Mark C. Ungerer, Ph.D. - Publications

Affiliations: 
Indiana University, Bloomington, Bloomington, IN, United States 
Area:
Plant Evolutionary Genetics

46 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Griffith DM, Osborne CP, Edwards EJ, Bachle S, Beerling DJ, Bond WJ, Gallaher TJ, Helliker BR, Lehmann CER, Leatherman L, Nippert JB, Pau S, Qiu F, Riley WJ, Smith MD, ... ... Ungerer M, et al. Lineage-based functional types: characterising functional diversity to enhance the representation of ecological behaviour in Land Surface Models. The New Phytologist. 228: 15-23. PMID 33448428 DOI: 10.1111/Nph.16773  0.44
2020 Qiu F, Bachle S, Nippert JB, Ungerer MC. Comparing control options for time-series RNAseq experiments in non-model organisms: an example from grasses. Molecular Ecology Resources. PMID 31957196 DOI: 10.1111/1755-0998.13137  0.317
2018 Qiu F, Baack EJ, Whitney KD, Bock DG, Tetreault HM, Rieseberg LH, Ungerer MC. Phylogenetic trends and environmental correlates of nuclear genome size variation in Helianthus sunflowers. The New Phytologist. PMID 30368824 DOI: 10.1111/Nph.15465  0.75
2018 Kooyers NJ, Hartman Bakken B, Ungerer MC, Olsen KM. Freeze-induced cyanide toxicity does not maintain the cyanogenesis polymorphism in white clover (Trifolium repens). American Journal of Botany. PMID 30080261 DOI: 10.1002/Ajb2.1134  0.607
2018 Morgan TJ, Herman MA, Johnson LC, Olson BJCS, Ungerer MC. Ecological Genomics: genes in ecology and ecology in genes. Genome. 61: v-vii. PMID 29608122 DOI: 10.1139/Gen-2018-0022  0.365
2018 Qiu F, Ungerer MC. Genomic abundance and transcriptional activity of diverse gypsy and copia long terminal repeat retrotransposons in three wild sunflower species. Bmc Plant Biology. 18: 6. PMID 29304730 DOI: 10.1186/S12870-017-1223-Z  0.447
2017 Park B, Rutter MT, Fenster CB, Symonds VV, Ungerer MC, Townsend JP. Distributions of Mutational Effects and the Estimation of Directional Selection in Divergent Lineages of Arabidopsis thaliana. Genetics. PMID 28550014 DOI: 10.1534/Genetics.116.199190  0.344
2016 Tetreault HM, Ungerer MC. Long Terminal Repeat Retrotransposon Content in Eight Diploid Sunflower Species Inferred from Next-Generation Sequence Data. G3 (Bethesda, Md.). PMID 27233667 DOI: 10.1534/G3.116.029082  0.474
2016 Tetreault HM, Kawakami T, Ungerer MC, Levy C. Low Temperature Tolerance in the Perennial Sunflower Helianthus maximiliani American Midland Naturalist. 175: 91-102. DOI: 10.1674/Amid-175-01-91-102.1  0.375
2016 Brown SP, Ungerer MC, Jumpponen A. A community of clones: Snow algae are diverse communities of spatially structured clones International Journal of Plant Sciences. 177: 432-439. DOI: 10.1086/686019  0.335
2014 Renaut S, Rowe HC, Ungerer MC, Rieseberg LH. Genomics of homoploid hybrid speciation: diversity and transcriptional activity of long terminal repeat retrotransposons in hybrid sunflowers. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 369. PMID 24958919 DOI: 10.1098/Rstb.2013.0345  0.605
2014 Kawakami T, Darby BJ, Ungerer MC. Transcriptome resources for the perennial sunflower Helianthus maximiliani obtained from ecologically divergent populations. Molecular Ecology Resources. 14: 812-9. PMID 24438509 DOI: 10.1111/1755-0998.12227  0.522
2013 Ungerer MC, Kawakami T. Transcriptional dynamics of LTR retrotransposons in early generation and ancient sunflower hybrids. Genome Biology and Evolution. 5: 329-37. PMID 23335122 DOI: 10.1093/Gbe/Evt006  0.367
2013 Ungerer MC, Weitekamp CA, Joern A, Towne G, Briggs JM. Genetic variation and mating success in managed american plains bison. The Journal of Heredity. 104: 182-91. PMID 23203599 DOI: 10.1093/Jhered/Ess095  0.401
2013 Lounsberry ZT, Ungerer MC, Snyder BA. Identification of 12 EST-derived SSR markers in Lumbricus rubellus Pedobiologia. 56: 191-193. DOI: 10.1016/J.Pedobi.2013.07.002  0.474
