Stanislav O. Zakharkin, Ph.D. - Related publications

Statistics, Computational Intelligence and Analytics PepsiCo 
Multivariate Statistics, Data Mining, Machine Learning
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Zang X, Gu T, Hu Q, Xu Z, Xie Y, Zhou C, Zheng E, Huang S, Xu Z, Meng F, Cai G, Wu Z, Hong L. Global Transcriptomic Analyses Reveal Genes Involved in Conceptus Development During the Implantation Stages in Pigs. Frontiers in Genetics. 12: 584995. PMID 33719331 DOI: 10.3389/fgene.2021.584995   
2021 Xie J, Deng Z, Alahdal M, Liu J, Zhao Z, Chen X, Wang G, Hu X, Duan L, Wang D, Li W. Screening and verification of hub genes involved in osteoarthritis using bioinformatics. Experimental and Therapeutic Medicine. 21: 330. PMID 33732303 DOI: 10.3892/etm.2021.9761   
2021 Mirghasemi N, Fanelli E, Jamali S, Sohani MM, De Luca F. Molecular Characterization of Three B-1,4-Endoglucanase Genes in and Functional Analysis of -2 Gene. Plants (Basel, Switzerland). 10. PMID 33802850 DOI: 10.3390/plants10030568   
2021 Mirghasemi N, Fanelli E, Jamali S, Sohani MM, De Luca F. Molecular Characterization of Three B-1,4-Endoglucanase Genes in and Functional Analysis of -2 Gene. Plants (Basel, Switzerland). 10. PMID 33802850 DOI: 10.3390/plants10030568   
2021 Singh D, Yi SV. Enhancer pleiotropy, gene expression, and the architecture of human enhancer-gene interactions. Molecular Biology and Evolution. PMID 33749795 DOI: 10.1093/molbev/msab085   
2021 Guo YF, Qiu JR, Chen T, Gao SJ, Su-Hong B, Wang R, Wang JD. Characterization and functional analysis of a β-adrenergic-like octopamine receptor from the oriental armyworm (Mythimna separata Walker). Archives of Insect Biochemistry and Physiology. e21772. PMID 33719088 DOI: 10.1002/arch.21772   
2021 Xiao C, Deng J, Zeng L, Sun T, Yang Z, Yang X. Transcriptome Analysis Identifies Candidate Genes and Signaling Pathways Associated With Feed Efficiency in Xiayan Chicken. Frontiers in Genetics. 12: 607719. PMID 33815460 DOI: 10.3389/fgene.2021.607719   
2021 Jiang Y, An X, Li Z, Yan T, Zhu T, Xie K, Liu S, Hou Q, Zhao L, Wu S, Liu X, Zhang S, He W, Li F, Li J, et al. CRISPR/Cas9-based Discovery of Maize Transcription Factors Regulating Male Sterility and Their Functional Conservation in Plants. Plant Biotechnology Journal. PMID 33772993 DOI: 10.1111/pbi.13590   
2021 Kim D, Hong SH, Han G, Cho C. Analysis of mouse male germ cell-specific or -predominant Tex13 family genes encoding proteins with transcriptional repressor activity. Molecular Biology Reports. PMID 33811575 DOI: 10.1007/s11033-021-06265-5   
2021 Ding Q, Xu X, Wang X, Ullah F, Gao X, Song D. Characterization and functional analysis of two acetylcholinesterase genes in Bradysia odoriphaga Yang et Zhang (Diptera: Sciaridae). Pesticide Biochemistry and Physiology. 174: 104807. PMID 33838708 DOI: 10.1016/j.pestbp.2021.104807   
2021 Wu B, Jiang X, Huang Y, Ying X, Zhang H, Liu B, Li Z, Qi D, Ji W, Cai X. Integrated Analysis of mRNA-mA-protein Profiles Reveals Novel Insights into the Mechanisms for Cadmium-induced Urothelial Transformation. Biomarkers : Biochemical Indicators of Exposure, Response, and Susceptibility to Chemicals. 1-23. PMID 33830842 DOI: 10.1080/1354750X.2021.1913513   
2021 Qiao Y, Zhang B, Liu Y. Identification of Potential Diagnostic Gene Targets for Pediatric Sepsis Based on Bioinformatics and Machine Learning. Frontiers in Pediatrics. 9: 576585. PMID 33748037 DOI: 10.3389/fped.2021.576585   
