10.1098/rspb.2002.2035  1
2002 Slate J, Van Stijn TC, Anderson RM, McEwan KM, Maqbool NJ, Mathias HC, Bixley MJ, Stevens DR, Molenaar AJ, Beever JE, Galloway SM, Tate ML. A deer (subfamily Cervinae) genetic linkage map and the evolution of ruminant genomes. Genetics. 160: 1587-97. PMID 11973312  1
2002 McRae AF, McEwan JC, Dodds KG, Wilson T, Crawford AM, Slate J. Linkage disequilibrium in domestic sheep. Genetics. 160: 1113-22. PMID 11901127  1
2002 Slate J, Pemberton JM. Comparing molecular measures for detecting inbreeding depression Journal of Evolutionary Biology. 15: 20-31. DOI: 10.1046/j.1420-9101.2002.00373.x  1
2000 Slate J, Kruuk LE, Marshall TC, Pemberton JM, Clutton-Brock TH. Inbreeding depression influences lifetime breeding success in a wild population of red deer (Cervus elaphus). Proceedings. Biological Sciences / the Royal Society. 267: 1657-62. PMID 11467429 DOI: 10.1098/rspb.2000.1192  1
2000 Kruuk LE, Clutton-Brock TH, Slate J, Pemberton JM, Brotherstone S, Guinness FE. Heritability of fitness in a wild mammal population. Proceedings of the National Academy of Sciences of the United States of America. 97: 698-703. PMID 10639142 DOI: 10.1073/pnas.97.2.698  1
1999 Slate J, Pemberton JM, Visscher PM. Power to detect QTL in a free-living polygynous population. Heredity. 83: 327-36. PMID 10504431  1
1998 Slate J, Coltman DW, Goodman SJ, MacLean I, Pemberton JM, Williams JL. Bovine microsatellite loci are highly conserved in red deer (Cervus elaphus), sika deer (Cervus nippon) and Soay sheep (Ovis aries). Animal Genetics. 29: 307-15. PMID 9745670 DOI: 10.1046/j.1365-2052.1998.00347.x  1
1998 Marshall TC, Slate J, Kruuk LE, Pemberton JM. Statistical confidence for likelihood-based paternity inference in natural populations. Molecular Ecology. 7: 639-55. PMID 9633105 DOI: 10.1046/j.1365-294x.1998.00374.x  1
1998 Coulson TN, Pemberton JM, Albon SD, Beaumont M, Marshall TC, Slate J, Guinness FE, Clutton-Brock TH. Microsatellites reveal heterosis in red deer. Proceedings. Biological Sciences / the Royal Society. 265: 489-95. PMID 9569667 DOI: 10.1098/rspb.1998.0321  1
1996 Pemberton JM, Smith JA, Coulson TN, Marshall TC, Slate J, Paterson S, Albon SD, Clutton-Brock TH. The maintenance of genetic polymorphism in small island populations: large mammals in the Hebrides. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 351: 745-52. PMID 8693018 DOI: 10.1098/rstb.1996.0069  1
1995 Pemberton JM, Slate J, Bancroft DR, Barrett JA. Nonamplifying alleles at microsatellite loci: a caution for parentage and population studies. Molecular Ecology. 4: 249-52. PMID 7735527  1
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