2012 Staton SE, Bakken BH, Blackman BK, Chapman MA, Kane NC, Tang S, Ungerer MC, Knapp SJ, Rieseberg LH, Burke JM. The sunflower (Helianthus annuus L.) genome reflects a recent history of biased accumulation of transposable elements. The Plant Journal : For Cell and Molecular Biology. 72: 142-53. PMID 22691070 DOI: 10.1111/J.1365-313X.2012.05072.X  0.727
2011 Zhen Y, Dhakal P, Ungerer MC. Fitness benefits and costs of cold acclimation in Arabidopsis thaliana. The American Naturalist. 178: 44-52. PMID 21670576 DOI: 10.1086/660282  0.389
2011 Kawakami T, Morgan TJ, Nippert JB, Ocheltree TW, Keith R, Dhakal P, Ungerer MC. Natural selection drives clinal life history patterns in the perennial sunflower species, Helianthus maximiliani. Molecular Ecology. 20: 2318-28. PMID 21521394 DOI: 10.1111/J.1365-294X.2011.05105.X  0.473
2011 Kawakami T, Dhakal P, Katterhenry AN, Heatherington CA, Ungerer MC. Transposable element proliferation and genome expansion are rare in contemporary sunflower hybrid populations despite widespread transcriptional activity of LTR retrotransposons. Genome Biology and Evolution. 3: 156-67. PMID 21282712 DOI: 10.1093/Gbe/Evr005  0.464
2010 Aurelle D, Baker AJ, Bottin L, Brouat C, Caccone A, Chaix A, Dhakal P, Ding Y, Duplantier JM, Fiedler W, Fietz J, Fong Y, Forcioli D, Freitas TR, ... ... Ungerer MC, et al. Permanent Genetic Resources added to the Molecular Ecology Resources Database 1 February 2010-31 March 2010. Molecular Ecology Resources. 10: 751-4. PMID 21565086 DOI: 10.1111/J.1755-0998.2010.02871.X  0.656
2010 Kawakami T, Strakosh SC, Zhen Y, Ungerer MC. Different scales of Ty1/copia-like retrotransposon proliferation in the genomes of three diploid hybrid sunflower species. Heredity. 104: 341-50. PMID 20068588 DOI: 10.1038/Hdy.2009.182  0.428
2009 Staton SE, Ungerer MC, Moore RC. The genomic organization of Ty3/gypsy-like retrotransposons in Helianthus (Asteraceae) homoploid hybrid species. American Journal of Botany. 96: 1646-55. PMID 21622351 DOI: 10.3732/Ajb.0800337  0.539
2009 Ungerer MC, Strakosh SC, Stimpson KM. Proliferation of Ty3/gypsy-like retrotransposons in hybrid sunflower taxa inferred from phylogenetic data. Bmc Biology. 7: 40. PMID 19594956 DOI: 10.1186/1741-7007-7-40  0.491
2009 Miller SR, Strong AL, Jones KL, Ungerer MC. Bar-coded pyrosequencing reveals shared bacterial community properties along the temperature gradients of two alkaline hot springs in Yellowstone National Park. Applied and Environmental Microbiology. 75: 4565-72. PMID 19429553 DOI: 10.1128/Aem.02792-08  0.306
2008 Fehlberg SD, Ford KA, Ungerer MC, Ferguson CJ. Development, characterization and transferability of microsatellite markers for the plant genus Phlox (Polemoniaceae). Molecular Ecology Resources. 8: 116-8. PMID 21585731 DOI: 10.1111/J.1471-8286.2007.01891.X  0.399
2008 Zhen Y, Ungerer MC. Relaxed selection on the CBF/DREB1 regulatory genes and reduced freezing tolerance in the southern range of Arabidopsis thaliana. Molecular Biology and Evolution. 25: 2547-55. PMID 18775899 DOI: 10.1093/Molbev/Msn196  0.476
2008 Zhen Y, Ungerer MC. Clinal variation in freezing tolerance among natural accessions of Arabidopsis thaliana. The New Phytologist. 177: 419-27. PMID 17995917 DOI: 10.1111/J.1469-8137.2007.02262.X  0.449
2008 Ungerer MC, Johnson LC, Herman MA. Ecological genomics: understanding gene and genome function in the natural environment. Heredity. 100: 178-83. PMID 17519970 DOI: 10.1038/Sj.Hdy.6800992  0.434
2008 Olsen KM, Ungerer MC. Freezing tolerance and cyanogenesis in white clover (Trifolium repens L. Fabaceae) International Journal of Plant Sciences. 169: 1141-1147. DOI: 10.1086/591984  0.609
2007 Hall MC, Dworkin I, Ungerer MC, Purugganan M. Genetics of microenvironmental canalization in Arabidopsis thaliana. Proceedings of the National Academy of Sciences of the United States of America. 104: 13717-22. PMID 17698961 DOI: 10.1073/Pnas.0701936104  0.738
