Wei Xie, Ph.D. - Publications

Area:
Chromosomal Structures and Gene Activity

51 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Zhang J, Jiang T, Liang X, Shu S, Xiang X, Zhang W, Guo T, Xie W, Deng W, Tang X. lncRNA MALAT1 mediated high glucose-induced HK-2 cell epithelial-to-mesenchymal transition and injury. Journal of Physiology and Biochemistry. PMID 31388927 DOI: 10.1007/s13105-019-00688-2  0.36
2019 Ou M, Wang S, Sun M, An J, Lv H, Zeng X, Hou SX, Xie W. Corrigendum to "The PDZ-GEF Gef26 regulates synapse development and function via FasII and Rap 1 at the Drosophila neuromuscular junction" [Exp. Cell Res. 374 (2019) 342-352]. Experimental Cell Research. PMID 31085014 DOI: 10.1016/j.yexcr.2019.04.024  0.36
2019 Zhang K, Guo X, Yan H, Wu Y, Pan Q, Shen JZ, Li X, Chen Y, Li L, Qi Y, Xu Z, Xie W, Zhang W, Threadgill D, He L, et al. Phosphorylation of forkhead protein FoxO1 at Ser253 regulates glucose homeostasis in mice. Endocrinology. PMID 30951171 DOI: 10.1210/en.2018-00853  0.36
2019 Xiang J, Jiang T, Zhang W, Xie W, Tang X, Zhang J. Human umbilical cord-derived mesenchymal stem cells enhanced HK-2 cell autophagy through MicroRNA-145 by inhibiting the PI3K/AKT/mTOR signaling pathway. Experimental Cell Research. PMID 30880031 DOI: 10.1016/j.yexcr.2019.03.019  0.36
2018 Zhao A, Liu L, Xu T, Shi L, Xie W, Zhang W, Fu S, Feng H, Chen B. Influences of Canopy Nitrogen and Water Addition on AM Fungal Biodiversity and Community Composition in a Mixed Deciduous Forest of China. Frontiers in Plant Science. 9: 1842. PMID 30619411 DOI: 10.3389/fpls.2018.01842  0.36
2018 Ou M, Wang S, Sun M, An J, Lv H, Zeng X, Hou SX, Xie W. The PDZ-GEF Gef26 regulates synapse development and function via FasII and Rap1 at the Drosophila neuromuscular junction. Experimental Cell Research. PMID 30553967 DOI: 10.1016/j.yexcr.2018.12.008  0.36
2018 Towers AJ, Tremblay MW, Chung L, Li XL, Bey AL, Zhang W, Cao X, Wang X, Wang P, Duffney LJ, Siecinski SK, Xu S, Kim Y, Kong X, Gregory S, ... Xie W, et al. Epigenetic dysregulation of Oxtr in Tet1-deficient mice has implications for neuropsychiatric disorders. Jci Insight. 3. PMID 30518695 DOI: 10.1172/jci.insight.120592  0.36
2018 Zhang B, Wu X, Zhang W, Shen W, Sun Q, Liu K, Zhang Y, Wang Q, Li Y, Meng A, Xie W. Widespread Enhancer Dememorization and Promoter Priming during Parental-to-Zygotic Transition. Molecular Cell. 72: 673-686.e6. PMID 30444999 DOI: 10.1016/j.molcel.2018.10.017  0.36
2018 Zhu Y, Zhu J, Lu C, Zhang Q, Xie W, Sun P, Dong X, Yue L, Sun Y, Yi X, Zhu T, Ruan G, Aebersold R, Huang S, Guo T. Identification of Protein Abundance Changes in Hepatocellular Carcinoma Tissues using PCT-SWATH. Proteomics. Clinical Applications. e1700179. PMID 30365225 DOI: 10.1002/prca.201700179  0.36
