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Rama Ranganathan

1997-2017 University of Texas Southwestern Medical Center, Dallas, TX, United States 
 2017- Biochemistry and Molecular Biology University of Chicago, Chicago, IL 
"Rama Ranganathan"


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Charles S. Zuker grad student 1994 UCSD
 (An electrophysiological analysis of regulation of signal transduction in Drosophila photoreceptors.)
Roderick MacKinnon post-doc Harvard Medical School (Neurotree)
Joseph P. Noel post-doc Salk Institute (Chemistry Tree)


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Steve Lockless grad student UTSW (Chemistry Tree)
Rick McLaughlin grad student UT Southwestern
Gurol Mehmet Süel grad student UT Southwestern (Neurotree)
Doeke R. Hekstra post-doc Chicago
Kimberly Ann Reynolds post-doc UT Southwestern (Chemistry Tree)
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Kleeorin Y, Russ WP, Rivoire O, et al. (2023) Undersampling and the inference of coevolution in proteins. Cell Systems
Walker AS, Russ WP, Ranganathan R, et al. (2020) RNA sectors and allosteric function within the ribosome. Proceedings of the National Academy of Sciences of the United States of America
Russ WP, Figliuzzi M, Stocker C, et al. (2020) An evolution-based model for designing chorismate mutase enzymes. Science (New York, N.Y.). 369: 440-445
Kim JS, McGough L, Klyshko E, et al. (2020) Novel Simulation Methods for Electric Field-Induced Dynamics of Protein Crystals Biophysical Journal. 118
Klyshko E, McGough L, Kim JS, et al. (2020) EF-X in Silico - Modeling Protein Dynamics in an Electric Field Biophysical Journal. 118
Poelwijk FJ, Socolich M, Ranganathan R. (2019) Learning the pattern of epistasis linking genotype and phenotype in a protein. Nature Communications. 10: 4213
Ranganathan R, Sela I, Wheeler L. (2019) Decision letter: ASPEN, a methodology for reconstructing protein evolution with improved accuracy using ensemble models Elife
Hekstra D, Lee BR, Dalton KM, et al. (2019) Analysis of electric-field stimulated time-resolved X-ray crystallography data Acta Crystallographica Section A. 75
Creixell P, Pandey JP, Palmeri A, et al. (2018) Hierarchical Organization Endows the Kinase Domain with Regulatory Plasticity. Cell Systems
Ranganathan R, Salinas VH. (2018) Coevolution-based inference of amino acid interactions underlying protein function. Elife. 7
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