Rama Ranganathan

1997-2017 University of Texas Southwestern Medical Center, Dallas, TX, United States 
 2017- Biochemistry and Molecular Biology University of Chicago, Chicago, IL 
"Rama Ranganathan"



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Charles S. Zuker grad student 1994 UCSD
 (An electrophysiological analysis of regulation of signal transduction in Drosophila photoreceptors.)
Roderick MacKinnon post-doc Harvard Medical School (Neurotree)
Joseph P. Noel post-doc Salk Institute (Chemistry Tree)


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Steve Lockless grad student UTSW (Chemistry Tree)
Gurol Mehmet Süel grad student UT Southwestern (Neurotree)
Doeke R. Hekstra post-doc Chicago
Kimberly Ann Reynolds post-doc UT Southwestern (Chemistry Tree)
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Rosensweig C, Reynolds KA, Gao P, et al. (2018) An evolutionary hotspot defines functional differences between CRYPTOCHROMES. Nature Communications. 9: 1138
Hekstra DR, White KI, Socolich MA, et al. (2016) Electric-field-stimulated protein mechanics. Nature
Shah NH, Wang Q, Yan Q, et al. (2016) An electrostatic selection mechanism controls sequential kinase signaling downstream of the T cell receptor. Elife. 5
Stiffler MA, Subramanian SK, Salinas VH, et al. (2016) A Protocol for Functional Assessment of Whole-Protein Saturation Mutagenesis Libraries Utilizing High-Throughput Sequencing. Journal of Visualized Experiments : Jove
Raman AS, White KI, Ranganathan R. (2016) Origins of Allostery and Evolvability in Proteins: A Case Study. Cell
Rivoire O, Reynolds KA, Ranganathan R. (2016) Evolution-Based Functional Decomposition of Proteins. Plos Computational Biology. 12: e1004817
Stiffler MA, Hekstra DR, Ranganathan R. (2015) Evolvability as a function of purifying selection in TEM-1 β-lactamase. Cell. 160: 882-92
Novinec M, Koren? M, Caflisch A, et al. (2014) A novel allosteric mechanism in the cysteine peptidase cathepsin K discovered by computational methods. Nature Communications. 5: 3287
Ma L, Ranganathan R. (2014) Systems-level characterization of the kernel mechanism of the cyanobacterial circadian oscillator. Bio Systems. 117: 30-9
Reynolds KA, Russ WP, Socolich M, et al. (2013) Evolution-based design of proteins. Methods in Enzymology. 523: 213-35
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