Thomas A. Walsh, PhD - Publications

Affiliations: 
2008-2013 Biotechnology Dublin City University, Dublin, County Dublin, Ireland 
Area:
adaptive evolution, bayesian networks, gene expression, placental tissues

34 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Morgan CC, Loughran NB, Walsh TA, Harrison AJ, O'Connell MJ. Erratum to: Positive selection neighboring functionally essential sites and disease-implicated regions of mammalian reproductive proteins. Bmc Evolutionary Biology. 17: 170. PMID 28732464 DOI: 10.1186/s12862-017-1015-y  0.64
2017 Lynch M, Walsh TA, Marszalowska I, Webb AE, Mac Aogáin M, Rogers TR, Windle H, Kelleher D, O'Connell MJ, Loscher CE. Erratum to: Surface layer proteins from virulent Clostridium difficile ribotypes exhibit signatures of positive selection with consequences for innate immune response. Bmc Evolutionary Biology. 17: 135. PMID 28606132 DOI: 10.1186/s12862-017-0990-3  0.64
2017 Lynch M, Walsh TA, Marszalowska I, Webb AE, MacAogain M, Rogers TR, Windle H, Kelleher D, O'Connell MJ, Loscher CE. Surface layer proteins from virulent Clostridium difficile ribotypes exhibit signatures of positive selection with consequences for innate immune response. Bmc Evolutionary Biology. 17: 90. PMID 28335725 DOI: 10.1186/S12862-017-0937-8  0.64
2015 Webb AE, Gerek ZN, Morgan CC, Walsh TA, Loscher CE, Edwards SV, O'Connell MJ. Adaptive Evolution as a Predictor of Species-Specific Innate Immune Response. Molecular Biology and Evolution. 32: 1717-29. PMID 25758009 DOI: 10.1093/Molbev/Msv051  0.64
2014 Walsh TA. Early stage hit triage for plant chemical genetic screens and target site identification. Methods in Molecular Biology (Clifton, N.J.). 1056: 191-199. PMID 24306874 DOI: 10.1007/978-1-62703-592-7_18  0.64
2013 Dmitriev P, Barat A, Polesskaya A, O'Connell MJ, Robert T, Dessen P, Walsh TA, Lazar V, Turki A, Carnac G, Laoudj-Chenivesse D, Lipinski M, Vassetzky YS. Simultaneous miRNA and mRNA transcriptome profiling of human myoblasts reveals a novel set of myogenic differentiation-associated miRNAs and their target genes. Bmc Genomics. 14: 265. PMID 23597168 DOI: 10.1186/1471-2164-14-265  0.64
2013 Shahedipour-Sandvik F, Leathersich J, Tompkins RP, Suvarna P, Tungare M, Walsh TA, Kirchner KW, Zhou S, Jones KA. Enhanced performance of an AlGaN/GaN high electron mobility transistor on Si by means of improved adatom diffusion length during MOCVD epitaxy Semiconductor Science and Technology. 28. DOI: 10.1088/0268-1242/28/7/074002  0.44
2013 Tompkins RP, Walsh TA, Derenge MA, Kirchner KW, Zhou S, Nguyen CB, Jones KA, Mulholland G, Metzger R, Leach JH, Suvarna P, Tungare M, Shahedipour-Sandvik F. HVPE GaN for high power electronic Schottky diodes Solid-State Electronics. 79: 238-243. DOI: 10.1016/J.Sse.2012.07.003  0.44
2013 Walsh TA, Metz JG. Producing the omega-3 fatty acids DHA and EPA in oilseed crops Lipid Technology. 25: 103-105. DOI: 10.1002/lite.201300270  0.64
2012 Morgan CC, Shakya K, Webb A, Walsh TA, Lynch M, Loscher CE, Ruskin HJ, O'Connell MJ. Colon cancer associated genes exhibit signatures of positive selection at functionally significant positions. Bmc Evolutionary Biology. 12: 114. PMID 22788692 DOI: 10.1186/1471-2148-12-114  0.64
2012 Tungare M, Leathersich JM, Tripathi N, Suvarna P, Shahedipour-Sandvik F, Walsh TA, Tompkins RP, Jones KA. Crack-free III-nitride structures (> 3.5 μm) on silicon Materials Research Society Symposium Proceedings. 1324: 9-15. DOI: 10.1557/Opl.2011.961  0.44
2012 Walsh TA, Schmitzer PR, Masters RA, Lo WC, Gast RE, Claus JS, Finkelstein BL. New Auxin Mimics and Herbicides Modern Crop Protection Compounds: Second Edition. 1: 277-304. DOI: 10.1002/9783527644179.ch5  0.64
2011 Tompkins RP, Walsh TA, Derenge MA, Kirchner KW, Zhou S, Nguyen CB, Jones KA, Suvarna P, Tungare M, Tripathi N, Shahedipour-Sandvik F. The effect of carbon impurities on lightly doped MOCVD GaN Schottky diodes Journal of Materials Research. 26: 2895-2900. DOI: 10.1557/Jmr.2011.360  0.44
2011 Wright T, Shan G, Walsh T, Peterson M. Reply to Egan et al.: Stewardship for herbicide-resistance crop technology Proceedings of the National Academy of Sciences of the United States of America. 108: E38. DOI: 10.1073/Pnas.1019670108  0.64
2010 Nguyen HT, Mishra G, Whittle E, Bevan SA, Merlo AO, Walsh TA, Shanklin J. Metabolic engineering of seeds can achieve levels of ω-7 fatty acids comparable with the highest levels found in natural plant sources Plant Physiology. 154: 1897-1904. PMID 20943853 DOI: 10.1104/Pp.110.165340  0.64
