Martin S. Buckley, Ph.D. - Related publications

2002-2007 Biochemistry Michigan State University, East Lansing, MI 
 2008-2015 Molecular Biology and Genetics Cornell University, Ithaca, NY, United States 
 2015- Biology Slippery Rock University, Slippery Rock, PA, United States 
 2019- Department of Pharmacology and Chemical Biology University of Pittsburgh, Pittsburgh, PA, United States 
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Shen D, Bai Y, Liu Y. Chemical Biology Toolbox to Visualize Protein Aggregation in Live Cells. Chembiochem : a European Journal of Chemical Biology. PMID 34613660 DOI: 10.1002/cbic.202100443   
2021 Yousefi R, Jevdokimenko K, Kluever V, Pacheu-Grau D, Fornasiero EF. Influence of Subcellular Localization and Functional State on Protein Turnover. Cells. 10. PMID 34359917 DOI: 10.3390/cells10071747   
2021 Li J, Cai Z, Vaites LP, Shen N, Mitchell DC, Huttlin EL, Paulo JA, Harry BL, Gygi SP. Proteome-wide mapping of short-lived proteins in human cells. Molecular Cell. PMID 34626566 DOI: 10.1016/j.molcel.2021.09.015   
2021 Yu ZQ, Liu XM, Zhao D, Xu DD, Du LL. Visual detection of binary, ternary, and quaternary protein interactions in fission yeast by Pil1 co-tethering assay. Journal of Cell Science. PMID 34499173 DOI: 10.1242/jcs.258774   
2021 Xu M, Zhang X, Yu J, Guo Z, Li Y, Song X, He K, Li G, Chi Y. Proteome-Wide Analysis of Lysine 2-Hydroxyisobutyrylation in in Peanuts. Frontiers in Microbiology. 12: 719337. PMID 34489910 DOI: 10.3389/fmicb.2021.719337   
2021 McLellan H, Armstrong MR, Birch PRJ. Yeast Two-Hybrid Screening for Identification of Protein-Protein Interactions in Solanum tuberosum. Methods in Molecular Biology (Clifton, N.J.). 2354: 95-110. PMID 34448156 DOI: 10.1007/978-1-0716-1609-3_4   
2021 Johnson RL, Blaber HG, Evans T, Worthy HL, Pope JR, Jones DD. Designed Artificial Protein Heterodimers With Coupled Functions Constructed Using Bio-Orthogonal Chemistry. Frontiers in Chemistry. 9: 733550. PMID 34422774 DOI: 10.3389/fchem.2021.733550   
2021 Pedreira T, Elfmann C, Singh N, Stülke J. SynWiki: Functional annotation of the first artificial organism Mycoplasma mycoides JCVI-syn3A. Protein Science : a Publication of the Protein Society. PMID 34515387 DOI: 10.1002/pro.4179   
2021 Azizi M, Tasharofi S, Koolivand A, Oloumi A, Rion H, Khaledi MG. Improving identification of low abundance and hydrophobic proteins using fluoroalcohol mediated supramolecular biphasic systems with quaternary ammonium salts. Journal of Chromatography. A. 1655: 462483. PMID 34492580 DOI: 10.1016/j.chroma.2021.462483   
2021 Bednar RM, Jana S, Kuppa S, Franklin R, Beckman J, Antony E, Cooley RB, Mehl RA. Genetic Incorporation of Two Mutually Orthogonal Bioorthogonal Amino Acids That Enable Efficient Protein Dual-Labeling in Cells. Acs Chemical Biology. PMID 34590824 DOI: 10.1021/acschembio.1c00649   
2021 Feng Y, Wang R, Su D, Zhai Y, Wang L, Yu L, Zhang Y, Ma X, Ma F. Identifying new sperm Western blot loading controls. Andrologia. e14226. PMID 34478154 DOI: 10.1111/and.14226   
2021 Hong G, Su X, Xu K, Liu B, Wang G, Li J, Wang R, Zhu M, Li G. Salt stress downregulates 2-hydroxybutyrylation in Arabidopsis siliques. Journal of Proteomics. 104383. PMID 34562664 DOI: 10.1016/j.jprot.2021.104383   
