| Year |
Citation |
Score |
| 2023 |
Behr JH, Kampouris ID, Babin D, Sommermann L, Francioli D, Kuhl-Nagel T, Chowdhury SP, Geistlinger J, Smalla K, Neumann G, Grosch R. Beneficial microbial consortium improves winter rye performance by modulating bacterial communities in the rhizosphere and enhancing plant nutrient acquisition. Frontiers in Plant Science. 14: 1232288. PMID 37711285 DOI: 10.3389/fpls.2023.1232288 |
0.437 |
|
| 2023 |
Smalla K, Kabisch J, Fiedler G, Hammerl JA, Tenhagen BA. [Health risks from crop irrigation with treated wastewater containing antibiotic residues, resistance genes, and resistant microorganisms]. Bundesgesundheitsblatt, Gesundheitsforschung, Gesundheitsschutz. PMID 37233812 DOI: 10.1007/s00103-023-03710-7 |
0.306 |
|
| 2022 |
Dumack K, Feng K, Flues S, Sapp M, Schreiter S, Grosch R, Rose LE, Deng Y, Smalla K, Bonkowski M. What Drives the Assembly of Plant-associated Protist Microbiomes? Investigating the Effects of Crop Species, Soil Type and Bacterial Microbiomes. Protist. 173: 125913. PMID 36257252 DOI: 10.1016/j.protis.2022.125913 |
0.463 |
|
| 2022 |
Sommermann L, Babin D, Behr JH, Chowdhury SP, Sandmann M, Windisch S, Neumann G, Nesme J, Sørensen SJ, Schellenberg I, Rothballer M, Geistlinger J, Smalla K, Grosch R. Long-Term Fertilization Strategy Impacts -Microbe Interactions in Soil and Rhizosphere and Defense Responses in Lettuce. Microorganisms. 10. PMID 36144319 DOI: 10.3390/microorganisms10091717 |
0.453 |
|
| 2022 |
Bziuk N, Maccario L, Sørensen SJ, Schikora A, Smalla K. Barley Rhizosphere Microbiome Transplantation - A Strategy to Decrease Susceptibility of Barley Grown in Soils With Low Microbial Diversity to Powdery Mildew. Frontiers in Microbiology. 13: 830905. PMID 35685930 DOI: 10.3389/fmicb.2022.830905 |
0.444 |
|
| 2022 |
Wolters B, Hauschild K, Blau K, Mulder I, Heyde BJ, Sørensen SJ, Siemens J, Jechalke S, Smalla K, Nesme J. Biosolids for safe land application: does wastewater treatment plant size matters when considering antibiotics, pollutants, microbiome, mobile genetic elements and associated resistance genes? Environmental Microbiology. PMID 35192222 DOI: 10.1111/1462-2920.15938 |
0.404 |
|
| 2021 |
Dunon V, Holmsgaard PN, Dealtry S, Lavigne R, Sørensen S, Smalla K, Top E, Springael D. Long range PCR reveals the genetic cargo of IncP-1 plasmids in the complex microbial community of an on-farm biopurification system treating pesticide contaminated wastewater. Applied and Environmental Microbiology. AEM0164821. PMID 34878814 DOI: 10.1128/AEM.01648-21 |
0.338 |
|
| 2021 |
Bziuk N, Maccario L, Straube B, Wehner G, Sørensen SJ, Schikora A, Smalla K. The treasure inside barley seeds: microbial diversity and plant beneficial bacteria. Environmental Microbiome. 16: 20. PMID 34711269 DOI: 10.1186/s40793-021-00389-8 |
0.303 |
|
| 2021 |
Elsayed TR, Grosch R, Smalla K. Potato plant spheres and to a lesser extent the soil type influence the proportion and diversity of bacterial isolates with in vitro antagonistic activity towards Ralstonia solanacearum. Fems Microbiology Ecology. PMID 33674848 DOI: 10.1093/femsec/fiab038 |
0.449 |
|
| 2021 |
Gebauer L, Bouffaud ML, Ganther M, Yim B, Vetterlein D, Smalla K, Buscot F, Heintz-Buschart A, Tarkka MT. Soil Texture, Sampling Depth and Root Hairs Shape the Structure of ACC Deaminase Bacterial Community Composition in Maize Rhizosphere. Frontiers in Microbiology. 12: 616828. PMID 33613486 DOI: 10.3389/fmicb.2021.616828 |
0.443 |
|
| 2021 |
Balbín-Suárez A, Jacquiod S, Rohr AD, Liu B, Flachowsky H, Winkelmann T, Beerhues L, Nesme J, Sørensen SJ, Vetterlein D, Smalla K. Root exposure to apple replant disease soil triggers local defense response and rhizoplane microbiome dysbiosis. Fems Microbiology Ecology. PMID 33587112 DOI: 10.1093/femsec/fiab031 |
0.413 |
|
| 2021 |
Babin D, Sommermann L, Chowdhury SP, Behr JH, Sandmann M, Neumann G, Nesme J, Sørensen SJ, Schellenberg I, Rothballer M, Geistlinger J, Smalla K, Grosch R. Distinct rhizomicrobiota assemblages and plant performance in lettuce grown in soils with different agricultural management histories. Fems Microbiology Ecology. PMID 33571366 DOI: 10.1093/femsec/fiab027 |
0.416 |
|
| 2021 |
Gabbarini LA, Figuerola E, Frene JP, Robledo NB, Ibarbalz FM, Babin D, Smalla K, Erijman L, Wall LG. Impacts of switching tillage to no-tillage and vice versa on soil structure, enzyme activities and prokaryotic community profiles in Argentinean semi-arid soils. Fems Microbiology Ecology. 97. PMID 33571359 DOI: 10.1093/femsec/fiab025 |
0.376 |
|
| 2021 |
Cerecetto V, Smalla K, Nesme J, Garaycochea S, Fresia P, Sørensen SJ, Babin D, Leoni C. Reduced tillage, cover crops and organic amendments affect soil microbiota and improve soil health in Uruguayan vegetable farming systems. Fems Microbiology Ecology. PMID 33547893 DOI: 10.1093/femsec/fiab023 |
0.396 |
|
| 2021 |
Bziuk N, Maccario L, Douchkov D, Lueck S, Babin D, Sørensen SJ, Schikora A, Smalla K. Tillage shapes the soil and rhizosphere microbiome of barley - but not its susceptibility towards Blumeria graminis f. sp. hordei. Fems Microbiology Ecology. PMID 33544837 DOI: 10.1093/femsec/fiab018 |
0.452 |
|
| 2021 |
Fernandez-Gnecco G, Smalla K, Maccario L, Sørensen SJ, Barbieri P, Consolo VF, Covacevich F, Babin D. Microbial community analysis of soils under different soybean cropping regimes in the Argentinean south-eastern Humid Pampas. Fems Microbiology Ecology. PMID 33444447 DOI: 10.1093/femsec/fiab007 |
0.43 |
|
| 2020 |
Windisch S, Sommermann L, Babin D, Chowdhury SP, Grosch R, Moradtalab N, Walker F, Höglinger B, El-Hasan A, Armbruster W, Nesme J, Sørensen SJ, Schellenberg I, Geistlinger J, Smalla K, et al. Impact of Long-Term Organic and Mineral Fertilization on Rhizosphere Metabolites, Root-Microbial Interactions and Plant Health of Lettuce. Frontiers in Microbiology. 11: 597745. PMID 33519736 DOI: 10.3389/fmicb.2020.597745 |
0.375 |
|
| 2020 |
Shintani M, Nour E, Elsayed T, Blau K, Wall I, Jechalke S, Spröer C, Bunk B, Overmann J, Smalla K. Plant Species-Dependent Increased Abundance and Diversity of IncP-1 Plasmids in the Rhizosphere: New Insights Into Their Role and Ecology. Frontiers in Microbiology. 11: 590776. PMID 33329469 DOI: 10.3389/fmicb.2020.590776 |
0.435 |
|
| 2020 |
Balbín-Suárez A, Lucas M, Vetterlein D, Sørensen SJ, Winkelmann T, Smalla K, Jacquiod S. Exploring microbial determinants of apple replant disease (ARD): A microhabitat approach under split-root design. Fems Microbiology Ecology. PMID 33045057 DOI: 10.1093/femsec/fiaa211 |
0.442 |
|
| 2020 |
Yim B, Baumann A, Grunewaldt-Stöcker G, Liu B, Beerhues L, Zühlke S, Sapp M, Nesme J, Sørensen SJ, Smalla K, Winkelmann T. Rhizosphere microbial communities associated to rose replant disease: links to plant growth and root metabolites. Horticulture Research. 7: 144. PMID 32922816 DOI: 10.1038/S41438-020-00365-2 |
0.549 |
|
| 2020 |
Ganther M, Yim B, Ibrahim Z, Bienert MD, Lippold E, Maccario L, Sørensen SJ, Bienert GP, Vetterlein D, Heintz-Buschart A, Blagodatskaya E, Smalla K, Tarkka MT. Compatibility of X-ray computed tomography with plant gene expression profiling, rhizosphere bacterial community composition and enzyme activity analyses. Journal of Experimental Botany. PMID 32463450 DOI: 10.1093/Jxb/Eraa262 |
0.326 |
|
| 2020 |
Schierstaedt J, Jechalke S, Nesme J, Neuhaus K, Sørensen SJ, Grosch R, Smalla K, Schikora A. Salmonella persistence in soil depends on reciprocal interactions with indigenous microorganisms. Environmental Microbiology. PMID 32128943 DOI: 10.1111/1462-2920.14972 |
0.505 |
|
| 2020 |
Blau K, Jechalke S, Smalla K. Detection, Isolation, and Characterization of Plasmids in the Environment. Methods in Molecular Biology (Clifton, N.J.). 2075: 39-60. PMID 31584153 DOI: 10.1007/978-1-4939-9877-7_3 |
0.507 |
|
| 2020 |
Zethof JHT, Bettermann A, Vogel C, Babin D, Cammeraat ELH, Solé-Benet A, Lázaro R, Luna L, Nesme J, Woche SK, Sørensen SJ, Smalla K, Kalbitz K. Prokaryotic Community Composition and Extracellular Polymeric Substances Affect Soil Microaggregation in Carbonate Containing Semiarid Grasslands Frontiers in Environmental Science. 8. DOI: 10.3389/Fenvs.2020.00051 |
0.531 |
|
| 2019 |
Reid CJ, Blau K, Jechalke S, Smalla K, Djordjevic SP. Whole Genome Sequencing of From Store-Bought Produce. Frontiers in Microbiology. 10: 3050. PMID 32063888 DOI: 10.3389/Fmicb.2019.03050 |
0.342 |
|
| 2019 |
Elsayed TR, Jacquiod S, Nour EH, Sørensen SJ, Smalla K. Biocontrol of Bacterial Wilt Disease Through Complex Interaction Between Tomato Plant, Antagonists, the Indigenous Rhizosphere Microbiota, and . Frontiers in Microbiology. 10: 2835. PMID 31998244 DOI: 10.3389/Fmicb.2019.02835 |
0.465 |
|
| 2019 |
Allegrini M, Gomez EDV, Smalla K, Zabaloy MC. Suppression treatment differentially influences the microbial community and the occurrence of broad host range plasmids in the rhizosphere of the model cover crop Avena sativa L. Plos One. 14: e0223600. PMID 31596877 DOI: 10.1371/Journal.Pone.0223600 |
0.519 |
|
| 2019 |
Eltlbany N, Baklawa M, Guochun D, Nassal D, Weber N, Kandeler E, Neumann G, Ludewig U, van Overbeek L, Smalla K. Enhanced tomato plant growth in soil under reduced P supply through microbial inoculants and microbiome shifts. Fems Microbiology Ecology. PMID 31386159 DOI: 10.1093/Femsec/Fiz124 |
0.531 |
|
| 2019 |
Kuzmanović N, Behrens P, Idczak E, Wagner S, Goetz M, Spröer C, Bunk B, Overmann J, Smalla K. A novel group of Rhizobium tumorigenes-like agrobacteria associated with crown gall disease of rhododendron and blueberry. Phytopathology. PMID 31294681 DOI: 10.1094/Phyto-05-19-0167-R |
