Katie E. Hyma, Ph.D. - Related publications

Biology & Biomedical Sciences (Evolution, Ecology & Population Biology) Washington University, Saint Louis, St. Louis, MO 
Population genetics, Quantitative genetics
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Gao Y, Yin S, Chu H, Zhang Y, Wang H, Chen H, Liu C, Dai D, Tang L. Genome-Wide SNPs Provide Insights on the Cryptic Genetic Structure and Signatures of Climate Adaption in Germplasms. Frontiers in Plant Science. 12: 683422. PMID 34367210 DOI: 10.3389/fpls.2021.683422   
2021 Wang Q, Liu Y, Yan L, Chen L, Li B. Genome-Wide SNP Discovery and Population Genetic Analysis of in China Seas. Frontiers in Genetics. 12: 717764. PMID 34490044 DOI: 10.3389/fgene.2021.717764   
2021 An H, Lee HY, Shin H, Bang JH, Han S, Oh YL, Jang KY, Cho H, Hyun TK, Sung J, So YS, Jo IH, Chung JW. Evaluation of Genetic Diversity and Population Structure Analysis among Germplasm of by SSR Markers. Mycobiology. 49: 376-384. PMID 34512081 DOI: 10.1080/12298093.2021.1940746   
2021 Sheoran N, Ganesan P, Mughal NM, Yadav IS, Kumar A. Genome assisted molecular typing and pathotyping of rice blast pathogen, Magnaporthe oryzae, reveals a genetically homogenous population with high virulence diversity. Fungal Biology. 125: 733-747. PMID 34420700 DOI: 10.1016/j.funbio.2021.04.007   
2021 Fang A, Fu Z, Wang Z, Fu Y, Qin Y, Bai Z, Tan Z, Cai J, Yang Y, Yu Y, Sun W, Bi C. Genetic diversity and population structure of the rice false smut pathogen in Sichuan-Chongqing region. Plant Disease. PMID 34340563 DOI: 10.1094/PDIS-04-21-0750-RE   
2021 Ahmad M, Leroy T, Krigas N, Temsch EM, Weiss-Schneeweiss H, Lexer C, Sehr EM, Paun O. Spatial and Ecological Drivers of Genetic Structure in Greek Populations of (Boraginaceae), a Polyploid Medicinal Herb. Frontiers in Plant Science. 12: 706574. PMID 34335669 DOI: 10.3389/fpls.2021.706574   
2021 Klein-Gordon JM, Timilsina S, Xing Y, Abrahamian P, Garrett KA, Jones JB, Vallad GE, Goss EM. Whole genome sequences reveal the Xanthomonas perforans population is shaped by the tomato production system. The Isme Journal. PMID 34489540 DOI: 10.1038/s41396-021-01104-8   
2021 Bonifácio M, Mateus C, Alves AR, Maldonado E, Duarte AP, Domingues F, Oleastro M, Ferreira S. Natural Transformation as a Mechanism of Horizontal Gene Transfer in . Pathogens (Basel, Switzerland). 10. PMID 34358059 DOI: 10.3390/pathogens10070909   
2021 Shirsekar G, Devos J, Latorre SM, Blaha A, Queiroz Dias M, González Hernando A, Lundberg DS, Burbano HA, Fenster CB, Weigel D. Multiple Sources of Introduction of North American Arabidopsis thaliana From Across Eurasia. Molecular Biology and Evolution. PMID 34499163 DOI: 10.1093/molbev/msab268   
2021 McGaugh SE, Lorenz AJ, Flagel LE. The utility of genomic prediction models in evolutionary genetics. Proceedings. Biological Sciences. 288: 20210693. PMID 34344180 DOI: 10.1098/rspb.2021.0693   
2021 Ding Y, Cuddy WS, Wellings CR, Zhang P, Thach T, Hovmøller MS, Qutob D, Brar GS, Kutcher HR, Park RF. Incursions of divergent genotypes, evolution of virulence and host jumps shape a continental clonal population of the stripe rust pathogen Puccinia striiformis. Molecular Ecology. PMID 34543497 DOI: 10.1111/mec.16182   
2021 Naseeb S, Visinoni F, Hu Y, Hinks Roberts AJ, Maslowska A, Walsh T, Smart KA, Louis EJ, Delneri D. Restoring fertility in yeast hybrids: Breeding and quantitative genetics of beneficial traits. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34518218 DOI: 10.1073/pnas.2101242118   
