Joseph Felsenstein, Ph.D.

Affiliations: 
Genome Sciences, Biology University of Washington, Seattle, Seattle, WA 
Area:
phylogeny, coalescents
Website:
http://evolution.gs.washington.edu/felsenstein.html
Google:
"Joseph Felsenstein"
Cross-listing: Evolution Tree

Parents

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Richard Lewontin grad student
Alan Robertson post-doc 1967-1968

Children

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Gary A. Churchill grad student University of Washington (GenetiTree)
Fred W. Allendorf grad student 1975 University of Washington (Evolution Tree)
Michael Turelli grad student 1973-1977 University of Washington
Shozo Yokoyama grad student 1973-1977 University of Washington (Evolution Tree)
Mark Kirkpatrick grad student 1983 (Evolution Tree)
Bruce Walsh grad student 1978-1983 University of Washington (Evolution Tree)
Jeffrey L. Thorne grad student 1986-1991 University of Washington (Evolution Tree)
Lindsey Dubb grad student 1996-2005 University of Washington (Evolution Tree)
Chul Joo Kang grad student 2001-2008 University of Washington (Evolution Tree)
Lucian Smith post-doc University of Washington (Evolution Tree)
Ruth Shaw post-doc 1984-1987 University of Washington
Mary  K. Kuhner post-doc 1991-1993 University of Washington (Evolution Tree)
Emília P. Martins post-doc 1992-1994 University of Washington (Neurotree)
Peter Beerli post-doc 1994-1996 University of Washington (Evolution Tree)
Nicolas Salamin post-doc 2003-2004 University of Washington (Evolution Tree)
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Publications

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Leaché AD, Banbury BL, Felsenstein J, et al. (2015) Short Tree, Long Tree, Right Tree, Wrong Tree: New Acquisition Bias Corrections for Inferring SNP Phylogenies. Systematic Biology. 64: 1032-47
Felsenstein J. (2014) Covariation of gene frequencies in a stepping-stone lattice of populations. Theoretical Population Biology. 100: 88-97
Bryant D, Bouckaert R, Felsenstein J, et al. (2012) Inferring species trees directly from biallelic genetic markers: bypassing gene trees in a full coalescent analysis. Molecular Biology and Evolution. 29: 1917-32
Felsenstein J. (2012) A comparative method for both discrete and continuous characters using the threshold model. The American Naturalist. 179: 145-56
Stone GN, Nee S, Felsenstein J. (2011) Controlling for non-independence in comparative analysis of patterns across populations within species. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 366: 1410-24
Emery LS, Felsenstein J, Akey JM. (2010) Estimators of the human effective sex ratio detect sex biases on different timescales. American Journal of Human Genetics. 87: 848-56
RoyChoudhury A, Felsenstein J, Thompson EA. (2008) A two-stage pruning algorithm for likelihood computation for a population tree. Genetics. 180: 1095-105
Felsenstein J. (2008) Comparative methods with sampling error and within-species variation: contrasts revisited and revised. The American Naturalist. 171: 713-25
Felsenstein J. (2006) Accuracy of coalescent likelihood estimates: do we need more sites, more sequences, or more loci? Molecular Biology and Evolution. 23: 691-700
Felsenstein J. (2005) Using the quantitative genetic threshold model for inferences between and within species. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 360: 1427-34
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