0.385 |
|
| 2019 |
Szoboszlay M, Näther A, Liu B, Carrillo A, Castellanos T, Smalla K, Jia Z, Tebbe CC. Contrasting microbial community responses to salinization and straw amendment in a semiarid bare soil and its wheat rhizosphere. Scientific Reports. 9: 9795. PMID 31278291 DOI: 10.1038/S41598-019-46070-6 |
0.53 |
|
| 2019 |
González-Plaza JJ, Blau K, Milaković M, Jurina T, Smalla K, Udiković-Kolić N. Antibiotic-manufacturing sites are hot-spots for the release and spread of antibiotic resistance genes and mobile genetic elements in receiving aquatic environments. Environment International. 130: 104735. PMID 31260930 DOI: 10.1016/J.Envint.2019.04.007 |
0.367 |
|
| 2019 |
Jechalke S, Schierstaedt J, Becker M, Flemer B, Grosch R, Smalla K, Schikora A. Establishment in Agricultural Soil and Colonization of Crop Plants Depend on Soil Type and Plant Species. Frontiers in Microbiology. 10: 967. PMID 31156568 DOI: 10.3389/Fmicb.2019.00967 |
0.525 |
|
| 2019 |
Blau K, Jacquiod S, Sørensen SJ, Su JQ, Zhu YG, Smalla K, Jechalke S. Manure and Doxycycline Affect the Bacterial Community and Its Resistome in Lettuce Rhizosphere and Bulk Soil. Frontiers in Microbiology. 10: 725. PMID 31057496 DOI: 10.3389/Fmicb.2019.00725 |
0.56 |
|
| 2019 |
Paul Chowdhury S, Babin D, Sandmann M, Jacquiod S, Sommermann L, Sørensen SJ, Fliessbach A, Mäder P, Geistlinger J, Smalla K, Rothballer M, Grosch R. Effect of long-term organic and mineral fertilization strategies on rhizosphere microbiota assemblage and performance of lettuce. Environmental Microbiology. PMID 30990945 DOI: 10.1111/1462-2920.14631 |
0.516 |
|
| 2019 |
Milaković M, Vestergaard G, González-Plaza JJ, Petrić I, Šimatović A, Senta I, Kublik S, Schloter M, Smalla K, Udiković-Kolić N. Pollution from azithromycin-manufacturing promotes macrolide-resistance gene propagation and induces spatial and seasonal bacterial community shifts in receiving river sediments. Environment International. 123: 501-511. PMID 30622075 DOI: 10.1016/J.Envint.2018.12.050 |
0.403 |
|
| 2019 |
Lottmann J, Heuer H, De Vries J, Mahn A, Düring K, Wackernagel W, Smalla K, Berg G. Establishment of introduced antagonistic bacteria in the rhizosphere of transgenic potatoes and their effect on the bacterial community. Fems Microbiology Ecology. 33: 41-49. PMID 10922502 DOI: 10.1111/J.1574-6941.2000.Tb00725.X |
0.44 |
|
| 2019 |
Babin D, Deubel A, Jacquiod S, Sørensen SJ, Geistlinger J, Grosch R, Smalla K. Impact of long-term agricultural management practices on soil prokaryotic communities Soil Biology and Biochemistry. 129: 17-28. DOI: 10.1016/J.Soilbio.2018.11.002 |
0.518 |
|
| 2018 |
Blau K, Bettermann A, Jechalke S, Fornefeld E, Vanrobaeys Y, Stalder T, Top EM, Smalla K. The Transferable Resistome of Produce. Mbio. 9. PMID 30401772 DOI: 10.1128/Mbio.01300-18 |
0.415 |
|
| 2018 |
Lucas M, Balbín-Suárez A, Smalla K, Vetterlein D. Root growth, function and rhizosphere microbiome analyses show local rather than systemic effects in apple plant response to replant disease soil. Plos One. 13: e0204922. PMID 30296282 DOI: 10.1371/Journal.Pone.0204922 |
0.521 |
|
| 2018 |
Wolters B, Fornefeld E, Jechalke S, Su JQ, Zhu YG, Sørensen SJ, Smalla K, Jacquiod S. Soil amendment with sewage sludge affects soil prokaryotic community composition, mobilome and resistome. Fems Microbiology Ecology. PMID 30295723 DOI: 10.1093/Femsec/Fiy193 |
0.549 |
|
| 2018 |
Smalla K, Cook K, Djordjevic SP, Klümper U, Gillings M. Environmental dimensions of antibiotic resistance: Assessment of basic science gaps. Fems Microbiology Ecology. PMID 30277517 DOI: 10.1093/Femsec/Fiy195 |
0.315 |
|
| 2018 |
Golanowska M, Potrykus M, Motyka-Pomagruk A, Kabza M, Bacci G, Galardini M, Bazzicalupo M, Makalowska I, Smalla K, Mengoni A, Hugouvieux-Cotte-Pattat N, Lojkowska E. Comparison of Highly and Weakly Virulent Strains, With a View on the Pangenome and Panregulon of This Species. Frontiers in Microbiology. 9: 1940. PMID 30233505 DOI: 10.3389/Fmicb.2018.01940 |
0.343 |
|
| 2018 |
Winkelmann T, Smalla K, Amelung W, Baab G, Grunewaldt-Stöcker G, Kanfra X, Meyhöfer R, Reim S, Schmitz M, Vetterlein D, Wrede A, Zühlke S, Grunewaldt J, Weiß S, Schloter M. Apple Replant Disease: Causes and Mitigation Strategies. Current Issues in Molecular Biology. 30: 89-106. PMID 30070653 DOI: 10.21775/Cimb.030.089 |
0.483 |
|
| 2018 |
Schierstaedt J, Bziuk N, Kuzmanović N, Blau K, Smalla K, Jechalke S. Role of Plasmids in Plant-Bacteria Interactions. Current Issues in Molecular Biology. 30: 17-38. PMID 30070649 DOI: 10.21775/Cimb.030.017 |
0.42 |
|
| 2018 |
Kuzmanović N, Eltlbany N, Guochun D, Baklawa M, Min L, Wei L, Smalla K. Analysis of the genome sequence of plant beneficial strain Pseudomonas sp. RU47. Journal of Biotechnology. PMID 30031092 DOI: 10.1016/J.Jbiotec.2018.07.023 |
0.426 |
|
| 2018 |
Kuzmanović N, Smalla K, Gronow S, Puławska J. Rhizobium tumorigenes sp. nov., a novel plant tumorigenic bacterium isolated from cane gall tumors on thornless blackberry. Scientific Reports. 8: 9051. PMID 29899540 DOI: 10.1038/S41598-018-27485-Z |
0.367 |
|
| 2018 |
Dealtry S, Ghizelini AM, Mendonça-Hagler LCS, Chaloub RM, Reinert F, Campos TMP, Gomes NCM, Smalla K. Petroleum contamination and bioaugmentation in bacterial rhizosphere communities from Avicennia schaueriana. Brazilian Journal of Microbiology : [Publication of the Brazilian Society For Microbiology]. PMID 29866608 DOI: 10.1016/J.Bjm.2018.02.012 |
0.767 |
|
| 2018 |
Larsson DGJ, Andremont A, Bengtsson-Palme J, Brandt KK, de Roda Husman AM, Fagerstedt P, Fick J, Flach CF, Gaze WH, Kuroda M, Kvint K, Laxminarayan R, Manaia CM, Nielsen KM, Plant L, ... ... Smalla K, et al. Critical knowledge gaps and research needs related to the environmental dimensions of antibiotic resistance. Environment International. 117: 132-138. PMID 29747082 DOI: 10.1016/J.Envint.2018.04.041 |
0.303 |
|
| 2018 |
Wolters B, Jacquiod SJA, Sørensen SJ, Widyasari-Mehta A, Bech TB, Kreuzig R, Smalla K. Bulk soil and maize rhizosphere resistance genes, mobile genetic elements and microbial communities are differently impacted by organic and inorganic fertilization. Fems Microbiology Ecology. PMID 29462310 DOI: 10.1093/Femsec/Fiy027 |
0.548 |
|
| 2018 |
Schreiter S, Babin D, Smalla K, Grosch R. Rhizosphere Competence and Biocontrol Effect ofsp. RU47 Independent from Plant Species and Soil Type at the Field Scale. Frontiers in Microbiology. 9: 97. PMID 29449832 DOI: 10.3389/Fmicb.2018.00097 |
0.572 |
|
| 2018 |
Kuzmanović N, Puławska J, Smalla K, Nesme X. Agrobacterium rosae sp. nov., isolated from galls on different agricultural crops. Systematic and Applied Microbiology. PMID 29426637 DOI: 10.1016/J.Syapm.2018.01.004 |
0.314 |
|
| 2018 |
Fornefeld E, Baklawa M, Hallmann J, Schikora A, Smalla K. Sewage sludge amendment and inoculation with plant-parasitic nematodes do not facilitate the internalization of Salmonella Typhimurium LT2 in lettuce plants. Food Microbiology. 71: 111-119. PMID 29366460 DOI: 10.1016/J.Fm.2017.06.011 |
0.511 |
|
| 2018 |
Lehmann K, Schaefer S, Babin D, Köhne JM, Schlüter S, Smalla K, Vogel H, Totsche KU. Selective transport and retention of organic matter and bacteria shapes initial pedogenesis in artificial soil - A two-layer column study Geoderma. 325: 37-48. DOI: 10.1016/J.Geoderma.2018.03.016 |
0.421 |
|
| 2018 |
Koch E, Ole Becker J, Berg G, Hauschild R, Jehle J, Köhl J, Smalla K. Biocontrol of plant diseases is not an unsafe technology! Journal of Plant Diseases and Protection. 125: 121-125. DOI: 10.1007/S41348-018-0158-4 |
0.35 |
|
| 2018 |
Touceda-González M, Kidd PS, Smalla K, Prieto-Fernández A. Bacterial communities in the rhizosphere of different populations of the Ni-hyperaccumulator Alyssum serpyllifolium and the metal-excluder Dactylis glomerata growing in ultramafic soils Plant and Soil. 431: 317-332. DOI: 10.1007/S11104-018-3767-6 |
0.545 |
|
| 2017 |
Garbisu C, Garaiyurrebaso O, Lanzén A, Álvarez-Rodríguez I, Arana L, Blanco F, Smalla K, Grohmann E, Alkorta I. Mobile genetic elements and antibiotic resistance in mine soil amended with organic wastes. The Science of the Total Environment. 621: 725-733. PMID 29207350 DOI: 10.1016/J.Scitotenv.2017.11.221 |
0.457 |
|
| 2017 |
Blau K, Casadevall L, Wolters B, Van den Meersche T, Kreuzig R, Smalla K, Jechalke S. Soil texture-depending effects of doxycycline and streptomycin applied with manure on the bacterial community composition and resistome. Fems Microbiology Ecology. PMID 29087461 DOI: 10.1093/Femsec/Fix145 |
0.545 |
|
| 2017 |
Yim B, Nitt H, Wrede A, Jacquiod S, Sørensen SJ, Winkelmann T, Smalla K. Effects of Soil Pre-Treatment with Basamid® Granules, Brassica juncea, Raphanus sativus, and Tagetes patula on Bacterial and Fungal Communities at Two Apple Replant Disease Sites. Frontiers in Microbiology. 8: 1604. PMID 28919882 DOI: 10.3389/Fmicb.2017.01604 |
0.538 |
|
| 2017 |
Holmsgaard PN, Dealtry S, Dunon V, Heuer H, Hansen LH, Springael D, Smalla K, Riber L, Sørensen SJ. Response of the bacterial community in an on-farm biopurification system, to which diverse pesticides are introduced over an agricultural season. Environmental Pollution (Barking, Essex : 1987). PMID 28734695 DOI: 10.1016/J.Envpol.2017.07.026 |
0.468 |
|
| 2017 |
Fornefeld E, Schierstaedt J, Jechalke S, Grosch R, Schikora A, Smalla K. Persistence of Salmonella Typhimurium LT2 in Soil Enhanced after Growth in Lettuce Medium. Frontiers in Microbiology. 8: 757. PMID 28503171 DOI: 10.3389/Fmicb.2017.00757 |
0.481 |
|
| 2017 |