2018 Chen S, Xiao Y, Xie W, Wang Y, Hu Z, Zhang W, Zhao H. Facile Strategy for Synthesizing Non-Stoichiometric Monoclinic Structured Tungsten Trioxide (WO) with Plasma Resonance Absorption and Enhanced Photocatalytic Activity. Nanomaterials (Basel, Switzerland). 8. PMID 30037074 DOI: 10.3390/nano8070553  0.36
2018 Xie W, Zhang W, Sun M, Lu C, Shen Y. Deacetylmycoepoxydiene is an agonist of Rac1, and simultaneously induces autophagy and apoptosis. Applied Microbiology and Biotechnology. PMID 29740674 DOI: 10.1007/s00253-018-9058-6  0.36
2018 Li Y, Zheng H, Wang Q, Zhou C, Wei L, Liu X, Zhang W, Zhang Y, Du Z, Wang X, Xie W. Genome-wide analyses reveal a role of Polycomb in promoting hypomethylation of DNA methylation valleys. Genome Biology. 19: 18. PMID 29422066 DOI: 10.1186/s13059-018-1390-8  0.36
2017 Zhang Y, Xiang Y, Yin Q, Du Z, Peng X, Wang Q, Fidalgo M, Xia W, Li Y, Zhao ZA, Zhang W, Ma J, Xu F, Wang J, Li L, ... Xie W, et al. Dynamic epigenomic landscapes during early lineage specification in mouse embryos. Nature Genetics. PMID 29203909 DOI: 10.1038/s41588-017-0003-x  0.36
2017 Tu R, Qian J, Rui M, Tao N, Sun M, Zhuang Y, Lv H, Han J, Li M, Xie W. Proteolytic cleavage is required for functional Neuroligin 2 maturation and trafficking in Drosophila. Journal of Molecular Cell Biology. PMID 28498949 DOI: 10.1093/jmcb/mjx015  0.36
2017 Ding X, Liu S, Tian M, Zhang W, Zhu T, Li D, Wu J, Deng H, Jia Y, Xie W, Xie H, Guan JS. Activity-induced histone modifications govern Neurexin-1 mRNA splicing and memory preservation. Nature Neuroscience. PMID 28346453 DOI: 10.1038/nn.4536  0.36
2017 Wang Y, Shen Y, Dai Q, Yang Q, Zhang Y, Wang X, Xie W, Luo Z, Lin C. A permissive chromatin state regulated by ZFP281-AFF3 in controlling the imprinted Meg3 polycistron. Nucleic Acids Research. 45: 1177-1185. PMID 28180295 DOI: 10.1093/nar/gkw1051  0.36
2016 Zhang W, Xia W, Wang Q, Towers AJ, Chen J, Gao R, Zhang Y, Yen CA, Lee AY, Li Y, Zhou C, Liu K, Zhang J, Gu TP, Chen X, ... ... Xie W, et al. Isoform Switch of TET1 Regulates DNA Demethylation and Mouse Development. Molecular Cell. PMID 27916660 DOI: 10.1016/j.molcel.2016.10.030  0.36
2016 Wang Y, Shen Y, Dai Q, Yang Q, Zhang Y, Wang X, Xie W, Luo Z, Lin C. A permissive chromatin state regulated by ZFP281-AFF3 in controlling the imprinted Meg3 polycistron. Nucleic Acids Research. PMID 27899651 DOI: 10.1093/nar/gkw1051  0.36
2016 Xiong X, Panchenko T, Yang S, Zhao S, Yan P, Zhang W, Xie W, Li Y, Zhao Y, Allis CD, Li H. Selective recognition of histone crotonylation by double PHD fingers of MOZ and DPF2. Nature Chemical Biology. PMID 27775714 DOI: 10.1038/nchembio.2218  0.36
2016 Wang C, Jia Q, Chen R, Wei Y, Li J, Ma J, Xie W. Crystal structures of the bifunctional tRNA methyltransferase Trm5a. Scientific Reports. 6: 33553. PMID 27629654 DOI: 10.1038/srep33553  0.6
2016 Cao K, Han F, Lin A, Yang W, Zhao J, Zhang H, Ding Y, Xie W, Xu Y, Yu T, Wang X, Yang X, Zhou J, Hou Q, Yu L, et al. Zhengtian Capsule versus flunarizine in patients with migraine: a multi-center, double-blind, double-dummy, randomized controlled, non-inferior clinical trial. Bmc Complementary and Alternative Medicine. 16: 356. PMID 27618916 DOI: 10.1186/s12906-016-1321-8  0.6
