Brian R. Moore, Ph.D. - Publications

Affiliations: 
University of California, Davis University of California, Davis, Davis, CA 
Area:
Phylogenetics
Website:
http://www.phylodiversity.net/bmoore/

24 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Gao J, May MR, Rannala B, Moore BR. Model misspecification misleads inference of the spatial dynamics of disease outbreaks. Proceedings of the National Academy of Sciences of the United States of America. 120: e2213913120. PMID 36897983 DOI: 10.1073/pnas.2213913120  0.772
2023 Gao J, May MR, Rannala B, Moore BR. PrioriTree: a utility for improving phylodynamic analyses in BEAST. Bioinformatics (Oxford, England). 39. PMID 36592035 DOI: 10.1093/bioinformatics/btac849  0.774
2022 Gao J, May MR, Rannala B, Moore BR. New Phylogenetic Models Incorporating Interval-Specific Dispersal Dynamics Improve Inference of Disease Spread. Molecular Biology and Evolution. PMID 35861314 DOI: 10.1093/molbev/msac159  0.787
2020 Thompson A, May MR, Moore BR, Kopp A. A hierarchical Bayesian mixture model for inferring the expression state of genes in transcriptomes. Proceedings of the National Academy of Sciences of the United States of America. PMID 32709743 DOI: 10.1073/Pnas.1919748117  0.647
2019 May MR, Moore BR. A Bayesian Approach for Inferring the Impact of a Discrete Character on Rates of Continuous-Character Evolution in the Presence of Background-Rate Variation. Systematic Biology. PMID 31665487 DOI: 10.1093/Sysbio/Syz069  0.698
2018 Turelli M, Cooper BS, Richardson KM, Ginsberg PS, Peckenpaugh B, Antelope CX, Kim KJ, May MR, Abrieux A, Wilson DA, Bronski MJ, Moore BR, Gao JJ, Eisen MB, Chiu JC, et al. Rapid Global Spread of wRi-like Wolbachia across Multiple Drosophila. Current Biology : Cb. PMID 29526588 DOI: 10.1016/J.Cub.2018.02.015  0.651
2016 Moore BR, Höhna S, May MR, Rannala B, Huelsenbeck JP. Critically evaluating the theory and performance of Bayesian analysis of macroevolutionary mixtures. Proceedings of the National Academy of Sciences of the United States of America. PMID 27512038 DOI: 10.1073/Pnas.1518659113  0.768
2016 Höhna S, Landis MJ, Heath TA, Boussau B, Lartillot N, Moore BR, Huelsenbeck JP, Ronquist F. RevBayes: Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language. Systematic Biology. PMID 27235697 DOI: 10.1093/Sysbio/Syw021  0.711
2016 May MR, Moore BR. How Well Can We Detect Lineage-Specific Diversification-Rate Shifts? A Simulation Study of Sequential AIC Methods. Systematic Biology. PMID 27037081 DOI: 10.1093/Sysbio/Syw026  0.748
2016 May MR, Höhna S, Moore BR. A Bayesian approach for detecting the impact of mass-extinction events on molecular phylogenies when rates of lineage diversification may vary Methods in Ecology and Evolution. DOI: 10.1111/2041-210X.12563  0.705
2015 Höhna S, May MR, Moore BR. TESS: An R package for efficiently simulating phylogenetic trees and performing Bayesian inference of lineage diversification rates. Bioinformatics (Oxford, England). PMID 26543171 DOI: 10.1093/Bioinformatics/Btv651  0.741
2015 Alkhamis MA, Moore BR, Perez AM. Phylodynamics of H5N1 Highly Pathogenic Avian Influenza in Europe, 2005-2010: Potential for Molecular Surveillance of New Outbreaks. Viruses. 7: 3310-28. PMID 26110587 DOI: 10.3390/V7062773  0.362
2014 Magee AF, May MR, Moore BR. The dawn of open access to phylogenetic data. Plos One. 9: e110268. PMID 25343725 DOI: 10.1371/Journal.Pone.0110268  0.753
2014 Thomson RC, Plachetzki DC, Mahler DL, Moore BR. A critical appraisal of the use of microRNA data in phylogenetics. Proceedings of the National Academy of Sciences of the United States of America. 111: E3659-68. PMID 25071211 DOI: 10.1073/Pnas.1407207111  0.433
2014 de Vos JM, Hughes CE, Schneeweiss GM, Moore BR, Conti E. Heterostyly accelerates diversification via reduced extinction in primroses. Proceedings. Biological Sciences / the Royal Society. 281: 20140075. PMID 24759859 DOI: 10.1098/Rspb.2014.0075  0.372
2013 Landis MJ, Matzke NJ, Moore BR, Huelsenbeck JP. Bayesian analysis of biogeography when the number of areas is large. Systematic Biology. 62: 789-804. PMID 23736102 DOI: 10.1093/Sysbio/Syt040  0.794
2009 Moore BR, Donoghue MJ. A Bayesian approach for evaluating the impact of historical events on rates of diversification. Proceedings of the National Academy of Sciences of the United States of America. 106: 4307-12. PMID 19251663 DOI: 10.1073/Pnas.0807230106  0.616
2007 Moore BR, Donoghue MJ. Correlates of diversification in the plant clade Dipsacales: geographic movement and evolutionary innovations. The American Naturalist. 170: S28-55. PMID 17874383 DOI: 10.1086/519460  0.565
2006 Moore BR, Smith SA, Donoghue MJ. Increasing data transparency and estimating phylogenetic uncertainty in supertrees: Approaches using nonparametric bootstrapping. Systematic Biology. 55: 662-76. PMID 16969942 DOI: 10.1080/10635150600920693  0.664
2005 Ree RH, Moore BR, Webb CO, Donoghue MJ. A likelihood framework for inferring the evolution of geographic range on phylogenetic trees. Evolution; International Journal of Organic Evolution. 59: 2299-311. PMID 16396171 DOI: 10.1111/J.0014-3820.2005.Tb00940.X  0.779
2005 Chan KM, Moore BR. SYMMETREE: whole-tree analysis of differential diversification rates. Bioinformatics (Oxford, England). 21: 1709-10. PMID 15572466 DOI: 10.1093/Bioinformatics/Bti175  0.487
2003 Donoghue MJ, Moore BR. Toward an integrative historical biogeography. Integrative and Comparative Biology. 43: 261-70. PMID 21680431 DOI: 10.1093/Icb/43.2.261  0.558
2002 Chan KM, Moore BR. Whole-tree methods for detecting differential diversification rates. Systematic Biology. 51: 855-65. PMID 12554451 DOI: 10.1080/10635150290102555  0.449
1999 Chan KMA, Moore BR. Accounting for Mode of Speciation Increases Power and Realism of Tests of Phylogenetic Asymmetry. The American Naturalist. 153: 332-346. PMID 29585971 DOI: 10.1086/303173  0.435
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