Berg G, Köberl M, Rybakova D, Müller H, Grosch R, Smalla K. Plant microbial diversity is suggested as the key to future biocontrol and health trends. Fems Microbiology Ecology. PMID 28430944 DOI: 10.1093/Femsec/Fix050 |
0.373 |
|
| 2017 |
Nour EH, Elsayed TR, Springael D, Smalla K. Comparable dynamics of linuron catabolic genes and IncP-1 plasmids in biopurification systems (BPSs) as a response to linuron spiking. Applied Microbiology and Biotechnology. PMID 28235988 DOI: 10.1007/S00253-017-8135-6 |
0.401 |
|
| 2017 |
Antweiler K, Schreiter S, Keilwagen J, Baldrian P, Kropf S, Smalla K, Grosch R, Heuer H. Statistical test for tolerability of effects of an antifungal biocontrol strain on fungal communities in three arable soils. Microbial Biotechnology. PMID 28111906 DOI: 10.1111/1751-7915.12595 |
0.507 |
|
| 2017 |
Windisch S, Bott S, Ohler M, Mock H, Lippmann R, Grosch R, Smalla K, Ludewig U, Neumann G. Rhizoctonia solani and Bacterial Inoculants Stimulate Root Exudation of Antifungal Compounds in Lettuce in a Soil-Type Specific Manner Agronomy. 7: 44. DOI: 10.3390/Agronomy7020044 |
0.496 |
|
| 2017 |
Mulder I, Siemens J, Sentek V, Amelung W, Smalla K, Jechalke S. Quaternary ammonium compounds in soil: implications for antibiotic resistance development Reviews in Environmental Science and Bio/Technology. 17: 159-185. DOI: 10.1007/S11157-017-9457-7 |
0.459 |
|
| 2017 |
Nassal D, Spohn M, Eltlbany N, Jacquiod S, Smalla K, Marhan S, Kandeler E. Effects of phosphorus-mobilizing bacteria on tomato growth and soil microbial activity Plant and Soil. 427: 17-37. DOI: 10.1007/S11104-017-3528-Y |
0.495 |
|
| 2017 |
Pronk GJ, Heister K, Vogel C, Babin D, Bachmann J, Ding G, Ditterich F, Gerzabek MH, Giebler J, Hemkemeyer M, Kandeler E, Mouvenchery YK, Miltner A, Poll C, Schaumann GE, ... Smalla K, et al. Interaction of minerals, organic matter, and microorganisms during biogeochemical interface formation as shown by a series of artificial soil experiments Biology and Fertility of Soils. 53: 9-22. DOI: 10.1007/S00374-016-1161-1 |
0.466 |
|
| 2016 |
Garaiyurrebaso O, Garbisu C, Blanco F, Lanzén A, Martín I, Epelde L, Becerril JM, Jechalke S, Smalla K, Grohmann E, Alkorta I. Long-term effects of aided phytostabilization on microbial communities of metal-contaminated mine soil. Fems Microbiology Ecology. PMID 28011599 DOI: 10.1093/Femsec/Fiw252 |
0.456 |
|
| 2016 |
Wolters B, Widyasari-Mehta A, Kreuzig R, Smalla K. Contaminations of organic fertilizers with antibiotic residues, resistance genes, and mobile genetic elements mirroring antibiotic use in livestock? Applied Microbiology and Biotechnology. PMID 27522197 DOI: 10.1007/S00253-016-7742-Y |
0.492 |
|
| 2016 |
Sessitsch A, Smalla K, Johnson L, Mitter B. Special thematic issue on microbe-assisted crop production. Fems Microbiology Ecology. PMID 27495243 DOI: 10.1093/Femsec/Fiw167 |
0.373 |
|
| 2016 |
Kyselková M, Chrudimský T, Husník F, Chroňáková A, Heuer H, Smalla K, Elhottová D. Characterization of tet(Y)-carrying LowGC plasmids exogenously captured from cow manure at a conventional dairy farm. Fems Microbiology Ecology. PMID 27083193 DOI: 10.1093/Femsec/Fiw075 |
0.482 |
|
| 2016 |
Jechalke S, Radl V, Schloter M, Heuer H, Smalla K. Do drying and rewetting cycles modulate effects of sulfadiazine spiked manure in soil? Fems Microbiology Ecology. 92. PMID 27053757 DOI: 10.1093/Femsec/Fiw066 |
0.542 |
|
| 2016 |
Wolters B, Ding GC, Kreuzig R, Smalla K. Full-scale mesophilic biogas plants using manure as C-source: bacterial community shifts along the process cause changes in the abundance of resistance genes and mobile genetic elements. Fems Microbiology Ecology. PMID 26772986 DOI: 10.1093/Femsec/Fiv163 |
0.529 |
|
| 2016 |
Yim B, Hanschen FS, Wrede A, Nitt H, Schreiner M, Smalla K, Winkelmann T. Effects of biofumigation using Brassica juncea and Raphanus sativus in comparison to disinfection using Basamid on apple plant growth and soil microbial communities at three field sites with replant disease Plant and Soil. 406: 389-408. DOI: 10.1007/S11104-016-2876-3 |
0.549 |
|
| 2016 |
Chessa L, Jechalke S, Ding GC, Pusino A, Mangia NP, Smalla K. The presence of tetracycline in cow manure changes the impact of repeated manure application on soil bacterial communities Biology and Fertility of Soils. 1-14. DOI: 10.1007/S00374-016-1150-4 |
0.535 |
|
| 2015 |
Dealtry S, Nour EH, Holmsgaard PN, Ding GC, Weichelt V, Dunon V, Heuer H, Hansen LH, Sørensen SJ, Springael D, Smalla K. Exploring the complex response to linuron of bacterial communities from biopurification systems by means of cultivation-independent methods. Fems Microbiology Ecology. PMID 26705572 DOI: 10.1093/Femsec/Fiv157 |
0.497 |
|
| 2015 |
Yim B, Winkelmann T, Ding GC, Smalla K. Different bacterial communities in heat and gamma irradiation treated replant disease soils revealed by 16S rRNA gene analysis - contribution to improved aboveground apple plant growth? Frontiers in Microbiology. 6: 1224. PMID 26635733 DOI: 10.3389/Fmicb.2015.01224 |
0.562 |
|
| 2015 |
Fuentes S, Ding GC, Cárdenas F, Smalla K, Seeger M. Assessing environmental drivers of microbial communities in estuarine soils of the Aconcagua River in Central Chile. Fems Microbiology Ecology. 91. PMID 26362923 DOI: 10.1093/Femsec/Fiv110 |
0.516 |
|
| 2015 |
Hanschen FS, Yim B, Winkelmann T, Smalla K, Schreiner M. Degradation of Biofumigant Isothiocyanates and Allyl Glucosinolate in Soil and Their Effects on the Microbial Community Composition. Plos One. 10: e0132931. PMID 26186695 DOI: 10.1371/Journal.Pone.0132931 |
0.513 |
|
| 2015 |
Flach CF, Johnning A, Nilsson I, Smalla K, Kristiansson E, Larsson DG. Isolation of novel IncA/C and IncN fluoroquinolone resistance plasmids from an antibiotic-polluted lake. The Journal of Antimicrobial Chemotherapy. 70: 2709-17. PMID 26124213 DOI: 10.1093/Jac/Dkv167 |
0.341 |
|
| 2015 |
Smalla K, Jechalke S, Top EM. Plasmid Detection, Characterization, and Ecology. Microbiology Spectrum. 3: PLAS-0038-2014. PMID 26104560 DOI: 10.1128/Microbiolspec.Plas-0038-2014 |
0.44 |
|
| 2015 |
Martini MC, Albicoro FJ, Nour E, Schlüter A, van Elsas JD, Springael D, Smalla K, Pistorio M, Lagares A, Del Papa MF. Characterization of a collection of plasmid-containing bacteria isolated from an on-farm biopurification system used for pesticide removal. Plasmid. PMID 25957823 DOI: 10.1016/j.plasmid.2015.05.001 |
0.365 |
|
| 2015 |
Jechalke S, Broszat M, Lang F, Siebe C, Smalla K, Grohmann E. Effects of 100 years wastewater irrigation on resistance genes, class 1 integrons and IncP-1 plasmids in Mexican soil. Frontiers in Microbiology. 6: 163. PMID 25784901 DOI: 10.3389/Fmicb.2015.00163 |
0.493 |
|
| 2015 |
Zhang M, Warmink J, Pereira E Silva MC, Brons J, Smalla K, van Elsas JD. IncP-1β Plasmids Are Important Carriers of Fitness Traits for Variovorax Species in the Mycosphere--Two Novel Plasmids, pHB44 and pBS64, with Differential Effects Unveiled. Microbial Ecology. 70: 141-53. PMID 25542203 DOI: 10.1007/S00248-014-0550-Y |
0.402 |
|
| 2015 |
Gillings MR, Gaze WH, Pruden A, Smalla K, Tiedje JM, Zhu YG. Using the class 1 integron-integrase gene as a proxy for anthropogenic pollution. The Isme Journal. 9: 1269-79. PMID 25500508 DOI: 10.1038/Ismej.2014.226 |
0.381 |
|
| 2015 |
Jechalke S, Broszat M, Lang F, Siebe C, Smalla K, Grohmann E. Effects of 100 years wastewater irrigation on resistance genes, class 1 integrons and IncP-1 plasmids in Mexican soil Frontiers in Microbiology. 6. DOI: 10.3389/fmicb.2015.00163 |
0.348 |
|
| 2015 |
Marques JM, da Silva TF, Vollú RE, de Lacerda JRM, Blank AF, Smalla K, Seldin L. Bacterial endophytes of sweet potato tuberous roots affected by the plant genotype and growth stage Applied Soil Ecology. 96: 273-281. DOI: 10.1016/J.Apsoil.2015.08.020 |
0.486 |
|
| 2014 |
Wolters B, Kyselková M, Krögerrecklenfort E, Kreuzig R, Smalla K. Transferable antibiotic resistance plasmids from biogas plant digestates often belong to the IncP-1ε subgroup. Frontiers in Microbiology. 5: 765. PMID 25653641 DOI: 10.3389/Fmicb.2014.00765 |
0.455 |
|
| 2014 |
Berg G, Grube M, Schloter M, Smalla K. The plant microbiome and its importance for plant and human health. Frontiers in Microbiology. 5: 491. PMID 25278934 DOI: 10.3389/Fmicb.2014.00491 |
0.374 |
|
| 2014 |
Schreiter S, Ding GC, Grosch R, Kropf S, Antweiler K, Smalla K. Soil type-dependent effects of a potential biocontrol inoculant on indigenous bacterial communities in the rhizosphere of field-grown lettuce. Fems Microbiology Ecology. 90: 718-30. PMID 25244497 DOI: 10.1111/1574-6941.12430 |
0.552 |
|
| 2014 |
Babin D, Vogel C, Zühlke S, Schloter M, Pronk GJ, Heister K, Spiteller M, Kögel-Knabner I, Smalla K. Soil mineral composition matters: Response of microbial communities to phenanthrene and plant litter addition in long-term matured artificial soils Plos One. 9. PMID 25222697 DOI: 10.1371/Journal.Pone.0106865 |
0.524 |
|
| 2014 |
Berg G, Erlacher A, Smalla K, Krause R. Vegetable microbiomes: is there a connection among opportunistic infections, human health and our 'gut feeling'? Microbial Biotechnology. 7: 487-95. PMID 25186140 DOI: 10.1111/1751-7915.12159 |
0.311 |
|
| 2014 |
Schreiter S, Sandmann M, Smalla K, Grosch R. Soil type dependent rhizosphere competence and biocontrol of two bacterial inoculant strains and their effects on the rhizosphere microbial community of field-grown lettuce Plos One. 9. PMID 25099168 DOI: 10.1371/Journal.Pone.0103726 |
0.555 |
|
| 2014 |
Jechalke S, Heuer H, Siemens J, Amelung W, Smalla K. Fate and effects of veterinary antibiotics in soil Trends in Microbiology. 22: 536-545. PMID 24950802 DOI: 10.1016/J.Tim.2014.05.005 |
0.486 |
|
| 2014 |
