James T. Kadonaga, Ph.D.
Affiliations: | University of California, San Diego, La Jolla, CA |
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"James Kadonaga"Parents
Sign in to add mentor| Jeremy R. Knowles | grad student | Harvard (Chemistry Tree) | |
| Robert Tjian | post-doc | MIT (Chemistry Tree) |
Children
Sign in to add trainee| Alan K. Kutach | grad student | 2000 | UCSD |
| Jennifer E. Franks | grad student | 1995-2001 | UCSD |
| Mark E. Levenstein | grad student | 2002 | UCSD |
| Richard S. Mitchell | grad student | 2004 | UCSD |
| Thomas M. Boulay | grad student | 2005 | UCSD |
| Buyung Santoso | grad student | 2005 | UCSD |
| Chin Y. Lim | grad student | 2006 | UCSD |
| Joshua W. Theisen | grad student | 2010 | UCSD |
| Sharon E. Torigoe | grad student | 2007-2013 | UCSD |
| Rohinton T. Kamakaka | post-doc | UCSD (Cell Biology Tree) | |
| Jia Fei | post-doc | 2012- | UCSD (Chemistry Tree) |
| Dmitry V. Fyodorov | post-doc | 1998-2004 | UCSD |
| Alexandra Lusser | post-doc | 2000-2005 | UCSD |
BETA: Related publications
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Publications
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| Abe Y, Kofman ER, Ouyang Z, et al. (2024) A TLR4/TRAF6-dependent signaling pathway mediates NCoR coactivator complex formation for inflammatory gene activation. Proceedings of the National Academy of Sciences of the United States of America. 121: e2316104121 |
| Abe Y, Kofman ER, Almeida M, et al. (2023) RANK ligand converts the NCoR/HDAC3 co-repressor to a PGC1β- and RNA-dependent co-activator of osteoclast gene expression. Molecular Cell. 83: 3421-3437.e11 |
| Kadonaga JT. (2023) Perspectives on ATP-dependent chromatin remodeling. The Enzymes. 53: 1-6 |
| Fei J, Xu J, Li Z, et al. (2022) NDF is a transcription factor that stimulates elongation by RNA polymerase II. Genes & Development |
| Cruz-Becerra G, Kadonaga JT. (2021) Reconstitution of Chromatin by Stepwise Salt Dialysis. Bio-Protocol. 11: e3977 |
| Vo Ngoc L, Huang CY, Cassidy CJ, et al. (2020) Identification of the human DPR core promoter element using machine learning. Nature. 585: 459-463 |
| Cruz-Becerra G, Kadonaga JT. (2020) Enhancement of homology-directed repair with chromatin donor templates in cells. Elife. 9 |
| Cruz-Becerra G, Kadonaga JT. (2020) Author response: Enhancement of homology-directed repair with chromatin donor templates in cells Elife |
| Chavez C, Cruz-Becerra G, Fei J, et al. (2019) The tardigrade damage suppressor protein binds to nucleosomes and protects DNA from hydroxyl radicals. Elife. 8 |
| Kadonaga JT. (2019) The transformation of the DNA template in RNA polymerase II transcription: a historical perspective. Nature Structural & Molecular Biology |