François Lutzoni, Ph.D. - Publications

Biology Duke University, Durham, NC 

104 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Oita S, Ibáñez A, Lutzoni F, Miadlikowska J, Geml J, Lewis LA, Hom EFY, Carbone I, U'Ren JM, Arnold AE. Climate and seasonality drive the richness and composition of tropical fungal endophytes at a landscape scale. Communications Biology. 4: 313. PMID 33750915 DOI: 10.1038/s42003-021-01826-7  0.4
2020 Haridas S, Albert R, Binder M, Bloem J, LaButti K, Salamov A, Andreopoulos B, Baker SE, Barry K, Bills G, Bluhm BH, Cannon C, Castanera R, Culley DE, Daum C, ... ... Lutzoni F, et al. 101 genomes: A test case for predicting lifestyles and emergence of pathogens. Studies in Mycology. 96: 141-153. PMID 32206138 DOI: 10.1016/J.Simyco.2020.01.003  0.68
2019 U'Ren JM, Lutzoni F, Miadlikowska J, Zimmerman NB, Carbone I, May G, Arnold AE. Host availability drives distributions of fungal endophytes in the imperilled boreal realm. Nature Ecology & Evolution. PMID 31548643 DOI: 10.1038/S41559-019-0975-2  0.4
2019 Carbone I, White JB, Miadlikowska J, Arnold AE, Miller MA, Magain N, U'Ren JM, Lutzoni F. T-BAS Version 2.1: Tree-Based Alignment Selector Toolkit for Evolutionary Placement of DNA Sequences and Viewing Alignments and Specimen Metadata on Curated and Custom Trees. Microbiology Resource Announcements. 8. PMID 31320426 DOI: 10.1128/MRA.00328-19  0.4
2018 Lutzoni F, Nowak MD, Alfaro ME, Reeb V, Miadlikowska J, Krug M, Arnold AE, Lewis LA, Swofford DL, Hibbett D, Hilu K, James TY, Quandt D, Magallón S. Contemporaneous radiations of fungi and plants linked to symbiosis. Nature Communications. 9: 5451. PMID 30575731 DOI: 10.1038/S41467-018-07849-9  0.4
2018 Chen KH, Liao HL, Arnold AE, Bonito G, Lutzoni F. RNA-based analyses reveal fungal communities structured by a senescence gradient in the moss Dicranum scoparium and the presence of putative multi-trophic fungi. The New Phytologist. PMID 29604236 DOI: 10.1111/Nph.15092  0.4
2016 Chagnon PL, U'Ren JM, Miadlikowska J, Lutzoni F, Arnold AE. Erratum to: Interaction type influences ecological network structure more than local abiotic conditions: evidence from endophytic and endolichenic fungi at a continental scale. Oecologia. PMID 27106850 DOI: 10.1007/S00442-016-3589-2  0.4
2016 U'Ren JM, Miadlikowska J, Zimmerman NB, Lutzoni F, Stajich JE, Elizabeth Arnold A. Contributions of North American endophytes to the phylogeny, ecology, and taxonomy of Xylariaceae (Sordariomycetes, Ascomycota). Molecular Phylogenetics and Evolution. PMID 26903035 DOI: 10.1016/J.Ympev.2016.02.010  0.68
2015 Chagnon PL, U'Ren JM, Miadlikowska J, Lutzoni F, Elizabeth Arnold A. Interaction type influences ecological network structure more than local abiotic conditions: evidence from endophytic and endolichenic fungi at a continental scale. Oecologia. PMID 26420599 DOI: 10.1007/s00442-015-3457-5  0.68
2015 Gaya E, Fernández-Brime S, Vargas R, Lachlan RF, Gueidan C, Ramírez-Mejía M, Lutzoni F. The adaptive radiation of lichen-forming Teloschistaceae is associated with sunscreening pigments and a bark-to-rock substrate shift. Proceedings of the National Academy of Sciences of the United States of America. 112: 11600-5. PMID 26324894 DOI: 10.1073/Pnas.1507072112  0.68
2015 Chen KH, Miadlikowska J, Molnár K, Arnold AE, U'Ren JM, Gaya E, Gueidan C, Lutzoni F. Phylogenetic analyses of eurotiomycetous endophytes reveal their close affinities to Chaetothyriales, Eurotiales, and a new order - Phaeomoniellales. Molecular Phylogenetics and Evolution. 85: 117-30. PMID 25701073 DOI: 10.1016/J.Ympev.2015.01.008  0.68