2021 Liu H, Westley J, Thayumanavan S. Excimer-monomer fluorescence changes by supramolecular disassembly for protein sensing and quantification. Chemical Communications (Cambridge, England). PMID 34486631 DOI: 10.1039/d1cc03944j   
2021 Li S, Zhang Z, Li X, Tan Y, Wang L, Chen Z. An iteration model for identifying essential proteins by combining comprehensive PPI network with biological information. Bmc Bioinformatics. 22: 430. PMID 34496745 DOI: 10.1186/s12859-021-04300-7   
2021 Li X, Zhou J, Zhao W, Wen Q, Wang W, Peng H, Gao Y, Bouchonville KJ, Offer SM, Chan K, Wang Z, Li N, Gan H. Defining Proximity Proteomics of Histone Modifications by Antibody-mediated Protein A-APEX2 Labeling. Genomics, Proteomics & Bioinformatics. PMID 34555496 DOI: 10.1016/j.gpb.2021.09.003   
2021 Thakur T, Gandass N, Mittal K, Jamwal P, Muthamilarasan M, Salvi P. A rapid, efficient, and low-cost BiFC protocol and its application in studying in vivo interaction of seed-specific transcription factors, RISBZ and RPBF. Functional & Integrative Genomics. PMID 34436705 DOI: 10.1007/s10142-021-00801-z   
2021 Li M, Xue Y, He R, Huang Q. Isolation of Protein Complexes Associated with Long Non-coding RNAs. Methods in Molecular Biology (Clifton, N.J.). 2372: 27-33. PMID 34417740 DOI: 10.1007/978-1-0716-1697-0_4   
2021 Zhu X, Fan B, Zhou J, Wang D, Fan H, Li B. A High-Throughput Method to Analyze the Interaction Proteins With p22 Protein of African Swine Fever Virus . Frontiers in Veterinary Science. 8: 719859. PMID 34552974 DOI: 10.3389/fvets.2021.719859   
2021 Yadavalli SS, Yuan J. Bacterial small membrane proteins: the Swiss army knife of regulators at the lipid bilayer. Journal of Bacteriology. JB0034421. PMID 34516282 DOI: 10.1128/JB.00344-21   
2021 Lyu Z, Genereux JC. Methodologies for Measuring Protein Trafficking across Cellular Membranes. Chempluschem. 86: 1397-1415. PMID 34636167 DOI: 10.1002/cplu.202100304   
2021 Santilli RT, Williamson JE, Shibata Y, Sowers RP, Fleischman AN, Tan S. The Penn State Protein Ladder system for inexpensive protein molecular weight markers. Scientific Reports. 11: 16703. PMID 34408191 DOI: 10.1038/s41598-021-96051-x   
2021 Bernard F, Jouette J, Durieu C, Le Borgne R, Guichet A, Claret S. GFP-Tagged Protein Detection by Electron Microscopy Using a GBP-APEX Tool in . Frontiers in Cell and Developmental Biology. 9: 719582. PMID 34476234 DOI: 10.3389/fcell.2021.719582   
2021 Liu F, Ul Amin T, Liang D, Park MS, Alhamadsheh MM. Enhancing the Pharmacokinetic Profile of Interleukin 2 through Site-Specific Conjugation to a Selective Small-Molecule Transthyretin Ligand. Journal of Medicinal Chemistry. PMID 34542267 DOI: 10.1021/acs.jmedchem.1c01426   
2021 Nguyen HB, Terwilliger TC, Waldo GS. Engineering an efficient and bright split Corynactis californica green fluorescent protein. Scientific Reports. 11: 18440. PMID 34531533 DOI: 10.1038/s41598-021-98149-8   
2021 Pino L, Schilling B. Proximity labeling and other novel mass spectrometric approaches for spatiotemporal protein dynamics. Expert Review of Proteomics. 1-9. PMID 34496693 DOI: 10.1080/14789450.2021.1976149   
