J.J. Emerson

Affiliations: 
Integrative Biology University of California, Berkeley, Berkeley, CA, United States 
 Ecology and Evolutionary Biology University of California, Irvine, Irvine, CA 
Area:
population genetics, genomics, molecular evolution, bioinformatics
Website:
https://ccbs.uci.edu/team/james-jordan-emerson/
Google:
"J.J. Emerson"
Cross-listing: Evolution Tree

Parents

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Manyuan Long grad student 2000-2006 UC Irvine
 (Evolution of genomic novelties.)
Wen-Hsiung Li post-doc 2006-2010 (Evolution Tree)
Doris Bachtrog post-doc 2010-2013 UC Berkeley
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Publications

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Lee U, Arsala D, Xia S, et al. (2024) The three-dimensional genome drives the evolution of asymmetric gene duplicates via enhancer capture-divergence. Science Advances. 10: eadn6625
Shukla H, Chakraborty M, Emerson JJ. (2024) Genetic variation in recalcitrant repetitive regions of the Drosophila melanogaster genome. Biorxiv : the Preprint Server For Biology
Chakraborty M, Lara AG, Dang A, et al. (2023) Sex-linked gene traffic underlies the acquisition of sexually dimorphic UV color vision in butterflies. Proceedings of the National Academy of Sciences of the United States of America. 120: e2301411120
Liao Y, Wang J, Zhu Z, et al. (2022) The 3D architecture of the pepper genome and its relationship to function and evolution. Nature Communications. 13: 3479
Chakraborty M, Ramaiah A, Adolfi A, et al. (2022) Author Correction: Hidden genomic features of an invasive malaria vector, Anopheles stephensi, revealed by a chromosome-level genome assembly. Bmc Biology. 20: 96
Chakraborty M, Ramaiah A, Adolfi A, et al. (2021) Hidden genomic features of an invasive malaria vector, Anopheles stephensi, revealed by a chromosome-level genome assembly. Bmc Biology. 19: 28
Liao Y, Zhang X, Chakraborty M, et al. (2021) Topologically associating domains and their role in the evolution of genome structure and function in . Genome Research
Chakraborty M, Chang CH, Khost DE, et al. (2021) Evolution of genome structure in the species complex. Genome Research
Adolfi A, Gantz VM, Jasinskiene N, et al. (2020) Efficient population modification gene-drive rescue system in the malaria mosquito Anopheles stephensi. Nature Communications. 11: 5553
Kou Y, Liao Y, Toivainen T, et al. (2020) Evolutionary genomics of structural variation in Asian rice (Oryza sativa) domestication. Molecular Biology and Evolution
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