Rama Ranganathan
Affiliations: | 1997-2017 | University of Texas Southwestern Medical Center, Dallas, TX, United States | |
| 2017- | Biochemistry and Molecular Biology | University of Chicago, Chicago, IL |
Website:
https://newfaculty.uchicago.edu/page/rama-ranganathanGoogle:
"Rama Ranganathan"Bio:
http://ranganathanlab.org/people_v2/
https://books.google.com/books?id=rpgvAQAAIAAJ
Parents
Sign in to add mentor| Charles S. Zuker | grad student | 1994 | UCSD | |
| (An electrophysiological analysis of regulation of signal transduction in Drosophila photoreceptors.) | ||||
| Roderick MacKinnon | post-doc | Harvard Medical School (Neurotree) | ||
| Joseph P. Noel | post-doc | Salk Institute (Chemistry Tree) | ||
Children
Sign in to add trainee| Steve Lockless | grad student | UTSW (Chemistry Tree) | |
| Rick McLaughlin | grad student | UT Southwestern | |
| Gurol Mehmet Süel | grad student | UT Southwestern (Neurotree) | |
| Doeke R. Hekstra | post-doc | Chicago | |
| Kimberly Ann Reynolds | post-doc | UT Southwestern (Chemistry Tree) |
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Publications
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| Kleeorin Y, Russ WP, Rivoire O, et al. (2023) Undersampling and the inference of coevolution in proteins. Cell Systems |
| Walker AS, Russ WP, Ranganathan R, et al. (2020) RNA sectors and allosteric function within the ribosome. Proceedings of the National Academy of Sciences of the United States of America |
| Russ WP, Figliuzzi M, Stocker C, et al. (2020) An evolution-based model for designing chorismate mutase enzymes. Science (New York, N.Y.). 369: 440-445 |
| Kim JS, McGough L, Klyshko E, et al. (2020) Novel Simulation Methods for Electric Field-Induced Dynamics of Protein Crystals Biophysical Journal. 118 |
| Klyshko E, McGough L, Kim JS, et al. (2020) EF-X in Silico - Modeling Protein Dynamics in an Electric Field Biophysical Journal. 118 |
| Poelwijk FJ, Socolich M, Ranganathan R. (2019) Learning the pattern of epistasis linking genotype and phenotype in a protein. Nature Communications. 10: 4213 |
| Ranganathan R, Sela I, Wheeler L. (2019) Decision letter: ASPEN, a methodology for reconstructing protein evolution with improved accuracy using ensemble models Elife |
| Hekstra D, Lee BR, Dalton KM, et al. (2019) Analysis of electric-field stimulated time-resolved X-ray crystallography data Acta Crystallographica Section A. 75 |
| Creixell P, Pandey JP, Palmeri A, et al. (2018) Hierarchical Organization Endows the Kinase Domain with Regulatory Plasticity. Cell Systems |
| Ranganathan R, Salinas VH. (2018) Coevolution-based inference of amino acid interactions underlying protein function. Elife. 7 |