2015 Darnajoux R, Lutzoni F, Miadlikowska J, Bellenger JP. Determination of elemental baseline using peltigeralean lichens from Northeastern Canada (Québec): Initial data collection for long term monitoring of the impact of global climate change on boreal and subarctic area in Canada Science of the Total Environment. 533: 1-7. DOI: 10.1016/j.scitotenv.2015.06.030  0.68
2015 Oono R, Lefèvre E, Simha A, Lutzoni F. A comparison of the community diversity of foliar fungal endophytes between seedling and adult loblolly pines (Pinus taeda) Fungal Biology. DOI: 10.1016/j.funbio.2015.07.003  0.68
2015 Gueidan C, Hill DJ, Miadlikowska J, Lutzoni F. Pezizomycotina: Lecanoromycetes The Mycota: a Comprehensive Treatise On Fungi as Experimental Systems For Basic and Applied Research: Vii Systematics and Evolution Part B 2nd Edition. 89-120. DOI: 10.1007/978-3-662-46011-5_4  0.68
2014 Oono R, Lutzoni F, Arnold AE, Kaye L, U'Ren JM, May G, Carbone I. Genetic variation in horizontally transmitted fungal endophytes of pine needles reveals population structure in cryptic species. American Journal of Botany. 101: 1362-74. PMID 25156984 DOI: 10.3732/Ajb.1400141  0.68
2014 Miadlikowska J, Richardson D, Magain N, Ball B, Anderson F, Cameron R, Lendemer J, Truong C, Lutzoni F. Phylogenetic placement, species delimitation, and cyanobiont identity of endangered aquatic Peltigera species (lichen-forming Ascomycota, Lecanoromycetes). American Journal of Botany. 101: 1141-1156. PMID 25016011 DOI: 10.3732/Ajb.1400267  0.68
2014 Miadlikowska J, Kauff F, Högnabba F, Oliver JC, Molnár K, Fraker E, Gaya E, Hafellner J, Hofstetter V, Gueidan C, Otálora MA, Hodkinson B, Kukwa M, Lücking R, Björk C, ... ... Lutzoni F, et al. A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families. Molecular Phylogenetics and Evolution. 79: 132-68. PMID 24747130 DOI: 10.1016/J.Ympev.2014.04.003  0.68
2014 Darnajoux R, Constantin J, Miadlikowska J, Lutzoni F, Bellenger JP. Is vanadium a biometal for boreal cyanolichens? The New Phytologist. 202: 765-71. PMID 24641550 DOI: 10.1111/Nph.12777  0.68
2014 Hodkinson BP, Allen JL, Forrest LL, Goffinet B, Sérusiaux E, Andrésson OS, Miao V, Bellenger JP, Lutzoni F. Lichen-symbiotic cyanobacteria associated with Peltigera have an alternative vanadium-dependent nitrogen fixation system European Journal of Phycology. 49: 11-19. DOI: 10.1080/09670262.2013.873143  0.68
2013 McDonald TR, Mueller O, Dietrich FS, Lutzoni F. High-throughput genome sequencing of lichenizing fungi to assess gene loss in the ammonium transporter/ammonia permease gene family. Bmc Genomics. 14: 225. PMID 23557360 DOI: 10.1186/1471-2164-14-225  0.68
2013 O'Brien HE, Miadlikowska J, Lutzoni F. Assessing population structure and host specialization in lichenized cyanobacteria. The New Phytologist. 198: 557-66. PMID 23406441 DOI: 10.1111/Nph.12165  0.68
2013 Fernández-Brime S, Llimona X, Lutzoni F, Gaya E. Phylogenetic study of Diploschistes (lichen-forming Ascomycota: Ostropales: Graphidaceae), based on morphological, chemical, and molecular data Taxon. 62: 267-280. DOI: 10.12705/622.10  0.68
2013 McDonald TR, Gaya E, Lutzoni F. Twenty-five cultures of lichenizing fungi available for experimental studies on symbiotic systems Symbiosis. 59: 165-171. DOI: 10.1007/S13199-013-0228-0  0.68
