Ryan Kent Shultzaberger
Affiliations: | 2009 | University of California, Berkeley, Berkeley, CA, United States |
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"Ryan Shultzaberger"Parents
Sign in to add mentor| Michael B. Eisen | grad student | 2009 | UC Berkeley | |
| (Functional variability in transcriptional initiation complexes.) | ||||
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Publications
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| Rubin BE, Wetmore KM, Price MN, et al. (2015) The essential gene set of a photosynthetic organism. Proceedings of the National Academy of Sciences of the United States of America |
| Shultzaberger RK, Boyd JS, Katsuki T, et al. (2014) Single mutations in sasA enable a simpler ΔcikA gene network architecture with equivalent circadian properties. Proceedings of the National Academy of Sciences of the United States of America. 111: E5069-75 |
| Shultzaberger RK, Maerkl SJ, Kirsch JF, et al. (2012) Probing the informational and regulatory plasticity of a transcription factor DNA-binding domain. Plos Genetics. 8: e1002614 |
| Munchel SE, Shultzaberger RK, Takizawa N, et al. (2011) Dynamic profiling of mRNA turnover reveals gene-specific and system-wide regulation of mRNA decay. Molecular Biology of the Cell. 22: 2787-95 |
| Shultzaberger RK, Malashock DS, Kirsch JF, et al. (2010) The fitness landscapes of cis-acting binding sites in different promoter and environmental contexts. Plos Genetics. 6: e1001042 |
| Shultzaberger RK, Chen Z, Lewis KA, et al. (2007) Anatomy of Escherichia coli σ 70 promoters. Nucleic Acids Research. 35: 771-788 |
| Shultzaberger RK, Chiang DY, Moses AM, et al. (2007) Determining physical constraints in transcriptional initiation complexes using DNA sequence analysis. Plos One. 2: e1199 |
| Chen Z, Lewis KA, Shultzaberger RK, et al. (2007) Discovery of Fur binding site clusters in Escherichia coli by information theory models. Nucleic Acids Research. 35: 6762-77 |
| Shultzaberger RK, Roberts LR, Lyakhov IG, et al. (2007) Correlation between binding rate constants and individual information of E. coli Fis binding sites. Nucleic Acids Research. 35: 5275-83 |
| Shultzaberger RK, Chen Z, Lewis KA, et al. (2007) Anatomy of Escherichia coli sigma70 promoters. Nucleic Acids Research. 35: 771-88 |