Berg G, Grube M, Schloter M, Smalla K. Unraveling the plant microbiome: looking back and future perspectives. Frontiers in Microbiology. 5: 148. PMID 24926286 DOI: 10.3389/Fmicb.2014.00148 |
0.353 |
|
| 2014 |
Schreiter S, Ding GC, Heuer H, Neumann G, Sandmann M, Grosch R, Kropf S, Smalla K. Effect of the soil type on the microbiome in the rhizosphere of field-grown lettuce. Frontiers in Microbiology. 5: 144. PMID 24782839 DOI: 10.3389/Fmicb.2014.00144 |
0.542 |
|
| 2014 |
Dealtry S, Holmsgaard PN, Dunon V, Jechalke S, Ding GC, Krögerrecklenfort E, Heuer H, Hansen LH, Springael D, Zühlke S, Sørensen SJ, Smalla K. Shifts in abundance and diversity of mobile genetic elements after the introduction of diverse pesticides into an on-farm biopurification system over the course of a year. Applied and Environmental Microbiology. 80: 4012-20. PMID 24771027 DOI: 10.1128/Aem.04016-13 |
0.442 |
|
| 2014 |
Oliveira V, Gomes NCM, Almeida A, Silva AMS, Simões MMQ, Smalla K, Cunha A. Hydrocarbon contamination and plant species determine the phylogenetic and functional diversity of endophytic degrading bacteria Molecular Ecology. 23: 1392-1404. PMID 24765659 DOI: 10.1111/Mec.12559 |
0.474 |
|
| 2014 |
Ding GC, Radl V, Schloter-Hai B, Jechalke S, Heuer H, Smalla K, Schloter M. Dynamics of soil bacterial communities in response to repeated application of manure containing sulfadiazine. Plos One. 9: e92958. PMID 24671113 DOI: 10.1371/Journal.Pone.0092958 |
0.538 |
|
| 2014 |
Marques JM, da Silva TF, Vollu RE, Blank AF, Ding GC, Seldin L, Smalla K. Plant age and genotype affect the bacterial community composition in the tuber rhizosphere of field-grown sweet potato plants. Fems Microbiology Ecology. 88: 424-35. PMID 24597529 DOI: 10.1111/1574-6941.12313 |
0.536 |
|
| 2014 |
Dealtry S, Ding GC, Weichelt V, Dunon V, Schlüter A, Martini MC, Del Papa MF, Lagares A, Amos GC, Wellington EM, Gaze WH, Sipkema D, Sjöling S, Springael D, Heuer H, ... ... Smalla K, et al. Cultivation-independent screening revealed hot spots of IncP-1, IncP-7 and IncP-9 plasmid occurrence in different environmental habitats. Plos One. 9: e89922. PMID 24587126 DOI: 10.1371/Journal.Pone.0089922 |
0.427 |
|
| 2014 |
Neumann G, Bott S, Ohler MA, Mock HP, Lippmann R, Grosch R, Smalla K. Root exudation and root development of lettuce (Lactuca sativa L. cv. Tizian) as affected by different soils. Frontiers in Microbiology. 5: 2. PMID 24478764 DOI: 10.3389/Fmicb.2014.00002 |
0.497 |
|
| 2014 |
Jechalke S, Focks A, Rosendahl I, Groeneweg J, Siemens J, Heuer H, Smalla K. Structural and functional response of the soil bacterial community to application of manure from difloxacin-treated pigs Fems Microbiology Ecology. 87: 78-88. PMID 23962048 DOI: 10.1111/1574-6941.12191 |
0.559 |
|
| 2014 |
Schreiter S, Ding GC, Heuer H, Neumann G, Sandmann M, Grosch R, Kropf S, Smalla K. Effect of the soil type on the microbiome in the rhizosphere of field-grown lettuce Frontiers in Microbiology. 5. DOI: 10.3389/fmicb.2014.00144 |
0.312 |
|
| 2014 |
Neumann G, Bott S, Ohler MA, Mock HP, Lippmann R, Grosch R, Smalla K. Root exudation and root development of lettuce (lactuca sativa l. Cv. Tizian) as affected by different soils Frontiers in Microbiology. 5. DOI: 10.3389/fmicb.2014.00002 |
0.307 |
|
| 2014 |
Schreiter S, Sandmann M, Smalla K, Grosch R. DGGE fingerprints (a) of bacterial 16Sr-RNA gene fragments from community DNA extracts were obtained from lettuce rhizosphere 2WAP of lettuce into the AL soil (second experiment). Plos One. DOI: 10.1371/Journal.Pone.0103726.G004 |
0.473 |
|
| 2014 |
Ding GC, Radl V, Schloter-Hai B, Jechalke S, Heuer H, Smalla K, Schloter M. Dynamics of soil bacterial communities in response to repeated application of manure containing sulfadiazine Plos One. 9. DOI: 10.1371/journal.pone.0092958 |
0.376 |
|
| 2014 |
Schreiter S, Ding GC, Grosch R, Kropf S, Antweiler K, Smalla K. Soil type-dependent effects of a potential biocontrol inoculant on indigenous bacterial communities in the rhizosphere of field-grown lettuce Fems Microbiology Ecology. 90: 718-730. DOI: 10.1111/1574-6941.12430 |
0.404 |
|
| 2014 |
Vogel C, Babin D, Pronk GJ, Heister K, Smalla K, Kögel-Knabner I. Establishment of macro-aggregates and organic matter turnover by microbial communities in long-term incubated artificial soils Soil Biology and Biochemistry. 79: 57-67. DOI: 10.1016/J.Soilbio.2014.07.012 |
0.52 |
|
| 2014 |
Gomes NCM, Cleary DFR, Pires ACC, Almeida A, Cunha A, Mendonça-Hagler LCS, Smalla K. Assessing variation in bacterial composition between the rhizospheres of two mangrove tree species Estuarine, Coastal and Shelf Science. 139: 40-45. DOI: 10.1016/J.Ecss.2013.12.022 |
0.748 |
|
| 2013 |
Jechalke S, Schreiter S, Wolters B, Dealtry S, Heuer H, Smalla K. Widespread dissemination of class 1 integron components in soils and related ecosystems as revealed by cultivation-independent analysis. Frontiers in Microbiology. 4: 420. PMID 24478761 DOI: 10.3389/Fmicb.2013.00420 |
0.524 |
|
| 2013 |
Dematheis F, Kurtz B, Vidal S, Smalla K. Multitrophic interactions among Western Corn Rootworm, Glomus intraradices and microbial communities in the rhizosphere and endorhiza of maize. Frontiers in Microbiology. 4: 357. PMID 24376437 DOI: 10.3389/Fmicb.2013.00357 |
0.52 |
|
| 2013 |
Jechalke S, Kopmann C, Richter M, Moenickes S, Heuer H, Smalla K. Plasmid-mediated fitness advantage of Acinetobacter baylyi in sulfadiazine-polluted soil Fems Microbiology Letters. 348: 127-132. PMID 24118075 DOI: 10.1111/1574-6968.12284 |
0.487 |
|
| 2013 |
Hanzel J, Myrold D, Sessitsch A, Smalla K, Tebbe CC, Totsche KU. Microbial ecology of biogeochemical interfaces - diversity, structure, and function of microhabitats in soil Fems Microbiology Ecology. 86: 1-2. PMID 24020336 DOI: 10.1111/1574-6941.12194 |
0.46 |
|
| 2013 |
Yano H, Rogers LM, Knox MG, Heuer H, Smalla K, Brown CJ, Top EM. Host range diversification within the IncP-1 plasmid group. Microbiology (Reading, England). 159: 2303-15. PMID 24002747 DOI: 10.1099/Mic.0.068387-0 |
0.358 |
|
| 2013 |
Dunon V, Sniegowski K, Bers K, Lavigne R, Smalla K, Springael D. High prevalence of IncP-1 plasmids and IS1071 insertion sequences in on-farm biopurification systems and other pesticide-polluted environments Fems Microbiology Ecology. 86: 415-431. PMID 23802695 DOI: 10.1111/1574-6941.12173 |
0.427 |
|
| 2013 |
Mello A, Ding GC, Piceno YM, Napoli C, Tom LM, DeSantis TZ, Andersen GL, Smalla K, Bonfante P. Truffle Brûlés Have an Impact on the Diversity of Soil Bacterial Communities Plos One. 8. PMID 23667413 DOI: 10.1371/Journal.Pone.0061945 |
0.448 |
|
| 2013 |
Ditterich F, Poll C, Pagel H, Babin D, Smalla K, Horn MA, Streck T, Kandeler E. Succession of bacterial and fungal 4-chloro-2-methylphenoxyacetic acid degraders at the soil-litter interface Fems Microbiology Ecology. 86: 85-100. PMID 23560662 DOI: 10.1111/1574-6941.12131 |
0.502 |
|
| 2013 |
Król JE, Wojtowicz AJ, Rogers LM, Heuer H, Smalla K, Krone SM, Top EM. Invasion of E. coli biofilms by antibiotic resistance plasmids. Plasmid. 70: 110-9. PMID 23558148 DOI: 10.1016/J.Plasmid.2013.03.003 |
0.332 |
|
| 2013 |
Ding GC, Piceno YM, Heuer H, Weinert N, Dohrmann AB, Carrillo A, Andersen GL, Castellanos T, Tebbe CC, Smalla K. Changes of Soil Bacterial Diversity as a Consequence of Agricultural Land Use in a Semi-Arid Ecosystem Plos One. 8. PMID 23527207 DOI: 10.1371/Journal.Pone.0059497 |
0.532 |
|
| 2013 |
Köberl M, Ramadan EM, Adam M, Cardinale M, Hallmann J, Heuer H, Smalla K, Berg G. Bacillus and streptomyces were selected as broad-spectrum antagonists against soilborne pathogens from arid areas in egypt Fems Microbiology Letters. 342: 168-178. PMID 23350560 DOI: 10.1111/1574-6968.12089 |
0.571 |
|
| 2013 |
Babin D, Ding GC, Pronk GJ, Heister K, Kögel-Knabner I, Smalla K. Metal oxides, clay minerals and charcoal determine the composition of microbial communities in matured artificial soils and their response to phenanthrene Fems Microbiology Ecology. 86: 3-14. PMID 23336569 DOI: 10.1111/1574-6941.12058 |
0.519 |
|
| 2013 |
Jechalke S, Kopmann C, Rosendahl I, Groeneweg J, Weichelt V, Krögerrecklenfort E, Brandes N, Nordwig M, Ding GC, Siemens J, Heuer H, Smalla K. Increased abundance and transferability of resistance genes after field application of manure from sulfadiazine-treated pigs Applied and Environmental Microbiology. 79: 1704-1711. PMID 23315733 DOI: 10.1128/Aem.03172-12 |
0.531 |
|
| 2013 |
Ding GC, Pronk GJ, Babin D, Heuer H, Heister K, Kögel-Knabner I, Smalla K. Mineral composition and charcoal determine the bacterial community structure in artificial soils Fems Microbiology Ecology. 86: 15-25. PMID 23289489 DOI: 10.1111/1574-6941.12070 |
0.527 |
|
| 2013 |
Jechalke S, Dealtry S, Smalla K, Heuer H. Quantification of IncP-1 plasmid prevalence in environmental: Samples Applied and Environmental Microbiology. 79: 1410-1413. PMID 23241977 DOI: 10.1128/Aem.03728-12 |
0.363 |
|
| 2013 |
Kopmann C, Jechalke S, Rosendahl I, Groeneweg J, Krögerrecklenfort E, Zimmerling U, Weichelt V, Siemens J, Amelung W, Heuer H, Smalla K. Abundance and transferability of antibiotic resistance as related to the fate of sulfadiazine in maize rhizosphere and bulk soil Fems Microbiology Ecology. 83: 125-134. PMID 22809094 DOI: 10.1111/J.1574-6941.2012.01458.X |
0.506 |
|
| 2013 |
Xue QY, Ding GC, Li SM, Yang Y, Lan CZ, Guo JH, Smalla K. Rhizocompetence and antagonistic activity towards genetically diverse Ralstonia solanacearum strains - An improved strategy for selecting biocontrol agents Applied Microbiology and Biotechnology. 97: 1361-1371. PMID 22526784 DOI: 10.1007/S00253-012-4021-4 |