2012 Gazis R, Miadlikowska J, Lutzoni F, Arnold AE, Chaverri P. Culture-based study of endophytes associated with rubber trees in Peru reveals a new class of Pezizomycotina: Xylonomycetes. Molecular Phylogenetics and Evolution. 65: 294-304. PMID 22772026 DOI: 10.1016/J.Ympev.2012.06.019  0.68
2012 U'Ren JM, Lutzoni F, Miadlikowska J, Laetsch AD, Arnold AE. Host and geographic structure of endophytic and endolichenic fungi at a continental scale. American Journal of Botany. 99: 898-914. PMID 22539507 DOI: 10.3732/Ajb.1100459  0.68
2012 Geml J, Kauff F, Brochmann C, Lutzoni F, Laursen GA, Redhead SA, Taylor DL. Frequent circumarctic and rare transequatorial dispersals in the lichenised agaric genus Lichenomphalia (Hygrophoraceae, Basidiomycota). Fungal Biology. 116: 388-400. PMID 22385621 DOI: 10.1016/J.Funbio.2011.12.009  0.68
2012 Gaya E, Högnabba F, Holguin A, Molnar K, Fernández-Brime S, Stenroos S, Arup U, Søchting U, Van den Boom P, Lücking R, Sipman HJ, Lutzoni F. Implementing a cumulative supermatrix approach for a comprehensive phylogenetic study of the Teloschistales (Pezizomycotina, Ascomycota). Molecular Phylogenetics and Evolution. 63: 374-87. PMID 22306043 DOI: 10.1016/J.Ympev.2012.01.012  0.68
2012 Hodkinson BP, Gottel NR, Schadt CW, Lutzoni F. Photoautotrophic symbiont and geography are major factors affecting highly structured and diverse bacterial communities in the lichen microbiome. Environmental Microbiology. 14: 147-61. PMID 21906220 DOI: 10.1111/J.1462-2920.2011.02560.X  0.68
2012 McDonald TR, Dietrich FS, Lutzoni F. Multiple horizontal gene transfers of ammonium transporters/ammonia permeases from prokaryotes to eukaryotes: toward a new functional and evolutionary classification. Molecular Biology and Evolution. 29: 51-60. PMID 21680869 DOI: 10.1093/Molbev/Msr123  0.68
2012 Liwa L, Miadlikowska J, Redelings BD, Molnar K, Lutzoni F. Are widespread morphospecies from the Lecanora dispersa group (lichen-forming Ascomycota) monophyletic? Bryologist. 115: 265-277. DOI: 10.1639/0007-2745-115.2.265  0.68
2011 Schmull M, Miadlikowska J, Pelzer M, Stocker-Wörgötter E, Hofstetter V, Fraker E, Hodkinson BP, Reeb V, Kukwa M, Lumbsch HT, Kauff F, Lutzoni F. Phylogenetic affiliations of members of the heterogeneous lichen-forming fungi of the genus Lecidea sensu Zahlbruckner (Lecanoromycetes, Ascomycota). Mycologia. 103: 983-1003. PMID 21642348 DOI: 10.3852/10-234  0.68
2011 Fernández-Brime S, Llimona X, Molnar K, Stenroos S, Högnabba F, Björk C, Lutzoni F, Gaya E. Expansion of the Stictidaceae by the addition of the saxicolous lichen-forming genus Ingvariella. Mycologia. 103: 755-63. PMID 21471292 DOI: 10.3852/10-287  0.68
2011 Gaya E, Redelings BD, Navarro-Rosinés P, Llimona X, De Cáceres M, Lutzoni F. Align or not to align? Resolving species complexes within the Caloplaca saxicola group as a case study. Mycologia. 103: 361-78. PMID 21139031 DOI: 10.3852/10-120  0.68
2011 Hestmark G, Miadlikowska J, Kauff F, Fraker E, Molnar K, Lutzoni F. Single origin and subsequent diversification of central Andean endemic Umbilicaria species. Mycologia. 103: 45-56. PMID 20943548 DOI: 10.3852/10-012  0.68
2011 Joneson S, Armaleo D, Lutzoni F. Fungal and algal gene expression in early developmental stages of lichen-symbiosis. Mycologia. 103: 291-306. PMID 20943535 DOI: 10.3852/10-064  0.68
2011 Miadlikowska J, Schoch CL, Kageyama SA, Molnar K, Lutzoni F, McCune B. Hypogymnia phylogeny, including Cavernularia, reveals biogeographic structure Bryologist. 114: 392-400. DOI: 10.1639/0007-2745-114.2.392  0.68