2021 Han ZQ, Guo XY, Liu Q, Liu SS, Zhang ZX, Xiao SJ, Gao TX. Whole-genome resequencing of Japanese whiting ( ) provide insights into local adaptations. Zoological Research. 42: 548-561. PMID 34327887 DOI: 10.24272/j.issn.2095-8137.2021.116   
2021 Lebleux M, Denimal E, De Oliveira D, Marin A, Desroche N, Alexandre H, Weidmann S, Rousseaux S. Prediction of Genetic Groups within through Cell Morphology Using a Deep Learning Tool. Journal of Fungi (Basel, Switzerland). 7. PMID 34436120 DOI: 10.3390/jof7080581   
2021 Glaser-Schmitt A, Wittmann MJ, Ramnarine TJS, Parsch J. Sexual antagonism, temporally fluctuating selection, and variable dominance affect a regulatory polymorphism in Drosophila melanogaster. Molecular Biology and Evolution. PMID 34289067 DOI: 10.1093/molbev/msab215   
2021 Gai Z, Zhai J, Chen X, Jiao P, Zhang S, Sun J, Qin R, Liu H, Wu Z, Li Z. Phylogeography Reveals Geographic and Environmental Factors Driving Genetic Differentiation of sect. Turanga in Northwest China. Frontiers in Plant Science. 12: 705083. PMID 34456946 DOI: 10.3389/fpls.2021.705083   
2021 Calleja-Rodriguez A, Chen Z, Suontama M, Pan J, Wu HX. Genomic Predictions With Nonadditive Effects Improved Estimates of Additive Effects and Predictions of Total Genetic Values in . Frontiers in Plant Science. 12: 666820. PMID 34305966 DOI: 10.3389/fpls.2021.666820   
2021 Roodgar M, Good BH, Garud NR, Martis S, Avula M, Zhou W, Lancaster SM, Lee H, Babveyh A, Nesamoney S, Pollard KS, Snyder MP. Longitudinal linked-read sequencing reveals ecological and evolutionary responses of a human gut microbiome during antibiotic treatment. Genome Research. 31: 1433-1446. PMID 34301627 DOI: 10.1101/gr.265058.120   
2021 Treaster S, Daane JM, Harris MP. Refining Convergent Rate Analysis with Topology in Mammalian Longevity and Marine Transitions. Molecular Biology and Evolution. PMID 34324001 DOI: 10.1093/molbev/msab226   
2021 Tepolt CK, Grosholz ED, de Rivera CE, Ruiz GM. Balanced polymorphism fuels rapid selection in an invasive crab despite high gene flow and low genetic diversity. Molecular Ecology. PMID 34431151 DOI: 10.1111/mec.16143   
2021 Hellwig T, Abbo S, Sherman A, Ophir R. Prospects for the natural distribution of crop wild-relatives with limited adaptability: The case of the wild pea Pisum fulvum. Plant Science : An International Journal of Experimental Plant Biology. 310: 110957. PMID 34315583 DOI: 10.1016/j.plantsci.2021.110957   
2021 Lv T, Harris AJ, Liu Y, Liu T, Liang R, Ma Z, Su X. Population genetic structure and evolutionary history of (Trin.) Bor (Poaceae) revealed by AFLP marker. Ecology and Evolution. 11: 10258-10276. PMID 34367573 DOI: 10.1002/ece3.7831   
2021 Tripodi P, Rabanus-Wallace MT, Barchi L, Kale S, Esposito S, Acquadro A, Schafleitner R, van Zonneveld M, Prohens J, Diez MJ, Börner A, Salinier J, Caromel B, Bovy A, Boyaci F, et al. Global range expansion history of pepper ( spp.) revealed by over 10,000 genebank accessions. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34400501 DOI: 10.1073/pnas.2104315118   
2021 Sun WH, Chen DQ, Carballar-Lejarazu R, Yang Y, Xiang S, Qiu MY, Zou SQ. Genetic diversity and population structure of , a monotypic species. Peerj. 9: e12024. PMID 34513336 DOI: 10.7717/peerj.12024   
2021 Matsusaka D, Filiault D, Sanchez DH, Botto JF. Ultra-High-Density QTL Marker Mapping for Seedling Photomorphogenesis Mediating Arabidopsis Establishment in Southern Patagonia. Frontiers in Plant Science. 12: 677728. PMID 34367202 DOI: 10.3389/fpls.2021.677728   