2016 Zhu Y, Xie W, Gao S, Zhang F, Zhang W, Liu Z, Jin J. Single-Walled Carbon Nanotube Film Supported Nanofiltration Membrane with a Nearly 10 nm Thick Polyamide Selective Layer for High-Flux and High-Rejection Desalination. Small (Weinheim An Der Bergstrasse, Germany). PMID 27322676 DOI: 10.1002/smll.201601253  0.36
2016 Wu J, Huang B, Chen H, Yin Q, Liu Y, Xiang Y, Zhang B, Liu B, Wang Q, Xia W, Li W, Li Y, Ma J, Peng X, Zheng H, ... ... Xie W, et al. The landscape of accessible chromatin in mammalian preimplantation embryos. Nature. PMID 27309802 DOI: 10.1038/nature18606  0.36
2016 Xia S, Zhou Z, Leung C, Zhu Y, Pan X, Qi J, Morena M, Hill MN, Xie W, Jia Z. p21-activated kinase 1 restricts tonic endocannabinoid signaling in the hippocampus. Elife. 5. PMID 27296803 DOI: 10.7554/eLife.14653  0.6
2016 Qin X, Deng X, Chen L, Xie W. Crystal structure of the wild type human GlyRS bound with tRNA(Gly) in a productive conformation. Journal of Molecular Biology. PMID 27261259 DOI: 10.1016/j.jmb.2016.05.018  0.6
2016 Xie W, Li L, Zhang M, Cheng HP, Gong D, Lv YC, Yao F, He PP, Ouyang XP, Lan G, Liu D, Zhao ZW, Tan YL, Zheng XL, Yin WD, et al. MicroRNA-27 Prevents Atherosclerosis by Suppressing Lipoprotein Lipase-Induced Lipid Accumulation and Inflammatory Response in Apolipoprotein E Knockout Mice. Plos One. 11: e0157085. PMID 27257686 DOI: 10.1371/journal.pone.0157085  0.6
2016 Qian J, Tu R, Yuan L, Xie W. Intronic miR-932 targets the coding region of its host gene, Drosophila neuroligin2. Experimental Cell Research. PMID 26844630 DOI: 10.1016/j.yexcr.2016.01.017  0.6
2015 Xu J, Li Z, Ren X, Dong M, Li J, Shi X, Zhang Y, Xie W, Sun Z, Liu X, Dai Q. Investigation of Pathogenic Genes in Chinese sporadic Hypertrophic Cardiomyopathy Patients by Whole Exome Sequencing. Scientific Reports. 5: 16609. PMID 26573135 DOI: 10.1038/srep16609  0.6
2015 He PP, OuYang XP, Li Y, Lv YC, Wang ZB, Yao F, Xie W, Tan YL, Li L, Zhang M, Lan G, Gong D, Cheng HP, Zhong HJ, Liu D, et al. MicroRNA-590 Inhibits Lipoprotein Lipase Expression and Prevents Atherosclerosis in apoE Knockout Mice. Plos One. 10: e0138788. PMID 26397958 DOI: 10.1371/journal.pone.0138788  0.6
2015 Geng S, Zhu W, Xie C, Li X, Wu J, Liang Z, Xie W, Zhu J, Huang C, Zhu M, Wu R, Zhong C. Medium-chain triglyceride ameliorates insulin resistance and inflammation in high fat diet-induced obese mice. European Journal of Nutrition. PMID 25911003 DOI: 10.1007/s00394-015-0907-0  0.6
2015 Lv YC, Yang J, Yao F, Xie W, Tang YY, Ouyang XP, He PP, Tan YL, Li L, Zhang M, Liu D, Cayabyab FS, Zheng XL, Tang CK. Diosgenin inhibits atherosclerosis via suppressing the MiR-19b-induced downregulation of ATP-binding cassette transporter A1. Atherosclerosis. 240: 80-9. PMID 25765596 DOI: 10.1016/j.atherosclerosis.2015.02.044  0.6