2010 U'ren JM, Lutzoni F, Miadlikowska J, Arnold AE. Community analysis reveals close affinities between endophytic and endolichenic fungi in mosses and lichens. Microbial Ecology. 60: 340-53. PMID 20625714 DOI: 10.1007/S00248-010-9698-2  0.68
2010 Otálora MA, Martínez I, O'Brien H, Molina MC, Aragón G, Lutzoni F. Multiple origins of high reciprocal symbiotic specificity at an intercontinental spatial scale among gelatinous lichens (Collemataceae, Lecanoromycetes). Molecular Phylogenetics and Evolution. 56: 1089-95. PMID 20493269 DOI: 10.1016/J.Ympev.2010.05.013  0.68
2010 Prieto M, Martínez I, Aragón G, Otálora MA, Lutzoni F. Phylogenetic study of Catapyrenium s. str. (Verrucariaceae, lichen-forming Ascomycota) and related genus Placidiopsis. Mycologia. 102: 291-304. PMID 20361497 DOI: 10.3852/09-168  0.68
2010 Otálora MA, Aragón G, Molina MC, Martínez I, Lutzoni F. Disentangling the Collema-Leptogium complex through a molecular phylogenetic study of the Collemataceae (Peltigerales, lichen-forming Ascomycota). Mycologia. 102: 279-90. PMID 20361496 DOI: 10.3852/09-114  0.68
2009 Arnold AE, Miadlikowska J, Higgins KL, Sarvate SD, Gugger P, Way A, Hofstetter V, Kauff F, Lutzoni F. A phylogenetic estimation of trophic transition networks for ascomycetous fungi: are lichens cradles of symbiotrophic fungal diversification? Systematic Biology. 58: 283-97. PMID 20525584 DOI: 10.1093/Sysbio/Syp001  0.68
2009 Schoch CL, Sung GH, López-Giráldez F, Townsend JP, Miadlikowska J, Hofstetter V, Robbertse B, Matheny PB, Kauff F, Wang Z, Gueidan C, Andrie RM, Trippe K, Ciufetti LM, Wynns A, ... ... Lutzoni F, et al. The Ascomycota tree of life: a phylum-wide phylogeny clarifies the origin and evolution of fundamental reproductive and ecological traits. Systematic Biology. 58: 224-39. PMID 20525580 DOI: 10.1093/Sysbio/Syp020  0.68
2009 Ruibal C, Gueidan C, Selbmann L, Gorbushina AA, Crous PW, Groenewald JZ, Muggia L, Grube M, Isola D, Schoch CL, Staley JT, Lutzoni F, de Hoog GS. Phylogeny of rock-inhabiting fungi related to Dothideomycetes. Studies in Mycology. 64: 123-133S7. PMID 20169026 DOI: 10.3114/Sim.2009.64.06  0.68
2009 McLaughlin DJ, Hibbett DS, Lutzoni F, Spatafora JW, Vilgalys R. The search for the fungal tree of life. Trends in Microbiology. 17: 488-97. PMID 19782570 DOI: 10.1016/J.Tim.2009.08.001  0.68
2009 Lutzoni F, Miadlikowska J. Lichens. Current Biology : Cb. 19: R502-3. PMID 19602407 DOI: 10.1016/j.cub.2009.04.034  0.68
2009 O'Brien HE, Miadlikowska J, Lutzoni F. Assessing reproductive isolation in highly diverse communities of the lichen-forming fungal genus peltigera. Evolution; International Journal of Organic Evolution. 63: 2076-86. PMID 19453383 DOI: 10.1111/J.1558-5646.2009.00685.X  0.68
2009 Ertz D, Miadlikowska J, Lutzoni F, Dessein S, Raspé O, Vigneron N, Hofstetter V, Diederich P. Towards a new classification of the Arthoniales (Ascomycota) based on a three-gene phylogeny focussing on the genus Opegrapha. Mycological Research. 113: 141-52. PMID 18929650 DOI: 10.1016/J.Mycres.2008.09.002  0.68
2009 Hodkinson BP, Lutzoni F. A microbiotic survey of lichen-associated bacteria reveals a new lineage from the Rhizobiales Symbiosis. 49: 163-180. DOI: 10.1007/S13199-009-0049-3  0.68
2009 Joneson S, Lutzoni F. Compatibility and thigmotropism in the lichen symbiosis: A reappraisal Symbiosis. 47: 109-115. DOI: 10.1007/Bf03182294  0.68