2021 Chen S, Kong Y, Zhang X, Liao Z, He Y, Li L, Liang Z, Sheng Q, Hong G. Structural and functional organization of the MYC transcriptional factors in Camellia sinensis. Planta. 253: 93. PMID 33826012 DOI: 10.1007/s00425-021-03607-2   
2021 He H, Yu F, Shen W, Chen K, Zhang L, Lou S, Zhang Q, Chen S, Yuan X, Jia X, Zhou Y. The Novel Key Genes of Non-obstructive Azoospermia Affect Spermatogenesis: Transcriptomic Analysis Based on RNA-Seq and scRNA-Seq Data. Frontiers in Genetics. 12: 608629. PMID 33732283 DOI: 10.3389/fgene.2021.608629   
2021 Casas-Tintó S, Ferrús A. The haplolethality paradox of the wupA gene in Drosophila. Plos Genetics. 17: e1009108. PMID 33739971 DOI: 10.1371/journal.pgen.1009108   
2021 Wang L, Man S, Bian Y. Bioinformatics analysis of biomarkers of aristolochic acid-induced early nephrotoxicity in embryonic stem cells. Experimental and Therapeutic Medicine. 21: 508. PMID 33791017 DOI: 10.3892/etm.2021.9939   
2021 Goszczynski DE, Halstead MM, Islas-Trejo AD, Zhou H, Ross PJ. Transcription initiation mapping in 31 bovine tissues reveals complex promoter activity, pervasive transcription, and tissue-specific promoter usage. Genome Research. 31: 732-744. PMID 33722934 DOI: 10.1101/gr.267336.120   
2021 Emrich-Mills TZ, Yates G, Barrett J, Girr P, Grouneva I, Lau CS, Walker CE, Kwok TK, Davey JW, Johnson MP, Mackinder LCM. A recombineering pipeline to clone large and complex genes in Chlamydomonas. The Plant Cell. PMID 33723601 DOI: 10.1093/plcell/koab024   
2021 Garcia-Lozano M, Natarajan P, Levi A, Katam R, Lopez-Ortiz C, Nimmakayala P, Reddy UK. Altered chromatin conformation and transcriptional regulation in watermelon following genome doubling. The Plant Journal : For Cell and Molecular Biology. PMID 33788333 DOI: 10.1111/tpj.15256   
2021 Chandra PK, Cikic S, Baddoo MC, Rutkai I, Guidry JJ, Flemington EK, Katakam PV, Busija DW. Transcriptome analysis reveals sexual disparities in gene expression in rat brain microvessels. Journal of Cerebral Blood Flow and Metabolism : Official Journal of the International Society of Cerebral Blood Flow and Metabolism. 271678X21999553. PMID 33715494 DOI: 10.1177/0271678X21999553   
2021 Cai X, Huang Y, Chen H, Qi Q, Xu M, Xu P, Wu X. Identification and functional characterization of the transcription factor coding gene in large yellow croaker . Heliyon. 7: e06299. PMID 33718639 DOI: 10.1016/j.heliyon.2021.e06299   
2021 Kwik M, Hainzl S, Oppelt J, Tichy B, Koller U, Bernardinelli E, Steiner M, Zara G, Nofziger C, Weis S, Paulmichl M, Dossena S, Patsch W, Soyal SM. Selective Activation of CNS and Reference Promoters Is Associated with Distinct Gene Programs Relevant for Neurodegenerative Diseases. International Journal of Molecular Sciences. 22. PMID 33804860 DOI: 10.3390/ijms22073296   
2021 Kilari S, Sharma A, Zhao C, Singh A, Cai C, Simeon M, van Wijnen AJ, Misra S. Identification of novel therapeutic targets for contrast induced acute kidney injury (CI-AKI): alpha blockers as a therapeutic strategy for CI-AKI. Translational Research : the Journal of Laboratory and Clinical Medicine. PMID 33711514 DOI: 10.1016/j.trsl.2021.03.005   
2021 Xie Z, Bailey A, Kuleshov MV, Clarke DJB, Evangelista JE, Jenkins SL, Lachmann A, Wojciechowicz ML, Kropiwnicki E, Jagodnik KM, Jeon M, Ma'ayan A. Gene Set Knowledge Discovery with Enrichr. Current Protocols. 1: e90. PMID 33780170 DOI: 10.1002/cpz1.90   