2015 Leung D, Jung I, Rajagopal N, Schmitt A, Selvaraj S, Lee AY, Yen CA, Lin S, Lin Y, Qiu Y, Xie W, Yue F, Hariharan M, Ray P, Kuan S, et al. Integrative analysis of haplotype-resolved epigenomes across human tissues. Nature. 518: 350-4. PMID 25693566 DOI: 10.1038/nature14217  0.6
2015 Dixon JR, Jung I, Selvaraj S, Shen Y, Antosiewicz-Bourget JE, Lee AY, Ye Z, Kim A, Rajagopal N, Xie W, Diao Y, Liang J, Zhao H, Lobanenkov VV, Ecker JR, et al. Chromatin architecture reorganization during stem cell differentiation. Nature. 518: 331-6. PMID 25693564 DOI: 10.1038/nature14222  0.6
2015 Kundaje A, Meuleman W, Ernst J, Bilenky M, Yen A, Heravi-Moussavi A, Kheradpour P, Zhang Z, Wang J, Ziller MJ, Amin V, Whitaker JW, Schultz MD, Ward LD, ... ... Xie W, et al. Integrative analysis of 111 reference human epigenomes. Nature. 518: 317-30. PMID 25693563 DOI: 10.1038/nature14248  0.6
2015 Dong M, Li J, Tang R, Zhu P, Qiu F, Wang C, Qiu J, Wang L, Dai Y, Xu P, Gao Y, Han C, Wang Y, Wu J, Wu X, ... ... Xie W, et al. Multiple genetic variants associated with primary biliary cirrhosis in a Han Chinese population. Clinical Reviews in Allergy & Immunology. 48: 316-21. PMID 25690649 DOI: 10.1007/s12016-015-8472-0  0.6
2015 Todorovski Z, Asrar S, Liu J, Saw NM, Joshi K, Cortez MA, Snead OC, Xie W, Jia Z. LIMK1 regulates long-term memory and synaptic plasticity via the transcriptional factor CREB. Molecular and Cellular Biology. 35: 1316-28. PMID 25645926 DOI: 10.1128/MCB.01263-14  0.6
2015 Yang F, Huang W, Xie W, Lu C, Liu W. Targeted analytical toxicology: simultaneous determination of 17α-ethynylestradiol and the estrogen-induced vitellogenin biomarker. Environment International. 74: 119-24. PMID 25454228 DOI: 10.1016/j.envint.2014.10.015  0.36
2014 Xing G, Gan G, Chen D, Sun M, Yi J, Lv H, Han J, Xie W. Drosophila neuroligin3 regulates neuromuscular junction development and synaptic differentiation. The Journal of Biological Chemistry. 289: 31867-77. PMID 25228693 DOI: 10.1074/jbc.M114.574897  0.36
2014 Fu H, Tang YY, Ouyang XP, Tang SL, Su H, Li X, Huang LP, He M, Lv YC, He PP, Yao F, Tan YL, Xie W, Zhang M, Wu J, et al. Interleukin-27 inhibits foam cell formation by promoting macrophage ABCA1 expression through JAK2/STAT3 pathway. Biochemical and Biophysical Research Communications. 452: 881-7. PMID 25194807 DOI: 10.1016/j.bbrc.2014.08.120  0.6
2014 Chen K, Xie W, Luo B, Xiao W, Teitelbaum DH, Yang H, Zhang K, Zhang C. Intestinal mucosal barrier is injured by BMP2/4 via activation of NF-κB signals after ischemic reperfusion. Mediators of Inflammation. 2014: 901530. PMID 25132736 DOI: 10.1155/2014/901530  0.6
2014 Lv YC, Tang YY, Peng J, Zhao GJ, Yang J, Yao F, Ouyang XP, He PP, Xie W, Tan YL, Zhang M, Liu D, Tang DP, Cayabyab FS, Zheng XL, et al. MicroRNA-19b promotes macrophage cholesterol accumulation and aortic atherosclerosis by targeting ATP-binding cassette transporter A1. Atherosclerosis. 236: 215-26. PMID 25084135 DOI: 10.1016/j.atherosclerosis.2014.07.005  0.6