0.446 |
|
| 2013 |
Smalla K, Heuer H. Mikrobielle Vielfalt in der Rhizosphäre und im Boden Julius-KüHn-Archiv. 115-115. DOI: 10.5073/Jka.2012.436.018 |
0.543 |
|
| 2013 |
Jechalke S, Schreiter S, Wolters B, Dealtry S, Heuer H, Smalla K. Widespread dissemination of class 1 integron components in soils and related ecosystems as revealed by cultivation-independent analysis Frontiers in Microbiology. 4. DOI: 10.3389/fmicb.2013.00420 |
0.311 |
|
| 2013 |
Yim B, Smalla K, Winkelmann T. Evaluation of apple replant problems based on different soil disinfection treatments-links to soil microbial community structure? Plant and Soil. 366: 617-631. DOI: 10.1007/S11104-012-1454-6 |
0.492 |
|
| 2012 |
Dematheis F, Kurtz B, Vidal S, Smalla K. Microbial Communities Associated with the Larval Gut and Eggs of the Western Corn Rootworm Plos One. 7. PMID 23056182 DOI: 10.1371/Journal.Pone.0044685 |
0.376 |
|
| 2012 |
Eltlbany N, Prokscha ZZ, Castañeda-Ojeda MP, Krögerrecklenfort E, Heuer H, Wohank W, Ramos C, Smalla K. A new bacterial disease on Mandevilla sanderi, caused by Pseudomonas savastanoi: Lessons learned for bacterial diversity studies Applied and Environmental Microbiology. 78: 8492-8497. PMID 23023746 DOI: 10.1128/Aem.02049-12 |
0.417 |
|
| 2012 |
Ding GC, Heuer H, Smalla K. Dynamics of bacterial communities in two unpolluted soils after spiking with phenanthrene: soil type specific and common responders. Frontiers in Microbiology. 3: 290. PMID 22934091 DOI: 10.3389/Fmicb.2012.00290 |
0.523 |
|
| 2012 |
Pires AC, Cleary DF, Almeida A, Cunha A, Dealtry S, Mendonça-Hagler LC, Smalla K, Gomes NC. Denaturing gradient gel electrophoresis and barcoded pyrosequencing reveal unprecedented archaeal diversity in mangrove sediment and rhizosphere samples. Applied and Environmental Microbiology. 78: 5520-8. PMID 22660713 DOI: 10.1128/Aem.00386-12 |
0.414 |
|
| 2012 |
Dematheis F, Zimmerling U, Flocco C, Kurtz B, Vidal S, Kropf S, Smalla K. Multitrophic interaction in the rhizosphere of maize: Root feeding of western corn rootworm larvae alters the microbial community composition Plos One. 7. PMID 22629377 DOI: 10.1371/Journal.Pone.0037288 |
0.414 |
|
| 2012 |
Ding GC, Heuer H, He Z, Xie J, Zhou J, Smalla K. More functional genes and convergent overall functional patterns detected by geochip in phenanthrene-spiked soils Fems Microbiology Ecology. 82: 148-156. PMID 22587620 DOI: 10.1111/J.1574-6941.2012.01413.X |
0.505 |
|
| 2012 |
Rossmann B, Müller H, Smalla K, Mpiira S, Tumuhairwe JB, Staver C, Berg G. Banana-associated microbial communities in Uganda are highly diverse but dominated by Enterobacteriaceae Applied and Environmental Microbiology. 78: 4933-4941. PMID 22562988 DOI: 10.1128/Aem.00772-12 |
0.554 |
|
| 2012 |
Moura A, Oliveira C, Henriques I, Smalla K, Correia A. Broad diversity of conjugative plasmids in integron-carrying bacteria from wastewater environments Fems Microbiology Letters. 330: 157-164. PMID 22409355 DOI: 10.1111/J.1574-6968.2012.02544.X |
0.385 |
|
| 2012 |
Heuer H, Smalla K. Plasmids foster diversification and adaptation of bacterial populations in soil Fems Microbiology Reviews. 36: 1083-1104. PMID 22393901 DOI: 10.1111/J.1574-6976.2012.00337.X |
0.512 |
|
| 2012 |
Heuer H, Binh CT, Jechalke S, Kopmann C, Zimmerling U, Krögerrecklenfort E, Ledger T, González B, Top E, Smalla K. IncP-1ε Plasmids are Important Vectors of Antibiotic Resistance Genes in Agricultural Systems: Diversification Driven by Class 1 Integron Gene Cassettes. Frontiers in Microbiology. 3: 2. PMID 22279444 DOI: 10.3389/Fmicb.2012.00002 |
0.532 |
|
| 2012 |
Cleary DF, Smalla K, Mendonça-Hagler LC, Gomes NC. Assessment of variation in bacterial composition among microhabitats in a mangrove environment using DGGE fingerprints and barcoded pyrosequencing. Plos One. 7: e29380. PMID 22247774 DOI: 10.1371/Journal.Pone.0029380 |
0.358 |
|
| 2012 |
Thiele K, Smalla K, Kropf S, Rabenstein F. Detection of Acidovorax valerianellae, the causing agent of bacterial leaf spots in corn salad [Valerianella locusta (L.) Laterr.], in corn salad seeds Letters in Applied Microbiology. 54: 112-118. PMID 22098338 DOI: 10.1111/J.1472-765X.2011.03181.X |
0.37 |
|
| 2012 |
Krasowiak R, Smalla K, Sokolov S, Kosheleva I, Sevastyanovich Y, Titok M, Thomas CM. PCR primers for detection and characterisation of IncP-9 plasmids. Fems Microbiology Ecology. 42: 217-25. PMID 19709281 DOI: 10.1111/j.1574-6941.2002.tb01011.x |
0.369 |
|
| 2012 |
Ding GC, Heuer H, Smalla K. Dynamics of bacterial communities in two unpolluted soils after spiking with phenanthrene: Soil type specific and common responders Frontiers in Microbiology. 3. DOI: 10.3389/fmicb.2012.00290 |
0.388 |
|
| 2012 |
Pronk GJ, Heister K, Ding GC, Smalla K, Kögel-Knabner I. Development of biogeochemical interfaces in an artificial soil incubation experiment; aggregation and formation of organo-mineral associations Geoderma. 189: 585-594. DOI: 10.1016/J.Geoderma.2012.05.020 |
0.421 |
|
| 2012 |
Grosch R, Dealtry S, Schreiter S, Berg G, Mendonça-Hagler L, Smalla K. Biocontrol of Rhizoctonia solani: Complex interaction of biocontrol strains, pathogen and indigenous microbial community in the rhizosphere of lettuce shown by molecular methods Plant and Soil. 361: 343-357. DOI: 10.1007/S11104-012-1239-Y |
0.72 |
|
| 2011 |
Baldrian P, Head IM, Prosser JI, Schloter M, Smalla K, Tebbe CC. Ecology and metagenomics of soil microorganisms Fems Microbiology Ecology. 78: 1-2. PMID 22092139 DOI: 10.1111/J.1574-6941.2011.01184.X |
0.486 |
|
| 2011 |
Heuer H, Schmitt H, Smalla K. Antibiotic resistance gene spread due to manure application on agricultural fields Current Opinion in Microbiology. 14: 236-243. PMID 21546307 DOI: 10.1016/J.Mib.2011.04.009 |
0.458 |
|
| 2011 |
Heuer H, Solehati Q, Zimmerling U, Kleineidam K, Schloter M, Müller T, Focks A, Thiele-Bruhn S, Smalla K. Accumulation of sulfonamide resistance genes in arable soils due to repeated application of manure containing sulfadiazine Applied and Environmental Microbiology. 77: 2527-2530. PMID 21296942 DOI: 10.1128/Aem.02577-10 |
0.481 |
|
| 2011 |
Petric I, Philippot L, Abbate C, Bispo A, Chesnot T, Hallin S, Laval K, Lebeau T, Lemanceau P, Leyval C, Lindström K, Pandard P, Romero E, Sarr A, Schloter M, ... ... Smalla K, et al. Inter-laboratory evaluation of the ISO standard 11063 "Soil quality - Method to directly extract DNA from soil samples" Journal of Microbiological Methods. 84: 454-460. PMID 21256879 DOI: 10.1016/J.Mimet.2011.01.016 |
0.498 |
|
| 2011 |
Xue QY, Yin YN, Yang W, Heuer H, Prior P, Guo JH, Smalla K. Genetic diversity of Ralstonia solanacearum strains from China assessed by PCR-based fingerprints to unravel host plant- and site-dependent distribution patterns Fems Microbiology Ecology. 75: 507-519. PMID 21204873 DOI: 10.1111/J.1574-6941.2010.01026.X |
0.392 |
|
| 2011 |
Weinert N, Piceno Y, Ding GC, Meincke R, Heuer H, Berg G, Schloter M, Andersen G, Smalla K. PhyloChip hybridization uncovered an enormous bacterial diversity in the rhizosphere of different potato cultivars: Many common and few cultivar-dependent taxa Fems Microbiology Ecology. 75: 497-506. PMID 21204872 DOI: 10.1111/J.1574-6941.2010.01025.X |
0.446 |
|
| 2011 |
Heuer H, Kopmann C, Zimmerling U, Krögerrecklenfort E, Kleineidamm K, Schloter M, Top EM, Smalla K. Effect of Veterinary Medicines Introduced via Manure into Soil on the Abundance and Diversity of Antibiotic Resistance Genes on Their Transferability Antimicrobial Resistance in the Environment. 453-463. DOI: 10.1002/9781118156247.ch23 |
0.37 |
|
| 2010 |
Gomes NC, Cleary DF, Pinto FN, Egas C, Almeida A, Cunha A, Mendonça-Hagler LC, Smalla K. Taking root: enduring effect of rhizosphere bacterial colonization in mangroves. Plos One. 5: e14065. PMID 21124923 DOI: 10.1371/Journal.Pone.0014065 |
0.45 |
|
| 2010 |
Yousaf S, Andria V, Reichenauer TG, Smalla K, Sessitsch A. Phylogenetic and functional diversity of alkane degrading bacteria associated with Italian ryegrass (Lolium multiflorum) and Birdsfoot trefoil (Lotus corniculatus) in a petroleum oil-contaminated environment Journal of Hazardous Materials. 184: 523-532. PMID 20851515 DOI: 10.1016/J.Jhazmat.2010.08.067 |
0.481 |
|
| 2010 |
Gomes NC, Flocco CG, Costa R, Junca H, Vilchez R, Pieper DH, Krögerrecklenfort E, Paranhos R, Mendonça-Hagler LC, Smalla K. Mangrove microniches determine the structural and functional diversity of enriched petroleum hydrocarbon-degrading consortia. Fems Microbiology Ecology. 74: 276-90. PMID 20812953 DOI: 10.1111/J.1574-6941.2010.00962.X |
0.572 |
|
| 2010 |
Weinert N, Meincke R, Gottwald C, Heuer H, Schloter M, Berg G, Smalla K. Bacterial diversity on the surface of potato tubers in soil and the influence of the plant genotype Fems Microbiology Ecology. 74: 114-123. PMID 20698886 DOI: 10.1111/J.1574-6941.2010.00936.X |
0.497 |
|
| 2010 |
Gomes NCM, Landi L, Smalla K, Nannipieri P, Brookes PC, Renella G. Effects of Cd- and Zn-enriched sewage sludge on soil bacterial and fungal communities Ecotoxicology and Environmental Safety. 73: 1255-1263. PMID 20688396 DOI: 10.1016/J.Ecoenv.2010.07.027 |
0.451 |
|
| 2010 |
Kleineidam K, Sharma S, Kotzerke A, Heuer H, Thiele-Bruhn S, Smalla K, Wilke BM, Schloter M. Effect of Sulfadiazine on Abundance and Diversity of Denitrifying Bacteria by Determining nirK and nirS Genes in Two Arable Soils Microbial Ecology. 60: 703-707. PMID 20532498 DOI: 10.1007/S00248-010-9691-9 |
0.52 |
|
| 2010 |