2021 Abbes S, Sellami H, Neji S, Trabelsi H, Makni F, Ayadi A. Implication of efflux pumps and genes in resistance of clinical isolates to fluconazole. Journal of Medical Microbiology. PMID 33688802 DOI: 10.1099/jmm.0.001236   
2021 Yao NH, Chen ZM, Shi Y, Yan XD, Lyu LT, Liu J, Xuan TT, Qian J, Zhao HY. [Expression of PTTG1 in gastric adenocarcinoma tissues and its relationship with prognosis]. Zhonghua Zhong Liu Za Zhi [Chinese Journal of Oncology]. 43: 306-311. PMID 33752310 DOI: 10.3760/cma.j.cn112152-20200109-00014   
2021 Panigrahi S, Panigrahy M, Kariali E, Dash SK, Sahu BB, Sahu SK, Mohapatra PK, Panigrahi KCS. MicroRNAs modulate ethylene induced retrograde signal for rice endosperm starch biosynthesis by default expression of transcriptome. Scientific Reports. 11: 5573. PMID 33692374 DOI: 10.1038/s41598-021-84663-2   
2021 Zhang B, Chen Z, Wang Y, Fan G, He X. Integrated bioinformatics analysis for the identification of key genes and signaling pathways in thyroid carcinoma. Experimental and Therapeutic Medicine. 21: 298. PMID 33717241 DOI: 10.3892/etm.2021.9729   
2021 Kinney N, Kang L, Bains H, Lawson E, Husain M, Husain K, Sandhu I, Shin Y, Carter JK, Anandakrishnan R, Michalak P, Garner H. Ethnically biased microsatellites contribute to differential gene expression and glutathione metabolism in Africans and Europeans. Plos One. 16: e0249148. PMID 33765058 DOI: 10.1371/journal.pone.0249148   
2021 Wang P, Zhang X, Huo H, Wang S, Song X, Huo J. , a gene specifically expressed in the testis and seminal vesicle of the Banna mini-pig inbred line (BMI). Animal Reproduction. 17: e20200521. PMID 33791027 DOI: 10.1590/1984-3143-AR2020-0521   
2021 Zhao W, Liu Y, Li L, Meng H, Yang Y, Dong Z, Wang L, Wu G. Genome-Wide Identification and Characterization of bHLH Transcription Factors Related to Anthocyanin Biosynthesis in Red Walnut ( L.). Frontiers in Genetics. 12: 632509. PMID 33719341 DOI: 10.3389/fgene.2021.632509   
2021 Hang T, Ling X, He C, Xie S, Jiang H, Ding T. Isolation of the Gene From Maize and Its Functional Analysis in Transgenic Plants. Frontiers in Microbiology. 12: 632908. PMID 33776962 DOI: 10.3389/fmicb.2021.632908   
2021 Mayère C, Neirijnck Y, Sararols P, Rands CM, Stévant I, Kühne F, Chassot AA, Chaboissier MC, Dermitzakis ET, Nef S. Single-cell transcriptomics reveal temporal dynamics of critical regulators of germ cell fate during mouse sex determination. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 35: e21452. PMID 33749946 DOI: 10.1096/fj.202002420R   
2021 Du H, Zaman S, Hu S, Che S. Single-Molecule Long-Read Sequencing of Purslane () and Differential Gene Expression Related with Biosynthesis of Unsaturated Fatty Acids. Plants (Basel, Switzerland). 10. PMID 33808162 DOI: 10.3390/plants10040655   
2021 Zhang W, Yin F, Bao Y. Genome-wide identification and characterization of basic helix-loop-helix genes in nine molluscs. Gene. 145604. PMID 33766707 DOI: 10.1016/j.gene.2021.145604   
2021 Maldonado-Taipe N, Patirange DSR, Schmöckel SM, Jung C, Emrani N. Validation of suitable genes for normalization of diurnal gene expression studies in Chenopodium quinoa. Plos One. 16: e0233821. PMID 33705394 DOI: 10.1371/journal.pone.0233821   
2021 Gandhi S, Li Y, Tang W, Christensen JB, Urrutia HA, Vieceli FM, Piacentino ML, Bronner ME. A single-plasmid approach for genome editing coupled with long-term lineage analysis in chick embryos. Development (Cambridge, England). PMID 33688075 DOI: 10.1242/dev.193565   