2009 Gueidan C, Savić S, Thüs H, Roux C, Keller C, Tibell L, Prieto M, Heiomarsson S, Breuss O, Orange A, Fröberg L, Wynns AA, Navarro-Rosinés P, Krzewicka B, Pykälä J, ... ... Lutzoni F, et al. Generic classification of the Verrucariaceae (Ascomycota) based on molecular and morphological evidence: Recent progress and remaining challenges Taxon. 58: 184-208. DOI: 10.1002/Tax.581019  0.68
2008 Gueidan C, Villaseñor CR, de Hoog GS, Gorbushina AA, Untereiner WA, Lutzoni F. A rock-inhabiting ancestor for mutualistic and pathogen-rich fungal lineages. Studies in Mycology. 61: 111-9. PMID 19287533 DOI: 10.3114/Sim.2008.61.11  0.68
2008 Savi? S, Tibell L, Gueidan C, Lutzoni F. Molecular phylogeny and systematics of Polyblastia (Verrucariaceae, Eurotiomycetes) and allied genera. Mycological Research. 112: 1307-18. PMID 18945603 DOI: 10.1016/J.Mycres.2008.05.002  0.68
2008 Gaya E, Navarro-Rosinés P, Llimona X, Hladun N, Lutzoni F. Phylogenetic reassessment of the Teloschistaceae (lichen-forming Ascomycota, Lecanoromycetes). Mycological Research. 112: 528-46. PMID 18406120 DOI: 10.1016/J.Mycres.2007.11.005  0.68
2008 Amtoft A, Lutzoni F, Miadlikowska J. Dermatocarpon (Verrucariaceae) in the Ozark Highlands, North America Bryologist. 111: 1-40. DOI: 10.1639/0007-2745(2008)111[1:Dvitoh]2.0.Co;2  0.68
2008 Otálora MAG, Martínez I, Molina MC, Aragón G, Lutzoni F. Phylogenetic relationships and taxonomy of the Leptogium lichenoides group (Collemataceae, Ascomycota) in Europe Taxon. 57: 907-921. DOI: 10.1002/Tax.573019  0.68
2007 Gueidan C, Roux C, Lutzoni F. Using a multigene phylogenetic analysis to assess generic delineation and character evolution in Verrucariaceae (Verrucariales, Ascomycota). Mycological Research. 111: 1145-68. PMID 17981450 DOI: 10.1016/J.Mycres.2007.08.010  0.68
2007 Arnold AE, Henk DA, Eells RL, Lutzoni F, Vilgalys R. Diversity and phylogenetic affinities of foliar fungal endophytes in loblolly pine inferred by culturing and environmental PCR. Mycologia. 99: 185-206. PMID 17682771 DOI: 10.3852/Mycologia.99.2.185  0.68
2007 Hibbett DS, Binder M, Bischoff JF, Blackwell M, Cannon PF, Eriksson OE, Huhndorf S, James T, Kirk PM, Lücking R, Thorsten Lumbsch H, Lutzoni F, Matheny PB, McLaughlin DJ, Powell MJ, et al. A higher-level phylogenetic classification of the Fungi. Mycological Research. 111: 509-47. PMID 17572334 DOI: 10.1016/J.Mycres.2007.03.004  0.68
2007 Kauff F, Cox CJ, Lutzoni F. WASABI: an automated sequence processing system for multigene phylogenies. Systematic Biology. 56: 523-31. PMID 17562476 DOI: 10.1080/10635150701395340  0.68
2007 Arnold AE, Lutzoni F. Diversity and host range of foliar fungal endophytes: are tropical leaves biodiversity hotspots? Ecology. 88: 541-9. PMID 17503580 DOI: 10.1890/05-1459  0.68
2007 Rydholm C, Dyer PS, Lutzoni F. DNA sequence characterization and molecular evolution of MAT1 and MAT2 mating-type loci of the self-compatible ascomycete mold Neosartorya fischeri. Eukaryotic Cell. 6: 868-74. PMID 17384199 DOI: 10.1128/Ec.00319-06  0.68
2007 Reeb V, Haugen P, Bhattacharya D, Lutzoni F. Evolution of Pleopsidium (lichenized Ascomycota) S943 group I introns and the phylogeography of an intron-encoded putative homing endonuclease. Journal of Molecular Evolution. 64: 285-98. PMID 17294323 DOI: 10.1007/S00239-005-0179-Z  0.68
2007 Hofstetter V, Miadlikowska J, Kauff F, Lutzoni F. Phylogenetic comparison of protein-coding versus ribosomal RNA-coding sequence data: a case study of the Lecanoromycetes (Ascomycota). Molecular Phylogenetics and Evolution. 44: 412-26. PMID 17207641 DOI: 10.1016/J.Ympev.2006.10.016  0.68