Ding GC, Heuer H, Zühlke S, Spiteller M, Pronk GJ, Heister K, Kögel-Knabner I, Smalla K. Soil type-dependent responses to phenanthrene as revealed by determining the diversity and abundance of polycyclic aromatic hydrocarbon ring-hydroxylating dioxygenase genes by using a novel PCR detection system Applied and Environmental Microbiology. 76: 4765-4771. PMID 20495045 DOI: 10.1128/Aem.00047-10 |
0.477 |
|
| 2010 |
Heuer H, Ebers J, Weinert N, Smalla K. Variation in permissiveness for broad-host-range plasmids among genetically indistinguishable isolates of Dickeya sp. from a small field plot Fems Microbiology Ecology. 73: 190-196. PMID 20455941 DOI: 10.1111/J.1574-6941.2010.00880.X |
0.383 |
|
| 2010 |
Moura A, Henriques I, Smalla K, Correia A. Wastewater bacterial communities bring together broad-host range plasmids, integrons and a wide diversity of uncharacterized gene cassettes. Research in Microbiology. 161: 58-66. PMID 20004718 DOI: 10.1016/J.Resmic.2009.11.004 |
0.437 |
|
| 2010 |
Hjort K, Bergström M, Adesina MF, Jansson JK, Smalla K, Sjöling S. Chitinase genes revealed and compared in bacterial isolates, DNA extracts and a metagenomic library from a phytopathogen-suppressive soil Fems Microbiology Ecology. 71: 197-207. PMID 19922433 DOI: 10.1111/J.1574-6941.2009.00801.X |
0.483 |
|
| 2010 |
Meincke R, Weinert N, Radl V, Schloter M, Smalla K, Berg G. Development of a molecular approach to describe the composition of Trichoderma communities. Journal of Microbiological Methods. 80: 63-9. PMID 19896986 DOI: 10.1016/J.Mimet.2009.11.001 |
0.416 |
|
| 2010 |
Philippot L, Abbate C, Bispo A, Chesnot T, Hallin S, Lemanceau P, Lindström K, Pandard P, Romero E, Schloter M, Simonet P, Smalla K, Wilke BM, Petric I, Martin-Laurent F. Soil microbial diversity: an ISO standard for soil DNA extraction Journal of Soils and Sediments. 1-2. DOI: 10.1007/S11368-010-0265-8 |
0.463 |
|
| 2010 |
Weinert N, Meincke R, Gottwald C, Radl V, Dong X, Schloter M, Berg G, Smalla K. Effects of genetically modified potatoes with increased zeaxanthin content on the abundance and diversity of rhizobacteria with in vitro antagonistic activity do not exceed natural variability among cultivars Plant and Soil. 326: 437-452. DOI: 10.1007/S11104-009-0024-Z |
0.421 |
|
| 2010 |
Totsche KU, Rennert T, Gerzabek MH, Kögel-Knabner I, Smalla K, Spiteller M, Vogel HJ. Biogeochemical interfaces in soil: The interdisciplinary challenge for soil science Journal of Plant Nutrition and Soil Science. 173: 88-99. DOI: 10.1002/Jpln.200900105 |
0.428 |
|
| 2010 |
Weinert N, Meincke R, Schloter M, Berg G, Smalla K. Effects of Genetically Modified Plants on Soil Microorganisms Environmental Microbiology: Second Edition. 235-258. DOI: 10.1002/9780470495117.ch10 |
0.366 |
|
| 2009 |
Binh CT, Heuer H, Kaupenjohann M, Smalla K. Diverse aadA gene cassettes on class 1 integrons introduced into soil via spread manure. Research in Microbiology. 160: 427-33. PMID 19580864 DOI: 10.1016/J.Resmic.2009.06.005 |
0.508 |
|
| 2009 |
Adesina MF, Grosch R, Lembke A, Vatchev TD, Smalla K. In vitro antagonists of Rhizoctonia solani tested on lettuce: rhizosphere competence, biocontrol efficiency and rhizosphere microbial community response. Fems Microbiology Ecology. 69: 62-74. PMID 19486156 DOI: 10.1111/J.1574-6941.2009.00685.X |
0.502 |
|
| 2009 |
Weinert N, Meincke R, Gottwald C, Heuer H, Gomes NC, Schloter M, Berg G, Smalla K. Rhizosphere communities of genetically modified zeaxanthin-accumulating potato plants and their parent cultivar differ less than those of different potato cultivars. Applied and Environmental Microbiology. 75: 3859-65. PMID 19376893 DOI: 10.1128/Aem.00414-09 |
0.437 |
|
| 2009 |
Flocco CG, Gomes NC, Mac Cormack W, Smalla K. Occurrence and diversity of naphthalene dioxygenase genes in soil microbial communities from the Maritime Antarctic. Environmental Microbiology. 11: 700-14. PMID 19278452 DOI: 10.1111/J.1462-2920.2008.01858.X |
0.568 |
|
| 2009 |
Berg G, Smalla K. Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere. Fems Microbiology Ecology. 68: 1-13. PMID 19243436 DOI: 10.1111/J.1574-6941.2009.00654.X |
0.515 |
|
| 2009 |
Schauss K, Focks A, Leininger S, Kotzerke A, Heuer H, Thiele-Bruhn S, Sharma S, Wilke BM, Matthies M, Smalla K, Munch JC, Amelung W, Kaupenjohann M, Schloter M, Schleper C. Dynamics and functional relevance of ammonia-oxidizing archaea in two agricultural soils Environmental Microbiology. 11: 446-456. PMID 19196275 DOI: 10.1111/J.1462-2920.2008.01783.X |
0.44 |
|
| 2009 |
Heuer H, Kopmann C, Binh CT, Top EM, Smalla K. Spreading antibiotic resistance through spread manure: characteristics of a novel plasmid type with low %G+C content. Environmental Microbiology. 11: 937-49. PMID 19055690 DOI: 10.1111/J.1462-2920.2008.01819.X |
0.5 |
|
| 2009 |
Schauss K, Focks A, Heuer H, Kotzerke A, Schmitt H, Thiele-Bruhn S, Smalla K, Wilke BM, Matthies M, Amelung W, Klasmeier J, Schloter M. Analysis, fate and effects of the antibiotic sulfadiazine in soil ecosystems Trac - Trends in Analytical Chemistry. 28: 612-618. DOI: 10.1016/J.Trac.2009.02.009 |
0.496 |
|
| 2008 |
Sevastsyanovich YR, Krasowiak R, Bingle LE, Haines AS, Sokolov SL, Kosheleva IA, Leuchuk AA, Titok MA, Smalla K, Thomas CM. Diversity of IncP-9 plasmids of Pseudomonas. Microbiology (Reading, England). 154: 2929-41. PMID 18832300 DOI: 10.1099/Mic.0.2008/017939-0 |
0.389 |
|
| 2008 |
Smalla K, Tebbe CC, van Elsas JD, Vogel TM. Microbial community networks. Fems Microbiology Ecology. 66: 1-2. PMID 18826545 DOI: 10.1111/J.1574-6941.2008.00596.X |
0.336 |
|
| 2008 |
Heuer H, Abdo Z, Smalla K. Patchy distribution of flexible genetic elements in bacterial populations mediates robustness to environmental uncertainty. Fems Microbiology Ecology. 65: 361-71. PMID 18616581 DOI: 10.1111/J.1574-6941.2008.00539.X |
0.31 |
|
| 2008 |
Binh CT, Heuer H, Kaupenjohann M, Smalla K. Piggery manure used for soil fertilization is a reservoir for transferable antibiotic resistance plasmids. Fems Microbiology Ecology. 66: 25-37. PMID 18557938 DOI: 10.1111/J.1574-6941.2008.00526.X |
0.442 |
|
| 2008 |
Marcial Gomes NC, Borges LR, Paranhos R, Pinto FN, Mendonça-Hagler LC, Smalla K. Exploring the diversity of bacterial communities in sediments of urban mangrove forests. Fems Microbiology Ecology. 66: 96-109. PMID 18537833 DOI: 10.1111/J.1574-6941.2008.00519.X |
0.411 |
|
| 2008 |
Kotzerke A, Sharma S, Schauss K, Heuer H, Thiele-Bruhn S, Smalla K, Wilke BM, Schloter M. Alterations in soil microbial activity and N-transformation processes due to sulfadiazine loads in pig-manure. Environmental Pollution (Barking, Essex : 1987). 153: 315-22. PMID 17905496 DOI: 10.1016/J.Envpol.2007.08.020 |
0.474 |
|
| 2008 |
Heuer H, Focks A, Lamshöft M, Smalla K, Matthies M, Spiteller M. Fate of sulfadiazine administered to pigs and its quantitative effect on the dynamics of bacterial resistance genes in manure and manured soil Soil Biology and Biochemistry. 40: 1892-1900. DOI: 10.1016/J.Soilbio.2008.03.014 |
0.514 |
|
| 2008 |
Hammesfahr U, Heuer H, Manzke B, Smalla K, Thiele-Bruhn S. Impact of the antibiotic sulfadiazine and pig manure on the microbial community structure in agricultural soils Soil Biology and Biochemistry. 40: 1583-1591. DOI: 10.1016/J.Soilbio.2008.01.010 |
0.503 |
|
| 2008 |
Rodríguez-Sánchez C, Altendorf K, Smalla K, Lipski A. Spraying of oxytetracycline and gentamicin onto field-grown coriander did not affect the abundance of resistant bacteria, resistance genes, and broad host range plasmids detected in tropical soil bacteria Biology and Fertility of Soils. 44: 589-596. DOI: 10.1007/S00374-007-0242-6 |
0.458 |
|
| 2007 |
Binh CT, Heuer H, Gomes NC, Kotzerke A, Fulle M, Wilke BM, Schloter M, Smalla K. Short-term effects of amoxicillin on bacterial communities in manured soil. Fems Microbiology Ecology. 62: 290-302. PMID 17991020 DOI: 10.1111/J.1574-6941.2007.00393.X |
0.535 |
|
| 2007 |
Richter B, Smalla K. Screening of rhizosphere and soil bacteria for transformability. Environmental Biosafety Research. 6: 91-9. PMID 17961483 DOI: 10.1051/Ebr:2007035 |
0.444 |
|
| 2007 |
Heuer H, Smalla K. Horizontal gene transfer between bacteria. Environmental Biosafety Research. 6: 3-13. PMID 17961477 DOI: 10.1051/Ebr:2007034 |
0.408 |
|
| 2007 |
Gomes NC, Borges LR, Paranhos R, Pinto FN, Krögerrecklenfort E, Mendonça-Hagler LC, Smalla K. Diversity of ndo genes in mangrove sediments exposed to different sources of polycyclic aromatic hydrocarbon pollution. Applied and Environmental Microbiology. 73: 7392-9. PMID 17905873 DOI: 10.1128/Aem.01099-07 |
0.398 |
|
| 2007 |
Costa R, Gomes NC, Krögerrecklenfort E, Opelt K, Berg G, Smalla K. Pseudomonas community structure and antagonistic potential in the rhizosphere: insights gained by combining phylogenetic and functional gene-based analyses. Environmental Microbiology. 9: 2260-73. PMID 17686023 DOI: 10.1111/J.1462-2920.2007.01340.X |
0.68 |
|
| 2007 |
Heuer H, Yin YN, Xue QY, Smalla K, Guo JH. Repeat domain diversity of avrBs3-like genes in Ralstonia solanacearum strains and association with host preferences in the field. Applied and Environmental Microbiology. 73: 4379-84. PMID 17468277 DOI: 10.1128/Aem.00367-07 |
0.365 |
|
| 2007 |
Smalla K, Oros-Sichler M, Milling A, Heuer H, Baumgarte S, Becker R, Neuber G, Kropf S, Ulrich A, Tebbe CC. Bacterial diversity of soils assessed by DGGE, T-RFLP and SSCP fingerprints of PCR-amplified 16S rRNA gene fragments: do the different methods provide similar results? Journal of Microbiological Methods. 69: 470-9. PMID 17407797 DOI: 10.1016/J.Mimet.2007.02.014 |
0.5 |
|
| 2007 |