2021 Meng L, He X, Hong Q, Qiao B, Zhang X, Wu B, Zhang X, Wei Y, Li J, Ye Z, Xiao Y. , , and as Prognostic Factors in Head and Neck Squamous Cell Carcinoma Are Involved in the Remodeling of the Tumor Microenvironment. Frontiers in Oncology. 11: 618187. PMID 33692955 DOI: 10.3389/fonc.2021.618187   
2021 Cheng L, Zhao C, Yang X, Song Z, Lin C, Zhao X, Wang J, Wang J, Wang L, Xia X, Shen Z. Application of a dissolved oxygen control strategy to increase the expression of Streptococcus suis glutamate dehydrogenase in Escherichia coli. World Journal of Microbiology & Biotechnology. 37: 60. PMID 33709221 DOI: 10.1007/s11274-021-03025-2   
2021 Meng F, Zhao H, Zhu B, Zhang T, Yang M, Li Y, Han Y, Jiang J. Genomic Editing of Intronic Enhancers Unveils Their Role in Fine-Tuning Tissue-Specific Gene Expression in Arabidopsis thaliana. The Plant Cell. PMID 33764459 DOI: 10.1093/plcell/koab093   
2021 Singh J, Kumari S, Arora M, Verma D, Palanichamy JK, Kumar R, Sharma G, Bakhshi S, Pushpam D, Ali MS, Ranjan A, Tanwar P, Chauhan SS, Singh A, Chopra A. Prognostic Relevance of Expression of , , and Genes in Pediatric B-Lineage Acute Lymphoblastic Leukemia. Frontiers in Oncology. 11: 606370. PMID 33747919 DOI: 10.3389/fonc.2021.606370   
2021 Zhang S, Cao L, Sun X, Yu J, Xu X, Chang R, Suo J, Liu G, Xu Z, Qu C. Genome-wide analysis of genes in and responsiveness to nitrogen treatment. 3 Biotech. 11: 149. PMID 33732570 DOI: 10.1007/s13205-021-02697-9   
2021 Liu L, Yu Y, Hu LL, Dong QB, Hu F, Zhu LJ, Liang Q, Yu LL, Bao HH, Cheng XS. Potential Target Genes in the Development of Atrial Fibrillation: A Comprehensive Bioinformatics Analysis. Medical Science Monitor : International Medical Journal of Experimental and Clinical Research. 27: e928366. PMID 33741890 DOI: 10.12659/MSM.928366   
2021 Hang D, Yan L, Shunchun L, Lei L, Juanyan W, Zhijie Z, Qichun P, Nan L, Xiangqian Z. Effect of extensin-like OsPEX1 on pollen fertility in rice. Yi Chuan = Hereditas. 43: 271-279. PMID 33724211 DOI: 10.16288/j.yczz.20-296   
2021 Wang J, Peng R, Zhang Z, Zhang Y, Dai Y, Sun Y. Identification and Validation of Key Genes in Hepatocellular Carcinoma by Bioinformatics Analysis. Biomed Research International. 2021: 6662114. PMID 33688500 DOI: 10.1155/2021/6662114   
2021 Kim YW, Ko EA, Jung SC, Lee D, Seo Y, Kim S, Kim JH, Bang H, Zhou T, Ko JH. Transcriptomic insight into the translational value of two murine models in human atopic dermatitis. Scientific Reports. 11: 6616. PMID 33758305 DOI: 10.1038/s41598-021-86049-w   
2021 Akash, Parida AP, Srivastava A, Mathur S, Sharma AK, Kumar R. Identification, evolutionary profiling, and expression analysis of F-box superfamily genes under phosphate deficiency in tomato. Plant Physiology and Biochemistry : Ppb. 162: 349-362. PMID 33730620 DOI: 10.1016/j.plaphy.2021.03.002   
2021 He K, Zhang J, Liu J, Cui Y, Liu LG, Ye S, Ban Q, Pan R, Liu D. Functional genomics study of protein inhibitor of activated STAT1 in mouse hippocampal neuronal cells revealed by RNA sequencing. Aging. 13. PMID 33759814 DOI: 10.18632/aging.202749   
2021 Gordon MR, Zhu J, Qu V, Li R. A case of convergent-gene interference in the budding yeast knockout library causing chromosome instability. G3 (Bethesda, Md.). PMID 33724427 DOI: 10.1093/g3journal/jkab084   
2021 Pan Z, Chen Y, McAllister TA, Gänzle M, Plastow G, Guan LL. Abundance and Expression of Shiga Toxin Genes in at the Recto-Anal Junction Relates to Host Immune Genes. Frontiers in Cellular and Infection Microbiology. 11: 633573. PMID 33816337 DOI: 10.3389/fcimb.2021.633573