John E. Pool, Ph.D. - Publications

Cornell University, Ithaca, NY, United States 
 2011- University of Wisconsin, Madison, Madison, WI 
population genetics

32 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Sprengelmeyer QD, Mansourian S, Lange JD, Matute DR, Cooper BS, Jirle EV, Stensmyr MC, Pool JE. Recurrent Collection of Drosophila melanogaster from Wild African Environments and Genomic Insights into Species History. Molecular Biology and Evolution. PMID 31730190 DOI: 10.1093/molbev/msz271  1
2018 Lange JD, Pool JE. Impacts of Recurrent Hitchhiking on Divergence and Demographic Inference in Drosophila. Genome Biology and Evolution. PMID 30010915 DOI: 10.1093/gbe/evy142  0.68
2018 Groth BR, Huang Y, Monette MJ, Pool JE. Directional selection reduces developmental canalization against genetic and environmental perturbations in Drosophila wings. Evolution; International Journal of Organic Evolution. PMID 29985527 DOI: 10.1111/evo.13550  1
2016 Pool JE, Braun DT, Lack JB. Parallel Evolution of Cold Tolerance Within Drosophila melanogaster. Molecular Biology and Evolution. PMID 27777283 DOI: 10.1093/molbev/msw232  1
2016 Lack JB, Lange JD, Tang AD, Corbett-Detig RB, Pool JE. A Thousand Fly Genomes: An Expanded Drosophila Genome Nexus. Molecular Biology and Evolution. PMID 27687565 DOI: 10.1093/molbev/msw195  1
2016 Bastide H, Lange JD, Lack JB, Yassin A, Pool JE. A Variable Genetic Architecture of Melanic Evolution in Drosophila melanogaster. Genetics. PMID 27638419 DOI: 10.1534/genetics.116.192492  1
2016 Lack JB, Yassin A, Sprengelmeyer QD, Johanning EJ, David JR, Pool JE. Life history evolution and cellular mechanisms associated with increased size in high-altitude Drosophila. Ecology and Evolution. 6: 5893-906. PMID 27547363 DOI: 10.1002/ece3.2327  1
2016 Yassin A, Delaney EK, Reddiex AJ, Seher TD, Bastide H, Appleton NC, Lack JB, David JR, Chenoweth SF, Pool JE, Kopp A. The pdm3 Locus Is a Hotspot for Recurrent Evolution of Female-Limited Color Dimorphism in Drosophila. Current Biology : Cb. PMID 27546577 DOI: 10.1016/j.cub.2016.07.016  1
2016 Lange JD, Pool JE. A Haplotype Method Detects Diverse Scenarios of Local Adaptation from Genomic Sequence Variation. Molecular Ecology. PMID 27135633 DOI: 10.1111/mec.13671  0.68
2016 Yassin A, Debat V, Bastide H, Gidaszewski N, David JR, Pool JE. Recurrent specialization on a toxic fruit in an island Drosophila population. Proceedings of the National Academy of Sciences of the United States of America. PMID 27044093 DOI: 10.1073/pnas.1522559113  1
2016 Yassin A, Bastide H, Chung H, Veuille M, David JR, Pool JE. Ancient balancing selection at tan underlies female colour dimorphism in Drosophila erecta. Nature Communications. 7: 10400. PMID 26778363 DOI: 10.1038/ncomms10400  1
2016 Gasch AP, Payseur BA, Pool JE. The Power of Natural Variation for Model Organism Biology. Trends in Genetics : Tig. PMID 26777596 DOI: 10.1016/j.tig.2015.12.003  1
2016 Lack JB, Monette MJ, Johanning EJ, Sprengelmeyer QD, Pool JE. Decanalization of wing development accompanied the evolution of large wings in high-altitude Drosophila. Proceedings of the National Academy of Sciences of the United States of America. PMID 26755605 DOI: 10.1073/pnas.1515964113  1
2015 Fabian DK, Lack JB, Mathur V, Schlötterer C, Schmidt PS, Pool JE, Flatt T. Spatially varying selection shapes life history clines among populations of Drosophila melanogaster from sub-Saharan Africa. Journal of Evolutionary Biology. 28: 826-40. PMID 25704153 DOI: 10.1111/jeb.12607  1
2015 Lack JB, Cardeno CM, Crepeau MW, Taylor W, Corbett-Detig RB, Stevens KA, Langley CH, Pool JE. The Drosophila genome nexus: a population genomic resource of 623 Drosophila melanogaster genomes, including 197 from a single ancestral range population. Genetics. 199: 1229-41. PMID 25631317 DOI: 10.1534/genetics.115.174664  1
2014 Bastide H, Yassin A, Johanning EJ, Pool JE. Pigmentation in Drosophila melanogaster reaches its maximum in Ethiopia and correlates most strongly with ultra-violet radiation in sub-Saharan Africa. Bmc Evolutionary Biology. 14: 179. PMID 25115161 DOI: 10.1186/s12862-014-0179-y  1
