J.J. Emerson

Affiliations: 
Integrative Biology University of California, Berkeley, Berkeley, CA, United States 
 Ecology and Evolutionary Biology University of California, Irvine, Irvine, CA 
Area:
population genetics, genomics, molecular evolution, bioinformatics
Website:
https://ccbs.uci.edu/team/james-jordan-emerson/
Google:
"J.J. Emerson"
Cross-listing: Evolution Tree

Parents

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Manyuan Long grad student 2000-2006 UC Irvine
 (Evolution of genomic novelties.)
Wen-Hsiung Li post-doc 2006-2010 (Evolution Tree)
Doris Bachtrog post-doc 2010-2013 UC Berkeley
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Publications

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Chakraborty M, Lara AG, Dang A, et al. (2023) Sex-linked gene traffic underlies the acquisition of sexually dimorphic UV color vision in butterflies. Proceedings of the National Academy of Sciences of the United States of America. 120: e2301411120
Liao Y, Wang J, Zhu Z, et al. (2022) The 3D architecture of the pepper genome and its relationship to function and evolution. Nature Communications. 13: 3479
Chakraborty M, Ramaiah A, Adolfi A, et al. (2022) Author Correction: Hidden genomic features of an invasive malaria vector, Anopheles stephensi, revealed by a chromosome-level genome assembly. Bmc Biology. 20: 96
Chakraborty M, Ramaiah A, Adolfi A, et al. (2021) Hidden genomic features of an invasive malaria vector, Anopheles stephensi, revealed by a chromosome-level genome assembly. Bmc Biology. 19: 28
Liao Y, Zhang X, Chakraborty M, et al. (2021) Topologically associating domains and their role in the evolution of genome structure and function in . Genome Research
Chakraborty M, Chang CH, Khost DE, et al. (2021) Evolution of genome structure in the species complex. Genome Research
Kou Y, Liao Y, Toivainen T, et al. (2020) Evolutionary genomics of structural variation in Asian rice (Oryza sativa) domestication. Molecular Biology and Evolution
Heras J, Chakraborty M, Emerson JJ, et al. (2020) Genomic and biochemical evidence of dietary adaptation in a marine herbivorous fish. Proceedings. Biological Sciences. 287: 20192327
Chakraborty M, Emerson JJ, Macdonald SJ, et al. (2019) Structural variants exhibit widespread allelic heterogeneity and shape variation in complex traits. Nature Communications. 10: 4872
Emerson JJ. (2019) Evolution: A Paradigm Shift in Snake Sex Chromosome Genetics. Current Biology : Cb. 27: R800-R803
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