2014 Leung D, Du T, Wagner U, Xie W, Lee AY, Goyal P, Li Y, Szulwach KE, Jin P, Lorincz MC, Ren B. Regulation of DNA methylation turnover at LTR retrotransposons and imprinted loci by the histone methyltransferase Setdb1. Proceedings of the National Academy of Sciences of the United States of America. 111: 6690-5. PMID 24757056 DOI: 10.1073/pnas.1322273111  0.6
2013 Xie W, Ren B. Developmental biology. Enhancing pluripotency and lineage specification. Science (New York, N.Y.). 341: 245-7. PMID 23869010 DOI: 10.1126/science.1236254  0.6
2013 Xie W, Schultz MD, Lister R, Hou Z, Rajagopal N, Ray P, Whitaker JW, Tian S, Hawkins RD, Leung D, Yang H, Wang T, Lee AY, Swanson SA, Zhang J, et al. Epigenomic analysis of multilineage differentiation of human embryonic stem cells. Cell. 153: 1134-48. PMID 23664764 DOI: 10.1016/j.cell.2013.04.022  0.6
2013 Rajagopal N, Xie W, Li Y, Wagner U, Wang W, Stamatoyannopoulos J, Ernst J, Kellis M, Ren B. RFECS: a random-forest based algorithm for enhancer identification from chromatin state. Plos Computational Biology. 9: e1002968. PMID 23526891 DOI: 10.1371/journal.pcbi.1002968  0.6
2012 Xie W, Barr CL, Kim A, Yue F, Lee AY, Eubanks J, Dempster EL, Ren B. Base-resolution analyses of sequence and parent-of-origin dependent DNA methylation in the mouse genome. Cell. 148: 816-31. PMID 22341451 DOI: 10.1016/j.cell.2011.12.035  0.6
2011 Kitada T, Schleker T, Sperling AS, Xie W, Gasser SM, Grunstein M. γH2A is a component of yeast heterochromatin required for telomere elongation. Cell Cycle (Georgetown, Tex.). 10: 293-300. PMID 21212735 DOI: 10.4161/cc.10.2.14536  0.6
2009 Chin MH, Mason MJ, Xie W, Volinia S, Singer M, Peterson C, Ambartsumyan G, Aimiuwu O, Richter L, Zhang J, Khvorostov I, Ott V, Grunstein M, Lavon N, Benvenisty N, et al. Induced pluripotent stem cells and embryonic stem cells are distinguished by gene expression signatures. Cell Stem Cell. 5: 111-23. PMID 19570518 DOI: 10.1016/j.stem.2009.06.008  0.6
2009 Sun W, Xie W, Xu F, Grunstein M, Li KC. Dissecting nucleosome free regions by a segmental semi-Markov model. Plos One. 4: e4721. PMID 19266098 DOI: 10.1371/journal.pone.0004721  0.6
2009 Xie W, Song C, Young NL, Sperling AS, Xu F, Sridharan R, Conway AE, Garcia BA, Plath K, Clark AT, Grunstein M. Histone h3 lysine 56 acetylation is linked to the core transcriptional network in human embryonic stem cells. Molecular Cell. 33: 417-27. PMID 19250903 DOI: 10.1016/j.molcel.2009.02.004  0.6
2007 Xu F, Zhang Q, Zhang K, Xie W, Grunstein M. Sir2 deacetylates histone H3 lysine 56 to regulate telomeric heterochromatin structure in yeast. Molecular Cell. 27: 890-900. PMID 17889663 DOI: 10.1016/j.molcel.2007.07.021  0.6
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