John E. Pool, Ph.D.

Cornell University, Ithaca, NY, United States 
 2011- University of Wisconsin, Madison, Madison, WI 
population genetics
"John Pool"


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Charles Aquadro grad student 2006 Cornell
 (Inference of adaptive evolution and demographic history from molecular variation in Drosophila melanogaster.)
Charles (Chuck) H. Langley post-doc
Rasmus Nielsen post-doc (Evolution Tree)


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Chris McAllester grad student 2016- UW Madison
Matt Lollar grad student 2017- UW Madison
Tiago da Silva grad student 2017- UW Madison
Siyuan Feng grad student 2020- UW Madison
Myron Child grad student 2021- UW Madison
Jeremy Lange grad student 2014-2021 UW Madison
Quentin Sprengelmeyer grad student 2014-2021 UW Madison
Héloïse Bastide post-doc (Evolution Tree)
Yuheng Huang post-doc (Evolution Tree)
Justin B. Lack post-doc (Evolution Tree)
Ryuichi Sugino post-doc Saitama Cancer Center
Amir Yassin post-doc
Maud Duranton post-doc 2020-2021 UW Madison
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Shpak M, Ghanavi HR, Lange JD, et al. (2023) Genomes from historical Drosophila melanogaster specimens illuminate adaptive and demographic changes across more than 200 years of evolution. Plos Biology. 21: e3002333
Feng S, DeGrey SP, Guédot C, et al. (2023) Genomic Diversity Illuminates the Species History and Environmental Adaptation of . Biorxiv : the Preprint Server For Biology
Lollar MJ, Biewer-Heisler TJ, Danen CE, et al. (2023) Hybrid Breakdown in Male Reproduction Between Recently-Diverged Drosophila melanogaster Populations Has a Complex and Variable Genetic Architecture. Evolution; International Journal of Organic Evolution
da Silva Ribeiro T, Galván JA, Pool JE. (2022) Maximum SNP FST Outperforms Full-Window Statistics for Detecting Soft Sweeps in Local Adaptation. Genome Biology and Evolution. 14
Duranton M, Pool JE. (2022) Interactions between natural selection and recombination shape the genomic landscape of introgression. Molecular Biology and Evolution
Huang Y, Lack JB, Hoppel GT, et al. (2022) Gene Regulatory Evolution in Cold-Adapted Fly Populations Neutralizes Plasticity and May Undermine Genetic Canalization. Genome Biology and Evolution. 14
Sprengelmeyer QD, Lack JB, Braun DT, et al. (2022) The Evolution of Larger Size in High Altitude Drosophila melanogaster has a Variable Genetic Architecture. G3 (Bethesda, Md.)
Lange JD, Bastide H, Lack JB, et al. (2021) A Population Genomic Assessment of Three Decades of Evolution in a Natural Drosophila Population. Molecular Biology and Evolution
Sprengelmeyer QD, Pool JE. (2021) Ethanol resistance in has increased in parallel cold-adapted populations and shows a variable genetic architecture within and between populations. Ecology and Evolution. 11: 15364-15376
Machado HE, Bergland A, Taylor RW, et al. (2021) Broad geographic sampling reveals the shared basis and environmental correlates of seasonal adaptation in Drosophila. Elife. 10
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