2013 Hua Z, Pool JE, Schmitz RJ, Schultz MD, Shiu SH, Ecker JR, Vierstra RD. Epigenomic programming contributes to the genomic drift evolution of the F-Box protein superfamily in Arabidopsis Proceedings of the National Academy of Sciences of the United States of America. 110: 16927-16932. PMID 24082131 DOI: 10.1073/pnas.1316009110  1
2013 Pitchers W, Pool JE, Dworkin I. Altitudinal clinal variation in wing size and shape in African Drosophila melanogaster: one cline or many? Evolution; International Journal of Organic Evolution. 67: 438-52. PMID 23356616 DOI: 10.1111/j.1558-5646.2012.01774.x  1
2012 Pool JE, Corbett-Detig RB, Sugino RP, Stevens KA, Cardeno CM, Crepeau MW, Duchen P, Emerson JJ, Saelao P, Begun DJ, Langley CH. Population Genomics of sub-saharan Drosophila melanogaster: African diversity and non-African admixture. Plos Genetics. 8: e1003080. PMID 23284287 DOI: 10.1371/journal.pgen.1003080  1
2012 Langley CH, Stevens K, Cardeno C, Lee YC, Schrider DR, Pool JE, Langley SA, Suarez C, Corbett-Detig RB, Kolaczkowski B, Fang S, Nista PM, Holloway AK, Kern AD, Dewey CN, et al. Genomic variation in natural populations of Drosophila melanogaster. Genetics. 192: 533-98. PMID 22673804 DOI: 10.1534/genetics.112.142018  1
2011 Wang L, Luzynski K, Pool JE, Janoušek V, Dufková P, Vysko?ilová MM, Teeter KC, Nachman MW, Munclinger P, Macholán M, Piálek J, Tucker PK. Measures of linkage disequilibrium among neighbouring SNPs indicate asymmetries across the house mouse hybrid zone. Molecular Ecology. 20: 2985-3000. PMID 21668551 DOI: 10.1111/j.1365-294X.2011.05148.x  1
2010 Yi X, Liang Y, Huerta-Sanchez E, Jin X, Cuo ZX, Pool JE, Xu X, Jiang H, Vinckenbosch N, Korneliussen TS, Zheng H, Liu T, He W, Li K, Luo R, et al. Sequencing of 50 human exomes reveals adaptation to high altitude. Science (New York, N.Y.). 329: 75-8. PMID 20595611 DOI: 10.1126/science.1190371  1
2010 Pool JE, Hellmann I, Jensen JD, Nielsen R. Population genetic inference from genomic sequence variation. Genome Research. 20: 291-300. PMID 20067940 DOI: 10.1101/gr.079509.108  1
2009 Rebeiz M, Pool JE, Kassner VA, Aquadro CF, Carroll SB. Stepwise modification of a modular enhancer underlies adaptation in a Drosophila population. Science (New York, N.Y.). 326: 1663-7. PMID 20019281 DOI: 10.1126/science.1178357  1
2009 Pool JE, Nielsen R. Inference of historical changes in migration rate from the lengths of migrant tracts. Genetics. 181: 711-9. PMID 19087958 DOI: 10.1534/genetics.108.098095  0.92
2008 Pool JE, Nielsen R. The impact of founder events on chromosomal variability in multiply mating species. Molecular Biology and Evolution. 25: 1728-36. PMID 18511425 DOI: 10.1093/molbev/msn124  0.92
2007 Pool JE, Nielsen R. Population size changes reshape genomic patterns of diversity. Evolution; International Journal of Organic Evolution. 61: 3001-6. PMID 17971168 DOI: 10.1111/j.1558-5646.2007.00238.x  0.92
2007 Pool JE, Aquadro CF. The genetic basis of adaptive pigmentation variation in Drosophila melanogaster. Molecular Ecology. 16: 2844-51. PMID 17614900 DOI: 10.1111/j.1365-294X.2007.03324.x  1
2007 Wong A, Jensen JD, Pool JE, Aquadro CF. Phylogenetic incongruence in the Drosophila melanogaster species group. Molecular Phylogenetics and Evolution. 43: 1138-50. PMID 17071113 DOI: 10.1016/j.ympev.2006.09.002  1
2006 Pool JE, Aquadro CF. History and structure of sub-Saharan populations of Drosophila melanogaster. Genetics. 174: 915-29. PMID 16951082 DOI: 10.1534/genetics.106.058693  1
2006 Pool JE, Wong A, Aquadro CF. Finding of male-killing Spiroplasma infecting Drosophila melanogaster in Africa implies transatlantic migration of this endosymbiont. Heredity. 97: 27-32. PMID 16685282 DOI: 10.1038/sj.hdy.6800830  1
2006 Pool JE, Bauer DuMont V, Mueller JL, Aquadro CF. A scan of molecular variation leads to the narrow localization of a selective sweep affecting both Afrotropical and cosmopolitan populations of Drosophila melanogaster. Genetics. 172: 1093-105. PMID 16322515 DOI: 10.1534/genetics.105.049973  1
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