2021 Bhandari BK, Lim CS, Remus DM, Chen A, van Dolleweerd C, Gardner PP. Analysis of 11,430 recombinant protein production experiments reveals that protein yield is tunable by synonymous codon changes of translation initiation sites. Plos Computational Biology. 17: e1009461. PMID 34610008 DOI: 10.1371/journal.pcbi.1009461   
2021 Li M, Zheng K, Song W, Yu H, Zhang X, Yue X, Li Q. Quantitative analysis of differentially expressed milk fat globule membrane proteins between donkey and bovine colostrum based on high-performance liquid chromatography with tandem mass spectrometry proteomics. Journal of Dairy Science. PMID 34531055 DOI: 10.3168/jds.2021-20471   
2021 Cruz CAK, Medina PMB. Diversity in the Accessory Proteins of SARS-CoV-2, SARS-CoV, and MERS-CoV Betacoronaviruses. Current Protein & Peptide Science. PMID 34514989 DOI: 10.2174/1389203722666210910111055   
2021 Christopher JA, Stadler C, Martin CE, Morgenstern M, Pan Y, Betsinger CN, Rattray DG, Mahdessian D, Gingras AC, Warscheid B, Lehtiö J, Cristea IM, Foster LJ, Emili A, Lilley KS. Subcellular proteomics. Nature Reviews. Methods Primers. 1. PMID 34549195 DOI: 10.1038/s43586-021-00029-y   
2021 Li Y, Zhou Y, Wang T, Long K, Zhang Y, Wang W. Photoenhanced cytosolic protein delivery based on a photocleavable group-modified dendrimer. Nanoscale. PMID 34668505 DOI: 10.1039/d1nr04430c   
2021 Li M, Zheng X, Shanker S, Jaroentomeechai T, Moeller TD, Hulbert SW, Koçer I, Byrne J, Cox EC, Fu Q, Zhang S, Labonte JW, Gray JJ, DeLisa MP. Shotgun scanning glycomutagenesis: A simple and efficient strategy for constructing and characterizing neoglycoproteins. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34551980 DOI: 10.1073/pnas.2107440118   
2021 Cao W, Qin X, Liu T. When Supramolecular Chemistry Meets Chemical Biology: New Strategies to Target Proteins through Host-Guest Interactions. Chembiochem : a European Journal of Chemical Biology. PMID 34487417 DOI: 10.1002/cbic.202100357   
2021 Mesbahuddin MS, Ganesan A, Kalyaanamoorthy S. Engineering stable carbonic anhydrases for CO2 capture: a critical review. Protein Engineering, Design & Selection : Peds. 34. PMID 34427656 DOI: 10.1093/protein/gzab021   
2021 Sanchez TW, Owens A, Martinez NJ, Wallgren E, Simeonov A, Henderson MJ. High-Throughput Detection of Ligand-Protein Binding Using a SplitLuc Cellular Thermal Shift Assay. Methods in Molecular Biology (Clifton, N.J.). 2365: 21-41. PMID 34432237 DOI: 10.1007/978-1-0716-1665-9_2   
2021 Okada H, MacTaggart B, Bi E. Analysis of local protein accumulation kinetics by live-cell imaging in yeast systems. Star Protocols. 2: 100733. PMID 34458867 DOI: 10.1016/j.xpro.2021.100733   
2021 Ochiai A, Sawaguchi S, Memezawa S, Seki Y, Morimoto T, Oizumi H, Ohbuchi K, Yamamoto M, Mizoguchi K, Miyamoto Y, Yamauchi J. Knockdown of Golgi Stress-Responsive Caspase-2 Ameliorates HLD17-Associated AIMP2 Mutant-Mediated Inhibition of Oligodendroglial Cell Morphological Differentiation. Neurochemical Research. PMID 34523057 DOI: 10.1007/s11064-021-03451-6   
2021 Collins JM, Wang D. Cytochrome P450 3A4 (CYP3A4) protein quantification using capillary western blot technology and total protein normalization. Journal of Pharmacological and Toxicological Methods. 107117. PMID 34474151 DOI: 10.1016/j.vascn.2021.107117   