Heuer H, Smalla K. Manure and sulfadiazine synergistically increased bacterial antibiotic resistance in soil over at least two months. Environmental Microbiology. 9: 657-66. PMID 17298366 DOI: 10.1111/J.1462-2920.2006.01185.X |
0.526 |
|
| 2007 |
Hjort K, Lembke A, Speksnijder A, Smalla K, Jansson JK. Community structure of actively growing bacterial populations in plant pathogen suppressive soil. Microbial Ecology. 53: 399-413. PMID 16944345 DOI: 10.1007/S00248-006-9120-2 |
0.566 |
|
| 2007 |
Smalla K, Vogel TM. Presentation of the thematic issue on horizontal gene transfer Environmental Biosafety Research. 6: 1-2. DOI: 10.1051/Ebr:2007038 |
0.341 |
|
| 2007 |
Adesina MF, Lembke A, Costa R, Speksnijder A, Smalla K. Screening of bacterial isolates from various European soils for in vitro antagonistic activity towards Rhizoctonia solani and Fusarium oxysporum: Site-dependent composition and diversity revealed Soil Biology and Biochemistry. 39: 2818-2828. DOI: 10.1016/J.Soilbio.2007.06.004 |
0.64 |
|
| 2007 |
Grosch R, Lottmann J, Rehn VNC, Rehn KG, Mendonca-Hagler L, Smalla K, Berg G. Analysis of antagonistic interactions between Trichoderma isolates from Brazilian weeds and the soil-borne pathogen Rhizoctonia solani Journal of Plant Diseases and Protection. 114: 167-175. DOI: 10.1007/Bf03356213 |
0.756 |
|
| 2006 |
Götz M, Nirenberg H, Krause S, Wolters H, Draeger S, Buchner A, Lottmann J, Berg G, Smalla K. Fungal endophytes in potato roots studied by traditional isolation and cultivation-independent DNA-based methods. Fems Microbiology Ecology. 58: 404-13. PMID 17117985 DOI: 10.1111/J.1574-6941.2006.00169.X |
0.442 |
|
| 2006 |
Costa R, Salles JF, Berg G, Smalla K. Cultivation-independent analysis of Pseudomonas species in soil and in the rhizosphere of field-grown Verticillium dahliae host plants. Environmental Microbiology. 8: 2136-49. PMID 17107555 DOI: 10.1111/J.1462-2920.2006.01096.X |
0.694 |
|
| 2006 |
Smalla K, Haines AS, Jones K, Krögerrecklenfort E, Heuer H, Schloter M, Thomas CM. Increased abundance of IncP-1beta plasmids and mercury resistance genes in mercury-polluted river sediments: first discovery of IncP-1beta plasmids with a complex mer transposon as the sole accessory element. Applied and Environmental Microbiology. 72: 7253-9. PMID 16980416 DOI: 10.1128/Aem.00922-06 |
0.383 |
|
| 2006 |
Berg G, Opelt K, Zachow C, Lottmann J, Götz M, Costa R, Smalla K. The rhizosphere effect on bacteria antagonistic towards the pathogenic fungus Verticillium differs depending on plant species and site. Fems Microbiology Ecology. 56: 250-61. PMID 16629754 DOI: 10.1111/J.1574-6941.2005.00025.X |
0.641 |
|
| 2006 |
Costa R, Götz M, Mrotzek N, Lottmann J, Berg G, Smalla K. Effects of site and plant species on rhizosphere community structure as revealed by molecular analysis of microbial guilds. Fems Microbiology Ecology. 56: 236-49. PMID 16629753 DOI: 10.1111/J.1574-6941.2005.00026.X |
0.689 |
|
| 2006 |
Götz M, Gomes NC, Dratwinski A, Costa R, Berg G, Peixoto R, Mendonça-Hagler L, Smalla K. Survival of gfp-tagged antagonistic bacteria in the rhizosphere of tomato plants and their effects on the indigenous bacterial community. Fems Microbiology Ecology. 56: 207-18. PMID 16629751 DOI: 10.1111/J.1574-6941.2006.00093.X |
0.626 |
|
| 2006 |
Smalla K, Sessitsch A, Hartmann A. The rhizosphere: 'soil compartment influenced by the root'. Fems Microbiology Ecology. 56: 165. PMID 16629746 DOI: 10.1111/J.1574-6941.2006.00148.X |
0.462 |
|
| 2006 |
Izmalkova TY, Mavrodi DV, Sokolov SL, Kosheleva IA, Smalla K, Thomas CM, Boronin AM. Molecular classification of IncP-9 naphthalene degradation plasmids. Plasmid. 56: 1-10. PMID 16472859 DOI: 10.1016/J.Plasmid.2005.12.004 |
0.354 |
|
| 2006 |
Oros-Sichler M, Gomes NCM, Neuber G, Smalla K. A new semi-nested PCR protocol to amplify large 18S rRNA gene fragments for PCR-DGGE analysis of soil fungal communities Journal of Microbiological Methods. 65: 63-75. PMID 16102860 DOI: 10.1016/J.Mimet.2005.06.014 |
0.548 |
|
| 2006 |
Costa R, Gomes NCM, Peixoto RS, Rumjanek N, Berg G, Mendonça-Hagler LCS, Smalla K. Diversity and antagonistic potential of Pseudomonas spp. associated to the rhizosphere of maize grown in a subtropical organic farm Soil Biology and Biochemistry. 38: 2434-2447. DOI: 10.1016/J.Soilbio.2006.03.003 |
0.796 |
|
| 2005 |
Gomes NC, Kosheleva IA, Abraham WR, Smalla K. Effects of the inoculant strain Pseudomonas putida KT2442 (pNF142) and of naphthalene contamination on the soil bacterial community. Fems Microbiology Ecology. 54: 21-33. PMID 16329969 DOI: 10.1016/J.Femsec.2005.02.005 |
0.554 |
|
| 2005 |
Nikolakopoulou TL, Egan S, van Overbeek LS, Guillaume G, Heuer H, Wellington EM, van Elsas JD, Collard JM, Smalla K, Karagouni AD. PCR detection of oxytetracycline resistance genes otr(A) and otr(B) in tetracycline-resistant streptomycete isolates from diverse habitats. Current Microbiology. 51: 211-6. PMID 16132462 DOI: 10.1007/S00284-004-4430-4 |
0.425 |
|
| 2005 |
Berg G, Zachow C, Lottmann J, Götz M, Costa R, Smalla K. Impact of plant species and site on rhizosphere-associated fungi antagonistic to Verticillium dahliae kleb. Applied and Environmental Microbiology. 71: 4203-13. PMID 16085804 DOI: 10.1128/Aem.71.8.4203-4213.2005 |
0.642 |
|
| 2005 |
Milling A, Kehr R, Wulf A, Smalla K. Survival of bacteria on wood and plastic particles: Dependence on wood species and environmental conditions Holzforschung. 59: 72-81. DOI: 10.1515/Hf.2005.012 |
0.402 |
|
| 2005 |
Meier J, Costa R, Smalla K, Boehrer B, Wendt-Potthoff K. Temperature dependence of Fe(III) and sulfate reduction rates and its effect on growth and composition of bacterial enrichments from an acidic pit lake neutralization experiment Geobiology. 3: 261-274. DOI: 10.1111/J.1472-4669.2006.00065.X |
0.506 |
|
| 2005 |
Milling A, Smalla K, Maidl FX, Schloter M, Munch JC. Effects of transgenic potatoes with an altered starch composition on the diversity of soil and rhizosphere bacteria and fungi Plant and Soil. 266: 23-39. DOI: 10.1007/S11104-005-4906-4 |
0.495 |
|
| 2005 |
Russo A, Felici C, Toffanin A, Götz M, Collados C, Barea JM, Moënne-Loccoz Y, Smalla K, Vanderleyden J, Nuti M. Effect of Azospirillum inoculants on arbuscular mycorrhiza establishment in wheat and maize plants Biology and Fertility of Soils. 41: 301-309. DOI: 10.1007/S00374-005-0854-7 |
0.399 |
|
| 2004 |
Kropf S, Heuer H, Grüning M, Smalla K. Significance test for comparing complex microbial community fingerprints using pairwise similarity measures Journal of Microbiological Methods. 57: 187-195. PMID 15063059 DOI: 10.1016/J.Mimet.2004.01.002 |
0.451 |
|
| 2004 |
Costa R, Gomes NC, Milling A, Smalla K. An optmized protocol for simultaneous extraction of DNA and RNA from soils Brazilian Journal of Microbiology. 35: 230-234. DOI: 10.1590/S1517-83822004000200011 |
0.598 |
|
| 2004 |
Lynch JM, Benedetti A, Insam H, Nuti MP, Smalla K, Torsvik V, Nannipieri P. Microbial diversity in soil: Ecological theories, the contribution of molecular techniques and the impact of transgenic plants and transgenic microorganisms Biology and Fertility of Soils. 40: 363-385. DOI: 10.1007/S00374-004-0784-9 |
0.562 |
|
| 2003 |
Schönfeld J, Heuer H, Van Elsas JD, Smalla K. Specific and Sensitive Detection of Ralstonia solanacearum in Soil on the Basis of PCR Amplification of fliC Fragments Applied and Environmental Microbiology. 69: 7248-7256. PMID 14660373 DOI: 10.1128/Aem.69.12.7248-7256.2003 |
0.394 |
|
| 2003 |
Gomes NC, Fagbola O, Costa R, Rumjanek NG, Buchner A, Mendona-Hagler L, Smalla K. Dynamics of fungal communities in bulk and maize rhizosphere soil in the tropics. Applied and Environmental Microbiology. 69: 3758-66. PMID 12839741 DOI: 10.1128/Aem.69.7.3758-3766.2003 |
0.677 |
|
| 2003 |
Schönfeld J, Gelsomino A, Van Overbeek LS, Gorissen A, Smalla K, Van Elsas JD. Effects of compost addition and simulated solarisation on the fate of Ralstonia solanacearum biovar 2 and indigenous bacteria in soil Fems Microbiology Ecology. 43: 63-74. DOI: 10.1111/J.1574-6941.2003.Tb01046.X |
0.536 |
|
| 2002 |
Heuer H, Krögerrecklenfort E, Wellington EM, Egan S, van Elsas JD, van Overbeek L, Collard JM, Guillaume G, Karagouni AD, Nikolakopoulou TL, Smalla K. Gentamicin resistance genes in environmental bacteria: prevalence and transfer. Fems Microbiology Ecology. 42: 289-302. PMID 19709289 DOI: 10.1111/J.1574-6941.2002.Tb01019.X |
0.416 |
|
| 2002 |
van Overbeek LS, Wellington EM, Egan S, Smalla K, Heuer H, Collard JM, Guillaume G, Karagouni AD, Nikolakopoulou TL, van Elsas JD. Prevalence of streptomycin-resistance genes in bacterial populations in European habitats. Fems Microbiology Ecology. 42: 277-88. PMID 19709288 DOI: 10.1111/J.1574-6941.2002.Tb01018.X |
0.427 |
|
| 2002 |
Smalla K, Sobecky PA. The prevalence and diversity of mobile genetic elements in bacterial communities of different environmental habitats: insights gained from different methodological approaches. Fems Microbiology Ecology. 42: 165-75. PMID 19709276 DOI: 10.1111/J.1574-6941.2002.Tb01006.X |
0.482 |
|
| 2002 |
Berg G, Roskot N, Steidle A, Eberl L, Zock A, Smalla K. Plant-dependent genotypic and phenotypic diversity of antagonistic rhizobacteria isolated from different Verticillium host plants. Applied and Environmental Microbiology. 68: 3328-38. PMID 12089011 DOI: 10.1128/Aem.68.7.3328-3338.2002 |
0.524 |
|
| 2002 |
Tauch A, Schneiker S, Selbitschka W, Pühler A, van Overbeek LS, Smalla K, Thomas CM, Bailey MJ, Forney LJ, Weightman A, Ceglowski P, Pembroke T, Tietze E, Schröder G, Lanka E, et al. The complete nucleotide sequence and environmental distribution of the cryptic, conjugative, broad-host-range plasmid pIPO2 isolated from bacteria of the wheat rhizosphere. Microbiology (Reading, England). 148: 1637-53. PMID 12055285 DOI: 10.1099/00221287-148-6-1637 |
