Anna-Sophie Fiston-Lavier, Ph.D.
Affiliations: | Genome | Institute of Sciences of Evolution - University MontpellierII |
Area:
Transposable elements, duplication, evolution, adaptation, population genomics, NGSWebsite:
http://anna.fiston-lavier.com/Google:
"Anna-Sophie Fiston-Lavier"Parents
Sign in to add mentor| Hadi Quesneville | grad student | Stanford | |
| Dmitri Petrov | post-doc | Stanford |
Children
Sign in to add trainee| Matthew Carrigan | research assistant | 2009-2010 | Stanford |
| Maite Barron | grad student | Stanford |
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Publications
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| Bogaerts-Márquez M, Barrón MG, Fiston-Lavier AS, et al. (2019) T-lex3: an accurate tool to genotype and estimate population frequencies of transposable elements using the latest short-read whole genome sequencing data. Bioinformatics (Oxford, England) |
| Rech GE, Bogaerts-Márquez M, Barrón MG, et al. (2019) Stress response, behavior, and development are shaped by transposable element-induced mutations in Drosophila. Plos Genetics. 15: e1007900 |
| Maumus F, Fiston-Lavier AS, Quesneville H. (2015) Impact of transposable elements on insect genomes and biology. Current Opinion in Insect Science. 7: 30-36 |
| Hoen DR, Hickey G, Bourque G, et al. (2015) A call for benchmarking transposable element annotation methods. Mobile Dna. 6: 13 |
| Fiston-Lavier AS, Barrón MG, Petrov DA, et al. (2015) T-lex2: genotyping, frequency estimation and re-annotation of transposable elements using single or pooled next-generation sequencing data. Nucleic Acids Research. 43: e22 |
| Hoen DR, Hickey G, Bourque G, et al. (2015) A call for benchmarking transposable element annotation methods Mobile Dna. 6 |
| Maumus F, Fiston-Lavier AS, Quesneville H. (2015) Impact of transposable elements on insect genomes and biology Current Opinion in Insect Science. 7: 30-36 |
| Barrón MG, Fiston-Lavier AS, Petrov DA, et al. (2014) Population genomics of transposable elements in Drosophila. Annual Review of Genetics. 48: 561-81 |
| McCoy RC, Taylor RW, Blauwkamp TA, et al. (2014) Illumina TruSeq synthetic long-reads empower de novo assembly and resolve complex, highly-repetitive transposable elements. Plos One. 9: e106689 |
| Kelley JL, Peyton JT, Fiston-Lavier AS, et al. (2014) Compact genome of the Antarctic midge is likely an adaptation to an extreme environment. Nature Communications. 5: 4611 |