2007 Higgins KL, Arnold AE, Miadlikowska J, Sarvate SD, Lutzoni F. Phylogenetic relationships, host affinity, and geographic structure of boreal and arctic endophytes from three major plant lineages. Molecular Phylogenetics and Evolution. 42: 543-55. PMID 17005421 DOI: 10.1016/J.Ympev.2006.07.012  0.68
2007 Litaker RW, Vandersea MW, Kibler SR, Reece KS, Stokes NA, Lutzoni FM, Yonish BA, West MA, Black MND, Tester PA. Recognizing dinoflagellate species using its rDNA sequences Journal of Phycology. 43: 344-355. DOI: 10.1111/J.1529-8817.2007.00320.X  0.68
2006 Miadlikowska J, Kauff F, Hofstetter V, Fraker E, Grube M, Hafellner J, Reeb V, Hodkinson BP, Kukwa M, Lücking R, Hestmark G, Otalora MG, Rauhut A, Büdel B, Scheidegger C, ... ... Lutzoni F, et al. New insights into classification and evolution of the Lecanoromycetes (Pezizomycotina, Ascomycota) from phylogenetic analyses of three ribosomal RNA- and two protein-coding genes. Mycologia. 98: 1088-103. PMID 17486983 DOI: 10.3852/Mycologia.98.6.1088  0.68
2006 Geiser DM, Gueidan C, Miadlikowska J, Lutzoni F, Kauff F, Hofstetter V, Fraker E, Schoch CL, Tibell L, Untereiner WA, Aptroot A. Eurotiomycetes: Eurotiomycetidae and Chaetothyriomycetidae. Mycologia. 98: 1053-64. PMID 17486980 DOI: 10.3852/Mycologia.98.6.1053  0.68
2006 Spatafora JW, Sung GH, Johnson D, Hesse C, O'Rourke B, Serdani M, Spotts R, Lutzoni F, Hofstetter V, Miadlikowska J, Reeb V, Gueidan C, Fraker E, Lumbsch T, Lücking R, et al. A five-gene phylogeny of Pezizomycotina. Mycologia. 98: 1018-28. PMID 17486977 DOI: 10.3852/Mycologia.98.6.1018  0.68
2006 James TY, Kauff F, Schoch CL, Matheny PB, Hofstetter V, Cox CJ, Celio G, Gueidan C, Fraker E, Miadlikowska J, Lumbsch HT, Rauhut A, Reeb V, Arnold AE, Amtoft A, ... ... Lutzoni F, et al. Reconstructing the early evolution of Fungi using a six-gene phylogeny. Nature. 443: 818-22. PMID 17051209 DOI: 10.1038/Nature05110  0.68
2006 Fernández FA, Miller AN, Huhndorf SM, Lutzoni FM, Zoller S. Systematics of the genus Chaetosphaeria and its allied genera: morphological and phylogenetic diversity in north temperate and neotropical taxa. Mycologia. 98: 121-30. PMID 16800310 DOI: 10.3852/mycologia.98.1.121  0.68
2006 Rydholm C, Szakacs G, Lutzoni F. Low genetic variation and no detectable population structure in aspergillus fumigatus compared to closely related Neosartorya species. Eukaryotic Cell. 5: 650-7. PMID 16607012 DOI: 10.1128/Ec.5.4.650-657.2006  0.68
2005 Bhattacharya D, Reeb V, Simon DM, Lutzoni F. Phylogenetic analyses suggest reverse splicing spread of group I introns in fungal ribosomal DNA. Bmc Evolutionary Biology. 5: 68. PMID 16300679 DOI: 10.1186/1471-2148-5-68  0.68
2005 Paoletti M, Rydholm C, Schwier EU, Anderson MJ, Szakacs G, Lutzoni F, Debeaupuis JP, Latgé JP, Denning DW, Dyer PS. Evidence for sexuality in the opportunistic fungal pathogen Aspergillus fumigatus. Current Biology : Cb. 15: 1242-8. PMID 16005299 DOI: 10.1016/J.Cub.2005.05.045  0.68
2005 O'Brien HE, Miadlikowska J, Lutzoni F. Assessing host specialization in symbiotic cyanobacteria associated with four closely related species of the lichen fungus Peltigera European Journal of Phycology. 40: 363-378. DOI: 10.1080/09670260500342647  0.68
2004 Miadlikowska J, Lutzoni F. Phylogenetic classification of peltigeralean fungi (Peltigerales, Ascomycota) based on ribosomal RNA small and large subunits. American Journal of Botany. 91: 449-64. PMID 21653401 DOI: 10.3732/Ajb.91.3.449  0.68
