Anna-Sophie Fiston-Lavier, Ph.D.
Affiliations: | Genome | Institute of Sciences of Evolution - University MontpellierII |
Area:
Transposable elements, duplication, evolution, adaptation, population genomics, NGSWebsite:
http://anna.fiston-lavier.com/Google:
"Anna-Sophie Fiston-Lavier"Parents
Sign in to add mentor| Hadi Quesneville | grad student | Stanford | |
| Dmitri Petrov | post-doc | Stanford |
Children
Sign in to add trainee| Matthew Carrigan | research assistant | 2009-2010 | Stanford |
| Maite Barron | grad student | Stanford |
BETA: Related publications
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Publications
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| Nicolas J, Tempel S, Fiston-Lavier AS, et al. (2022) Finding and Characterizing Repeats in Plant Genomes. Methods in Molecular Biology (Clifton, N.J.). 2443: 327-385 |
| Delorme Q, Costa R, Mansour Y, et al. (2021) Involving repetitive regions in scaffolding improvement. Journal of Bioinformatics and Computational Biology. 19: 2140016 |
| Mansour Y, Chateau A, Fiston-Lavier AS. (2021) BREC: an R package/Shiny app for automatically identifying heterochromatin boundaries and estimating local recombination rates along chromosomes. Bmc Bioinformatics. 22: 396 |
| Pradier L, Tissot T, Fiston-Lavier AS, et al. (2021) PlasForest: a homology-based random forest classifier for plasmid detection in genomic datasets. Bmc Bioinformatics. 22: 349 |
| Pradier L, Tissot T, Fiston-Lavier AS, et al. (2021) PlasForest: a homology-based random forest classifier for plasmid detection in genomic datasets. Bmc Bioinformatics. 22: 349 |
| Zhu X, Zhou B, Pattni R, et al. (2021) Machine learning reveals bilateral distribution of somatic L1 insertions in human neurons and glia. Nature Neuroscience |
| Bogaerts-Márquez M, Barrón MG, Fiston-Lavier AS, et al. (2019) T-lex3: an accurate tool to genotype and estimate population frequencies of transposable elements using the latest short-read whole genome sequencing data. Bioinformatics (Oxford, England) |
| Klafack S, Fiston-Lavier AS, Bergmann SM, et al. (2019) Evolves In Vitro through an Assemblage of Haplotypes that Alternatively Become Dominant or Under-Represented. Viruses. 11 |
| Rech GE, Bogaerts-Márquez M, Barrón MG, et al. (2019) Stress response, behavior, and development are shaped by transposable element-induced mutations in Drosophila. Plos Genetics. 15: e1007900 |
| Assogba BS, Milesi P, Djogbénou LS, et al. (2016) The ace-1 Locus Is Amplified in All Resistant Anopheles gambiae Mosquitoes: Fitness Consequences of Homogeneous and Heterogeneous Duplications. Plos Biology. 14: e2000618 |