2010 O'Connell MJ, Loughran NB, Walsh TA, Donoghue MT, Schmid KJ, Spillane C. A phylogenetic approach to test for evidence of parental conflict or gene duplications associated with protein-encoding imprinted orthologous genes in placental mammals. Mammalian Genome : Official Journal of the International Mammalian Genome Society. 21: 486-98. PMID 20931201 DOI: 10.1007/S00335-010-9283-5  0.64
2010 Morgan CC, Loughran NB, Walsh TA, Harrison AJ, O'Connell MJ. Positive selection neighboring functionally essential sites and disease-implicated regions of mammalian reproductive proteins. Bmc Evolutionary Biology. 10: 39. PMID 20149245 DOI: 10.1186/1471-2148-10-39  0.64
2007 Walsh TA. The emerging field of chemical genetics: Potential applications for pesticide discovery Pest Management Science. 63: 1165-1171. PMID 17912687 DOI: 10.1002/ps.1452  0.64
2007 Walsh TA, Bauer T, Neal R, Merlo AO, Schmitzer PR, Hicks GR, Honma M, Matsumura W, Wolff K, Davies JP. Chemical genetic identification of glutamine phosphoribosylpyrophosphate amidotransferase as the target for a novel bleaching herbicide in Arabidopsis Plant Physiology. 144: 1292-1304. PMID 17616508 DOI: 10.1104/pp.107.099705  0.64
2007 Walsh TA. Chemical Genetic Approaches to Uncover New Sites of Pesticide Action Pesticide Chemistry: Crop Protection, Public Health, Environmental Safety. 285-294. DOI: 10.1002/9783527611249.ch30  0.64
2006 Walsh TA, Neal R, Merlo AO, Honma M, Hicks GR, Wolff K, Matsumura W, Davies JP. Mutations in an auxin receptor homolog AFB5 and in SGT1b confer resistance to synthetic picolinate auxins and not to 2,4-dichlorophenoxyacetic acid or indole-3-acetic acid in Arabidopsis Plant Physiology. 142: 542-552. PMID 16920877 DOI: 10.1104/pp.106.085969  0.64
2004 Yang C, Pflugrath JW, Camper DL, Foster ML, Pernich DJ, Walsh TA. Structural basis for herbicidal inhibitor selectivity revealed by comparison of crystal structures of plant and mammalian 4-hydroxyphenylpyruvate dioxygenases Biochemistry. 43: 10414-10423. PMID 15301540 DOI: 10.1021/bi049323o  0.64
2002 Vettakkorumakankav NN, Deshpande S, Walsh TA, Hall JC. Physiological effect of clopyralid on corn as determined by bioassay and light-scattering spectroscopy Weed Science. 50: 713-720. DOI: 10.1614/0043-1745(2002)050[0713:PEOCOC]2.0.CO;2  0.64
2001 Walsh TA, Green SB, Larrinua IM, Schmitzer PR. Characterization of plant β-ureidopropionase and functional overexpression in Escherichia coli Plant Physiology. 125: 1001-1011. PMID 11161056 DOI: 10.1104/pp.125.2.1001  0.64
1995 Strickland JA, Orr GL, Walsh TA. Inhibition of Diabrotica Larval Growth by Patatin, the Lipid Acyl Hydrolase from Potato Tubers. Plant Physiology. 109: 667-674. PMID 12228621  0.36
1995 Hey TD, Hartley M, Walsh TA. Maize ribosome-inactivating protein (b-32). Homologs in related species, effects on maize ribosomes, and modulation of activity by pro-peptide deletions Plant Physiology. 107: 1323-1332. PMID 7770526  0.64
1995 Strickland JA, Orr GL, Walsh TA. Inhibition of Diabrotica larval growth by patatin, the lipid acyl hydrolase from potato tubers Plant Physiology. 109: 667-674.  0.64
1994 Orr GL, Strickland JA, Walsh TA. Inhibition of Diabrotica larval growth by a multicystatin from potato tubers Journal of Insect Physiology. 40: 893-900. DOI: 10.1016/0022-1910(94)90023-X  0.64
1994 Bauer ME, Burk TE, Ek AR, Coppin PR, Lime SD, Walsh TA, Walters DK, Befort W, Heinzen DF. Satellite inventory of Minnesota forest resources Photogrammetric Engineering and Remote Sensing. 60: 287-298.  0.28
1993 Walsh TA, Strickland JA. Proteolysis of the 85-kilodalton crystalline cysteine proteinase inhibitor from potato releases functional cystatin domains Plant Physiology. 103: 1227-1234. PMID 8290629  0.64
1993 Waldron C, Wegrich LM, Ann Owens Merlo P, Walsh TA. Characterization of a genomic sequence coding for potato multicystatin, an eight-domain cysteine proteinase inhibitor Plant Molecular Biology. 23: 801-812. PMID 8251633 DOI: 10.1007/BF00021535  0.64
1991 Walsh TA, Morgan AE, Hey TD. Characterization and molecular cloning of a proenzyme form of a ribosome-inactivating protein from maize: Novel mechanism of proenzyme activation by proteolytic removal of a 2.8-kilodalton internal peptide segment Journal of Biological Chemistry. 266: 23422-23427. PMID 1744135  0.64
1991 Walsh TA, Twitched WP. Two Kunitz-type proteinase inhibitors from potato tubers Plant Physiology. 97: 15-18.  0.64
1989 Amateis RL, Burkhart HE, Walsh TA. Diameter increment and survival equations for loblolly pine trees growing in thinned and unthinned plantations on cutover, site- prepared lands Southern Journal of Applied Forestry. 13: 170-174.  0.56
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