2004 Lutzoni F, Kauff F, Cox CJ, McLaughlin D, Celio G, Dentinger B, Padamsee M, Hibbett D, James TY, Baloch E, Grube M, Reeb V, Hofstetter V, Schoch C, Arnold AE, et al. Assembling the fungal tree of life: progress, classification, and evolution of subcellular traits. American Journal of Botany. 91: 1446-80. PMID 21652303 DOI: 10.3732/Ajb.91.10.1446  0.68
2004 Reeb V, Lutzoni F, Roux C. Contribution of RPB2 to multilocus phylogenetic studies of the euascomycetes (Pezizomycotina, Fungi) with special emphasis on the lichen-forming Acarosporaceae and evolution of polyspory. Molecular Phylogenetics and Evolution. 32: 1036-60. PMID 15288074 DOI: 10.1016/J.Ympev.2004.04.012  0.68
2004 Haugen P, Reeb V, Lutzoni F, Bhattacharya D. The evolution of homing endonuclease genes and group I introns in nuclear rDNA. Molecular Biology and Evolution. 21: 129-40. PMID 14595099 DOI: 10.1093/Molbev/Msh005  0.68
2003 Gaya E, Lutzoni F, Zoller S, Navarro-Rosinés P. Phylogenetic study of Fulgensia and allied Caloplaca and Xanthoria species (Teloschistaceae, lichen-forming ascomycota). American Journal of Botany. 90: 1095-103. PMID 21659209 DOI: 10.3732/Ajb.90.7.1095  0.68
2003 Miadlikowska J, Lutzoni F, Goward T, Zoller S, Posada D. New approach to an old problem: Incorporating signal from gap-rich regions of ITS and rDNA large subunit into phylogenetic analyses to resolve the Peltigera canina species complex. Mycologia. 95: 1181-203. PMID 21149020 DOI: 10.1080/15572536.2004.11833027  0.68
2003 Søchting U, Lutzoni F. Molecular phylogenetic study at the generic boundary between the lichen-forming fungi Caloplaca and Xanthoria (Ascomycota, Teloschistaceae). Mycological Research. 107: 1266-76. PMID 15000229 DOI: 10.1017/S0953756203008529  0.68
2003 Zoller S, Lutzoni F. Slow algae, fast fungi: exceptionally high nucleotide substitution rate differences between lichenized fungi Omphalina and their symbiotic green algae Coccomyxa. Molecular Phylogenetics and Evolution. 29: 629-40. PMID 14615198 DOI: 10.1016/S1055-7903(03)00215-X  0.68
2003 Alfaro ME, Zoller S, Lutzoni F. Bayes or bootstrap? A simulation study comparing the performance of Bayesian Markov chain Monte Carlo sampling and bootstrapping in assessing phylogenetic confidence. Molecular Biology and Evolution. 20: 255-66. PMID 12598693 DOI: 10.1093/Molbev/Msg028  0.68
2003 McDonald T, Miadlikowska J, Lutzoni F. The lichen genus Sticta in the Great Smoky Mountains: A phylogenetic study of morphological, chemical, and molecular data Bryologist. 106: 61-79. DOI: 10.1639/0007-2745(2003)106[0061:Tlgsit]2.0.Co;2  0.68
2002 Kauff F, Lutzoni F. Phylogeny of the Gyalectales and Ostropales (Ascomycota, Fungi): among and within order relationships based on nuclear ribosomal RNA small and large subunits. Molecular Phylogenetics and Evolution. 25: 138-56. PMID 12383757 DOI: 10.1016/S1055-7903(02)00214-2  0.68
2002 Barker FK, Lutzoni FM. The utility of the incongruence length difference test. Systematic Biology. 51: 625-37. PMID 12228004 DOI: 10.1080/10635150290102302  0.68
2002 Miadlikowska J, McCune B, Lutzoni F. Pseudocyphellaria perpetua, a new lichen from western North America Bryologist. 105: 1-10. DOI: 10.1639/0007-2745(2002)105[0001:Ppanlf]2.0.Co;2  0.68
2002 Redhead SA, Lutzoni F, Moncalvo JM, Vilgalys R. Phylogeny of agarics: Partial systematics solutions for core Omphalinoid genera in the Agaricales (Euagarics) Mycotaxon. 83: 19-57.  0.68