2021 Fassler JS, Skuodas S, Weeks DL, Phillips BT. Protein Aggregation and Disaggregation in Cells and Development. Journal of Molecular Biology. 167215. PMID 34450138 DOI: 10.1016/j.jmb.2021.167215   
2021 Parada C, Neri-Badillo IC, Vallecillo AJ, Segura E, Silva-Miranda M, Guzmán-Gutiérrez SL, Ortega PA, Coronado-Aceves EW, Cancino-Villeda L, Torres-Larios A, Aceves Sánchez MJ, Flores Valdez MA, Espitia C. New Insights into the Methylation of Heparin Binding Hemagglutinin Adhesin Expressed in . Pathogens (Basel, Switzerland). 10. PMID 34578171 DOI: 10.3390/pathogens10091139   
2021 Murali R, Zhang H, Cai Z, Lam L, Greene M. Rational Design of Constrained Peptides as Protein Interface Inhibitors. Antibodies (Basel, Switzerland). 10. PMID 34449551 DOI: 10.3390/antib10030032   
2021 Morrow CS, Porter TJ, Moore DL. Fluorescent tagging of endogenous proteins with CRISPR/Cas9 in primary mouse neural stem cells. Star Protocols. 2: 100744. PMID 34430917 DOI: 10.1016/j.xpro.2021.100744   
2021 Tang QY, Kaneko K. Dynamics-Evolution Correspondence in Protein Structures. Physical Review Letters. 127: 098103. PMID 34506164 DOI: 10.1103/PhysRevLett.127.098103   
2021 Courtney TM, Darrah KE, Horst TJ, Tsang M, Deiters A. Blue Light Activated Rapamycin for Optical Control of Protein Dimerization in Cells and Zebrafish Embryos. Acs Chemical Biology. PMID 34609839 DOI: 10.1021/acschembio.1c00547   
2021 Liu FJ, Shen SK, Chen YW, Dong XP, Han JR, Xie HJ, Ding ZW. Quantitative proteomics reveals the relationship between protein changes and off-flavor in Russian sturgeon (Acipenser gueldenstaedti) fillets treated with low temperature vacuum heating. Food Chemistry. 370: 131371. PMID 34656021 DOI: 10.1016/j.foodchem.2021.131371   
2021 Alegre-Cebollada J. Protein nanomechanics in biological context. Biophysical Reviews. 13: 435-454. PMID 34466164 DOI: 10.1007/s12551-021-00822-9   
2021 Wan W, Zeng L, Jin W, Chen X, Shen D, Huang Y, Wang M, Bai Y, Lyu H, Dong X, Gao Z, Wang L, Liu X, Liu Y. A Solvatochromic Fluorescent Probe Reveals Polarity Heterogeneity upon Protein Aggregation in Cells. Angewandte Chemie (International Ed. in English). PMID 34562048 DOI: 10.1002/anie.202107943   
2021 Yang Z, Yang M, Chow HM, Tsang SY, Lee MM, Chan MK. Cytosolic delivery of CDK4/6 inhibitor p16 protein using engineered protein crystals for cancer therapy. Acta Biomaterialia. PMID 34496285 DOI: 10.1016/j.actbio.2021.08.054   
2021 Ferruz N, Michel F, Lobos F, Schmidt S, Höcker B. Fuzzle 2.0: Ligand Binding in Natural Protein Building Blocks. Frontiers in Molecular Biosciences. 8: 715972. PMID 34485385 DOI: 10.3389/fmolb.2021.715972   
2021 Peng J, Zhu KX, Guo XN, Zhou HM. Egg white protein addition induces protein aggregation and fibrous structure formation of textured wheat gluten. Food Chemistry. 371: 131102. PMID 34537616 DOI: 10.1016/j.foodchem.2021.131102   
2021 Mao Y, Zheng J, Feng S, Tian R. [Comparison of the performance of secretome analysis based on metabolic labeling by three unnatural sugars]. SE Pu = Chinese Journal of Chromatography. 39: 1086-1093. PMID 34505430 DOI: 10.3724/SP.J.1123.2021.04017