2021 Mo Z, Zhu J, Wei J, Zhou J, Xu Q, Tang H, Mu Y, Deng M, Jiang Q, Liu Y, Chen G, Wang J, Qi P, Li W, Wei Y, et al. The 55K SNP-Based Exploration of QTLs for Spikelet Number Per Spike in a Tetraploid Wheat ( L.) Population: Chinese Landrace "Ailanmai" × Wild Emmer. Frontiers in Plant Science. 12: 732837. PMID 34531890 DOI: 10.3389/fpls.2021.732837   
2021 Campbell MA, Anderson EC, Garza JC, Pearse DE. Polygenic basis and the role of genome duplication in adaptation to similar selective environments. The Journal of Heredity. PMID 34420047 DOI: 10.1093/jhered/esab049   
2021 Li S, Wang Z, Su Y, Wang T. EST-SSR-based landscape genetics of , a tertiary relict conifer endemic to China. Ecology and Evolution. 11: 9498-9515. PMID 34306638 DOI: 10.1002/ece3.7769   
2021 Guo X, He C, Cheng F, Zhong Y, Cheng X, Tao X. Dissection of Allelic Variation Underlying Floral and Fruit Traits in Flare Tree Peony () Using Association Mapping. Frontiers in Genetics. 12: 664814. PMID 34456963 DOI: 10.3389/fgene.2021.664814   
2021 Qiu T, Liu Z, Yang Y, Liu B. Epigenetic variation associated with responses to different habitats in the context of genetic divergence in . Ecology and Evolution. 11: 11874-11889. PMID 34522347 DOI: 10.1002/ece3.7954   
2021 Haenel Q, Oke KB, Laurentino TG, Hendry AP, Berner D. Clinal genomic analysis reveals strong reproductive isolation across a steep habitat transition in stickleback fish. Nature Communications. 12: 4850. PMID 34381033 DOI: 10.1038/s41467-021-25039-y   
2021 Liu C, Lee MK, Naqvi S, Hoskens H, Liu D, White JD, Indencleef K, Matthews H, Eller RJ, Li J, Mohammed J, Swigut T, Richmond S, Manyama M, Hallgrímsson B, et al. Genome scans of facial features in East Africans and cross-population comparisons reveal novel associations. Plos Genetics. 17: e1009695. PMID 34411106 DOI: 10.1371/journal.pgen.1009695   
2021 Olschewsky A, Hinrichs D. An Overview of the Use of Genotyping Techniques for Assessing Genetic Diversity in Local Farm Animal Breeds. Animals : An Open Access Journal From Mdpi. 11. PMID 34359144 DOI: 10.3390/ani11072016   
2021 Barbosa S, Andrews KR, Goldberg AR, Gour DS, Hohenlohe PA, Conway CJ, Waits LP. The role of neutral and adaptive genomic variation in population diversification and speciation in two ground squirrel species of conservation concern. Molecular Ecology. PMID 34324748 DOI: 10.1111/mec.16096   
2021 Filho JAD, Calsa Júnior T, Simões Neto DE, Souto LS, Souza ADS, de Luna RG, Gomes-Silva F, Moreira GR, Cunha-Filho M, Pinto Dos Santos AL, Ramos de Brito CC, Cavalcante Silva FA, Fiuza Porto AC, da Costa MLL. Genetic divergence for adaptability and stability in sugarcane: Proposal for a more accurate evaluation. Plos One. 16: e0254413. PMID 34264990 DOI: 10.1371/journal.pone.0254413   
2021 Rendón-Anaya M, Wilson J, Sveinsson S, Fedorkov A, Cottrell J, Bailey MES, Ruņģis D, Lexer C, Jansson S, Robinson KM, Street NR, Ingvarsson PK. Adaptive introgression facilitate adaptation to high latitudes in European aspen (Populus tremula L.). Molecular Biology and Evolution. PMID 34329481 DOI: 10.1093/molbev/msab229   
2021 Ericson PGP, Irestedt M, She H, Qu Y. Genomic signatures of rapid adaptive divergence in a tropical montane species. Biology Letters. 17: 20210089. PMID 34314643 DOI: 10.1098/rsbl.2021.0089   
2021 Nowicki M, Hadziabdic D, Trigiano RN, Boggess SL, Kanetis L, Wadl PA, Ojiambo PS, Cubeta MA, Spring O, Thines M, Runge F, Scheffler BE. "Jumping Jack": Genomic Microsatellites Underscore the Distinctiveness of Closely Related and and Provide New Insights Into Their Evolutionary Past. Frontiers in Microbiology. 12: 686759. PMID 34335513 DOI: 10.3389/fmicb.2021.686759   