2006 Ungerer MC, Strakosh SC, Zhen Y. Genome expansion in three hybrid sunflower species is associated with retrotransposon proliferation. Current Biology : Cb. 16: R872-3. PMID 17055967 DOI: 10.1016/J.Cub.2006.09.020  0.395
2005 Callahan HS, Dhanoolal N, Ungerer MC. Plasticity genes and plasticity costs: a new approach using an Arabidopsis recombinant inbred population. The New Phytologist. 166: 129-39. PMID 15760357 DOI: 10.1111/J.1469-8137.2005.01368.X  0.437
2005 UNGERER MC. A Primer of Ecological Genetics Bioscience. 55: 283. DOI: 10.1641/0006-3568(2005)055[0283:Pfgie]2.0.Co;2  0.407
2004 Stinchcombe JR, Weinig C, Ungerer M, Olsen KM, Mays C, Halldorsdottir SS, Purugganan MD, Schmitt J. A latitudinal cline in flowering time in Arabidopsis thaliana modulated by the flowering time gene FRIGIDA. Proceedings of the National Academy of Sciences of the United States of America. 101: 4712-7. PMID 15070783 DOI: 10.1073/Pnas.0306401101  0.69
2003 Ungerer MC, Rieseberg LH. Genetic architecture of a selection response in Arabidopsis thaliana. Evolution; International Journal of Organic Evolution. 57: 2531-9. PMID 14686529 DOI: 10.1111/J.0014-3820.2003.Tb01497.X  0.62
2003 Ungerer MC, Halldorsdottir SS, Purugganan MD, Mackay TF. Genotype-environment interactions at quantitative trait loci affecting inflorescence development in Arabidopsis thaliana. Genetics. 165: 353-65. PMID 14504242  0.608
2003 Weinig C, Dorn LA, Kane NC, German ZM, Halldorsdottir SS, Ungerer MC, Toyonaga Y, Mackay TF, Purugganan MD, Schmitt J. Heterogeneous selection at specific loci in natural environments in Arabidopsis thaliana. Genetics. 165: 321-9. PMID 14504239  0.735
2003 Ungerer MC, Linder CR, Rieseberg LH. Effects of genetic background on response to selection in experimental populations of Arabidopsis thaliana. Genetics. 163: 277-86. PMID 12586715  0.573
2002 Weinig C, Ungerer MC, Dorn LA, Kane NC, Toyonaga Y, Halldorsdottir SS, Mackay TF, Purugganan MD, Schmitt J. Novel loci control variation in reproductive timing in Arabidopsis thaliana in natural environments. Genetics. 162: 1875-84. PMID 12524356  0.708
2002 Ungerer MC, Halldorsdottir SS, Modliszewski JL, Mackay TF, Purugganan MD. Quantitative trait loci for inflorescence development in Arabidopsis thaliana. Genetics. 160: 1133-51. PMID 11901129  0.656
2001 Remington DL, Ungerer MC, Purugganan MD. Map-based cloning of quantitative trait loci: progress and prospects. Genetical Research. 78: 213-8. PMID 11865710 DOI: 10.1017/S0016672301005456  0.733
1998 Ungerer MC, Baird SJ, Pan J, Rieseberg LH. Rapid hybrid speciation in wild sunflowers. Proceedings of the National Academy of Sciences of the United States of America. 95: 11757-62. PMID 9751738 DOI: 10.1073/Pnas.95.20.11757  0.554
1997 Whitton J, Rieseberg LH, Ungerer MC. Microsatellite loci are not conserved across the Asteraceae. Molecular Biology and Evolution. 14: 204-9. PMID 9029800 DOI: 10.1093/Oxfordjournals.Molbev.A025755  0.594
1997 Gastony GJ, Ungerer MC. Molecular systematics and a revised taxonomy of the onocleoid ferns (Dryopteridaceae: Onocleeae) American Journal of Botany. 84: 840-849. DOI: 10.2307/2445820  0.392
1996 Rieseberg LH, Arias DM, Ungerer MC, Linder CR, Sinervo B. The effects of mating design on introgression between chromosomally divergent sunflower species. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 93: 633-44. PMID 24162359 DOI: 10.1007/Bf00417959  0.535
1996 Rieseberg LH, Sinervo B, Linder CR, Ungerer MC, Arias DM. Role of Gene Interactions in Hybrid Speciation: Evidence from Ancient and Experimental Hybrids Science (New York, N.Y.). 272: 741-5. PMID 8662570 DOI: 10.1126/Science.272.5262.741  0.588
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