0.494 |
|
| 2002 |
Heuer H, Kroppenstedt RM, Lottmann J, Berg G, Smalla K. Effects of T4 lysozyme release from transgenic potato roots on bacterial rhizosphere communities are negligible relative to natural factors. Applied and Environmental Microbiology. 68: 1325-35. PMID 11872484 DOI: 10.1128/Aem.68.3.1325-1335.2002 |
0.468 |
|
| 2002 |
Berg G, Fritze A, Roskot N, Smalla K. Evaluation of potential biocontrol rhizobacteria from different host plants of Verticillium dahliae Kleb. Journal of Applied Microbiology. 91: 963-71. PMID 11851803 DOI: 10.1046/J.1365-2672.2001.01462.X |
0.332 |
|
| 2002 |
Krasowiak R, Smalla K, Sokolov S, Kosheleva I, Sevastyanovich Y, Titok M, Thomas CM. PCR primers for detection and characterisation of IncP-9 plasmids Fems Microbiology Ecology. 42: 217-225. DOI: 10.1111/J.1574-6941.2002.Tb01011.X |
0.472 |
|
| 2002 |
Séveno NA, Kallifidas D, Smalla K, van Elsas JD, Collard J, Karagouni AD, Wellington EMH. Occurrence and reservoirs of antibiotic resistance genes in the environment Reviews in Medical Microbiology. 13: 15-27. DOI: 10.1097/00013542-200201000-00002 |
0.489 |
|
| 2002 |
Gomes NCM, Heuer H, Schönfeld J, Costa R, Mendonça-Hagler L, Smalla K. Bacterial diversity of the rhizosphere of maize (Zea mays) grown in tropical soil studied by temperature gradient gel electrophoresis Plant and Soil. 232: 167-180. DOI: 10.1007/978-94-010-0566-1_17 |
0.811 |
|
| 2001 |
Smalla K, Wieland G, Buchner A, Zock A, Parzy J, Kaiser S, Roskot N, Heuer H, Berg G. Bulk and rhizosphere soil bacterial communities studied by denaturing gradient gel electrophoresis: plant-dependent enrichment and seasonal shifts revealed. Applied and Environmental Microbiology. 67: 4742-51. PMID 11571180 DOI: 10.1128/Aem.67.10.4742-4751.2001 |
0.554 |
|
| 2001 |
Smalla K, Heuer H, Götz A, Niemeyer D, Krögerrecklenfort E, Tietze E. Exogenous isolation of antibiotic resistance plasmids from piggery manure slurries reveals a high prevalence and diversity of IncQ-like plasmids. Applied and Environmental Microbiology. 66: 4854-62. PMID 11055935 DOI: 10.1128/Aem.66.11.4854-4862.2000 |
0.453 |
|
| 2001 |
Marten P, Smalla K, Berg G. Genotypic and phenotypic differentiation of an antifungal biocontrol strain belonging to Bacillus subtilis. Journal of Applied Microbiology. 89: 463-71. PMID 11021578 DOI: 10.1046/J.1365-2672.2000.01136.X |
0.377 |
|
| 2001 |
Gomes NCM, Heuer H, Schönfeld J, Costa R, Mendonça-Hagler L, Smalla K. Plant and Soil. 232: 167-180. DOI: 10.1023/A:1010350406708 |
0.704 |
|
| 2000 |
Berg G, Kurze S, Buchner A, Wellington EM, Smalla K. Successful strategy for the selection of new strawberry-associated rhizobacteria antagonistic to Verticillium wilt Canadian Journal of Microbiology. 46: 1128-1137. PMID 11142403 DOI: 10.1139/W00-101 |
0.413 |
|
| 2000 |
Smalla K, Krögerrecklenfort E, Heuer H, Dejonghe W, Top E, Osborn M, Niewint J, Tebbe C, Barr M, Bailey M, Greated A, Thomas C, Turner S, Young P, Nikolakopoulou D, et al. PCR-based detection of mobile genetic elements in total community DNA. Microbiology (Reading, England). 146: 1256-1257. PMID 10846203 DOI: 10.1099/00221287-146-6-1256 |
0.355 |
|
| 2000 |
Nielsen KM, van Elsas JD, Smalla K. Transformation of Acinetobacter sp. strain BD413(pFG4DeltanptII) with transgenic plant DNA in soil microcosms and effects of kanamycin on selection of transformants. Applied and Environmental Microbiology. 66: 1237-42. PMID 10698801 DOI: 10.1128/Aem.66.3.1237-1242.2000 |
0.529 |
|
| 2000 |
Nielsen KM, Smalla K, van Elsas JD. Natural transformation of Acinetobacter sp. strain BD413 with cell lysates of Acinetobacter sp., Pseudomonas fluorescens, and Burkholderia cepacia in soil microcosms. Applied and Environmental Microbiology. 66: 206-12. PMID 10618225 DOI: 10.1128/Aem.66.1.206-212.2000 |
0.496 |
|
| 2000 |
Lin M, Smalla K, Heuer H, van Elsas J. Effect of an Alcaligenes faecalis inoculant strain on bacterial communities in flooded soil microcosms planted with rice seedlings Applied Soil Ecology. 15: 211-225. DOI: 10.1016/S0929-1393(00)00097-4 |
0.539 |
|
| 1999 |
Brim H, Heuer H, Krögerrecklenfort E, Mergeay M, Smalla K. Characterization of the bacterial community of a zinc-polluted soil Canadian Journal of Microbiology. 45: 326-338. PMID 10420584 DOI: 10.1139/cjm-45-4-326 |
0.444 |
|
| 1999 |
Berg G, Roskot N, Smalla K. Genotypic and Phenotypic Relationships between Clinical and Environmental Isolates of Stenotrophomonas maltophilia Journal of Clinical Microbiology. 37: 3594-3600. DOI: 10.1128/Jcm.37.11.3594-3600.1999 |
0.396 |
|
| 1999 |
Heuer H, Hartung K, Wieland G, Kramer I, Smalla K. Polynucleotide Probes That Target a Hypervariable Region of 16S rRNA Genes To Identify Bacterial Isolates Corresponding to Bands of Community Fingerprints Applied and Environmental Microbiology. 65: 1045-1049. DOI: 10.1128/Aem.65.3.1045-1049.1999 |
0.421 |
|
| 1999 |
Lottmann J, Heuer H, Smalla K, Berg G. Influence of transgenic T4-lysozyme-producing potato plants on potentially beneficial plant-associated bacteria Fems Microbiology Ecology. 29: 365-377. DOI: 10.1111/J.1574-6941.1999.Tb00627.X |
0.421 |
|
| 1999 |
Heuer H, Smalla K. Bacterial phyllosphere communities of Solanum tuberosum L. and T4-lysozyme-producing transgenic variants Fems Microbiology Ecology. 28: 357-371. DOI: 10.1111/J.1574-6941.1999.Tb00590.X |
0.464 |
|
| 1999 |
Gebhard F, Smalla K. Monitoring field releases of genetically modified sugar beets for persistence of transgenic plant DNA and horizontal gene transfer Fems Microbiology Ecology. 28: 261-272. DOI: 10.1111/J.1574-6941.1999.Tb00581.X |
0.502 |
|
| 1998 |
Smalla K, Wachtendorf U, Heuer H, Liu WT, Forney L. Analysis of BIOLOG GN Substrate Utilization Patterns by Microbial Communities. Applied and Environmental Microbiology. 64: 1220-5. PMID 16349535 DOI: 10.1128/Aem.64.4.1220-1225.1998 |
0.42 |
|
| 1998 |
Nielsen KM, Bones AM, Smalla K, van Elsas JD. Horizontal gene transfer from transgenic plants to terrestrial bacteria--a rare event? Fems Microbiology Reviews. 22: 79-103. PMID 9729765 DOI: 10.1111/J.1574-6976.1998.Tb00362.X |
0.445 |
|
| 1998 |
Gebhard F, Smalla K. Transformation of Acinetobacter sp. Strain BD413 by Transgenic Sugar Beet DNA Applied and Environmental Microbiology. 64: 1550-1554. DOI: 10.1128/Aem.64.4.1550-1554.1998 |
0.359 |
|
| 1998 |
Smalla K, Wachtendorf U, Heuer H, Liu W, Forney L. Analysis of BIOLOG GN Substrate Utilization Patterns by Microbial Communities Applied and Environmental Microbiology. 64: 1220-1225. DOI: 10.1128/aem.64.4.1220-1225.1998 |
0.307 |
|
| 1998 |
van Elsas J, Duarte G, Rosado A, Smalla K. Microbiological and molecular biological methods for monitoring microbial inoculants and their effects in the soil environment Journal of Microbiological Methods. 32: 133-154. DOI: 10.1016/S0167-7012(98)00025-6 |
0.406 |
|
| 1997 |
Heuer H, Krsek M, Baker P, Smalla K, Wellington EMH. Analysis of actinomycete communities by specific amplification of genes encoding 16S rRNA and gel-electrophoretic separation in denaturing gradients Applied and Environmental Microbiology. 63: 3233-3241. PMID 9251210 DOI: 10.1128/Aem.63.8.3233-3241.1997 |
0.496 |
|
| 1997 |
Glimm E, Heuer H, Engelen B, Smalla K, Backhaus H. Statistical comparisons of community catabolic profiles Journal of Microbiological Methods. 30: 71-80. DOI: 10.1016/S0167-7012(97)00046-8 |
0.393 |
|
| 1997 |
Heuer H, Smalla K. Evaluation of community-level catabolic profiling using BIOLOG GN microplates to study microbial community changes in potato phyllosphere Journal of Microbiological Methods. 30: 49-61. DOI: 10.1016/S0167-7012(97)00044-4 |
0.431 |
|
| 1997 |
Nielsen KM, Gebhard F, Smalla K, Bones AM, Van Elsas JD. Evaluation of possible horizontal gene transfer from transgenic plants to the soil bacterium Acinetobacter calcoaceticus BD413 Theoretical and Applied Genetics. 95: 815-821. DOI: 10.1007/S001220050630 |
0.478 |
|
| 1996 |
Götz A, Pukall R, Smit E, Tietze E, Prager R, Tschäpe H, van Elsas JD, Smalla K. Detection and characterization of broad-host-range plasmids in environmental bacteria by PCR. Applied and Environmental Microbiology. 62: 2621-2628. DOI: 10.1128/Aem.62.7.2621-2628.1996 |
0.382 |
|
| 1996 |
Pukall R, Tschäpe H, Smalla K. Monitoring the spread of broad host and narrow host range plasmids in soil microcosms Fems Microbiology Ecology. 20: 53-66. DOI: 10.1111/J.1574-6941.1996.Tb00304.X |
0.505 |
|
| 1994 |
Wendt-Potthoff K, Backhaus H, Smalla K. Monitoring the fate of genetically engineered bacteria sprayed on the phylloplane of bush beans and grass Fems Microbiology Ecology. 15: 279-290. DOI: 10.1111/J.1574-6941.1994.Tb00251.X |
0.442 |
|
| 1993 |
Smalla K, Overbeek L, Pukall R, Elsas J. Prevalence of nptII and Tn5 in kanamycin-resistant bacteria from different environments Fems Microbiology Ecology. 13: 47-58. DOI: 10.1111/J.1574-6941.1993.Tb00050.X |
0.509 |
|
| 1993 |
SMALLA K, PRAGER R, ISEMANN M, PUKALL R, TIETZE E, ELSAS JDV, TSCHÄPE H. Distribution of streptothricin acetyltransferase encodi determinants among environmental bacteria Molecular Ecology. 2: 27-33. DOI: 10.1111/J.1365-294X.1993.Tb00096.X |
0.454 |
|
| 1993 |
Smalla K, Cresswell N, Mendonca-Hagler L, Wolters A, Elsas Jv. Rapid DNA extraction protocol from soil for polymerase chain reaction-mediated amplification Journal of Applied Bacteriology. 74: 78-85. DOI: 10.1111/J.1365-2672.1993.Tb02999.X |
0.739 |
|
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