2021 Choi JY, Dai X, Alam O, Peng JZ, Rughani P, Hickey S, Harrington E, Juul S, Ayroles JF, Purugganan MD, Stacy EA. Ancestral polymorphisms shape the adaptive radiation of across the Hawaiian Islands. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34497122 DOI: 10.1073/pnas.2023801118   
2021 Sapkota S, Boggess SL, Trigiano RN, Klingeman WE, Hadziabdic D, Coyle DR, Olukolu BA, Kuster RD, Nowicki M. Microsatellite Loci Reveal Genetic Diversity of Asian Callery Pear () in the Species Native Range and in the North American Cultivars. Life (Basel, Switzerland). 11. PMID 34200292 DOI: 10.3390/life11060531   
2021 Rowan TN, Durbin HJ, Seabury CM, Schnabel RD, Decker JE. Powerful detection of polygenic selection and evidence of environmental adaptation in US beef cattle. Plos Genetics. 17: e1009652. PMID 34292938 DOI: 10.1371/journal.pgen.1009652   
2021 Sodedji FAK, Agbahoungba S, Agoyi EE, Kafoutchoni MK, Choi J, Nguetta SA, Assogbadjo AE, Kim HY. Diversity, population structure, and linkage disequilibrium among cowpea accessions. The Plant Genome. e20113. PMID 34275189 DOI: 10.1002/tpg2.20113   
2021 Joshi M, Kapopoulou A, Laurent S. Impact of Genetic Variation in Gene Regulatory Sequences: A Population Genomics Perspective. Frontiers in Genetics. 12: 660899. PMID 34276769 DOI: 10.3389/fgene.2021.660899   
2021 Joshi M, Kapopoulou A, Laurent S. Impact of Genetic Variation in Gene Regulatory Sequences: A Population Genomics Perspective. Frontiers in Genetics. 12: 660899. PMID 34276769 DOI: 10.3389/fgene.2021.660899   
2021 Postolache D, Oddou-Muratorio S, Vajana E, Bagnoli F, Guichoux E, Hampe A, Le Provost G, Lesur I, Popescu F, Scotti I, Piotti A, Vendramin GG. Genetic signatures of divergent selection in European beech (Fagus sylvatica L.) are associated with the variation in temperature and precipitation across its distribution range. Molecular Ecology. PMID 34383353 DOI: 10.1111/mec.16115   
2021 Zhao H, Sun S, Ding Y, Wang Y, Yue X, Du X, Wei Q, Fan G, Sun H, Lou Y, Yang H, Wang J, Xu X, Li L, Yang K, et al. Analysis of 427 genomes reveals moso bamboo population structure and genetic basis of property traits. Nature Communications. 12: 5466. PMID 34526499 DOI: 10.1038/s41467-021-25795-x   
2021 Perez M, Angers B, Young CR, Juniper SK. Shining light on a deep-sea bacterial symbiont population structure with CRISPR. Microbial Genomics. 7. PMID 34448690 DOI: 10.1099/mgen.0.000625   
2021 Mounger J, Boquete MT, Schmid MW, Granado R, Robertson MH, Voors SA, Langanke KL, Alvarez M, Wagemaker CAM, Schrey AW, Fox GA, Lewis DB, Lira CF, Richards CL. Inheritance of DNA methylation differences in the mangrove Rhizophora mangle. Evolution & Development. e12388. PMID 34382741 DOI: 10.1111/ede.12388   
2021 Dalapicolla J, Alves R, Jaffé R, Vasconcelos S, Pires ES, Nunes GL, Pereira JBS, Guimarães JTF, Dias MC, Fernandes TN, Scherer D, Dos Santos FMG, Castilho A, Santos MP, Calderón EN, et al. Conservation implications of genetic structure in the narrowest endemic quillwort from the Eastern Amazon. Ecology and Evolution. 11: 10119-10132. PMID 34367563 DOI: 10.1002/ece3.7812   
2021 Vu NTT, Zenger KR, Silva CNS, Guppy JL, Jerry DR. Population structure, genetic connectivity, and signatures of local adaptation of the giant black tiger shrimp (Penaeus monodon) throughout the Indo-Pacific Region. Genome Biology and Evolution. PMID 34529049 DOI: 10.1093/gbe/evab214