2001 Lutzoni F, Pagel M, Reeb V. Major fungal lineages are derived from lichen symbiotic ancestors. Nature. 411: 937-40. PMID 11418855 DOI: 10.1038/35082053  0.68
2001 O'Donnell K, Lutzoni FM, Ward TJ, Benny GL. Evolutionary relationships among mucoralean fungi (Zygomycota): Evidence for family polyphyly on a large scale Mycologia. 93: 286-296.  0.68
2000 Moncalvo JM, Lutzoni FM, Rehner SA, Johnson J, Vilgalys R. Phylogenetic relationships of agaric fungi based on nuclear large subunit ribosomal DNA sequences. Systematic Biology. 49: 278-305. PMID 12118409 DOI: 10.1093/Sysbio/49.2.278  0.68
2000 Lutzoni F, Wagner P, Reeb V, Zoller S. Integrating ambiguously aligned regions of DNA sequences in phylogenetic analyses without violating positional homology. Systematic Biology. 49: 628-51. PMID 12116431 DOI: 10.1080/106351500750049743  0.68
2000 Bhattacharya D, Lutzoni F, Reeb V, Simon D, Nason J, Fernandez F. Widespread occurrence of spliceosomal introns in the rDNA genes of ascomycetes. Molecular Biology and Evolution. 17: 1971-84. PMID 11110913 DOI: 10.1093/Oxfordjournals.Molbev.A026298  0.68
2000 Wu QX, Mueller GM, Lutzoni FM, Huang YQ, Guo SY. Phylogenetic and biogeographic relationships of eastern Asian and eastern North American disjunct Suillus species (fungi) as inferred from nuclear ribosomal RNA ITS sequences. Molecular Phylogenetics and Evolution. 17: 37-47. PMID 11020303 DOI: 10.1006/Mpev.2000.0812  0.68
2000 Miadlikowska J, Lutzoni F. Phylogenetic revision of the genus Peltigera (lichen-forming Ascomycota) based on morphological, chemical, and large subunit nuclear ribosomal DNA data International Journal of Plant Sciences. 161: 925-958. DOI: 10.1086/317568  0.68
1999 Lutzoni F, Barker FK. Sampling confidence envelopes of phylogenetic trees for combinability testing: a reply to Rodrigo. Systematic Biology. 48: 596-603. PMID 12066295 DOI: 10.1080/106351599260166  0.68
1999 Zoller S, Lutzoni F, Scheidegger C. Genetic variation within and among populations of the threatened lichen Lobaria pulmonaria in Switzerland and implications for its conservation. Molecular Ecology. 8: 2049-59. PMID 10632856 DOI: 10.1046/J.1365-294X.1999.00820.X  0.68
1999 Fernández FA, Lutzoni FM, Huhndorf SM. Teleomorph-anamorph connections: The new pyrenomycetous genus Carpoligna and its Pleurothecium anamorph Mycologia. 91: 251-262.  0.68
1997 Lutzoni FM. Phylogeny of lichen- and non-lichen-forming omphalinoid mushrooms and the utility of testing for combinability among multiple data sets. Systematic Biology. 46: 373-406. PMID 11975328  0.68
1997 Lutzoni F, Pagel M. Accelerated evolution ass consequence of transitions to mutualism Proceedings of the National Academy of Sciences of the United States of America. 94: 11422-11427. DOI: 10.1073/pnas.94.21.11422  0.68
1995 Lutzoni FM, Brodo IM. A generic redelimitation of the Ionaspis-Hymenelia complex (lichenized ascomycotina) Systematic Botany. 20: 224-258.  0.68
1994 Lutzoni FM, Brodo IM. Proposal to conserve the name Gyalecta suaveolens Fr. (lichenized Ascomycota) with a conserved type Taxon. 43: 657-659.  0.68
1994 Lutzoni FM. Ionaspis alba (Ascomycotina, Hymeneliaceae), a new lichen species from eastern North America Bryologist. 97: 393-395.  0.68
1988 Sirois L, Lutzoni F, Grandtner MM. Lichens on serpentine and amphibolite on the plateau of Mt. Albert, Gaspesie, Quebec | Les lichens sur serpentine et amphibolite du plateau du mont Albert, Gaspesie, Quebec Canadian Journal of Botany. 66: 851-862.  0.68
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