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Cristian I. Castillo-Davis, Ph.D. - Publications

Affiliations: 
Harvard University, Cambridge, MA, United States 
Area:
evolutionary biology, molecular genetics
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12 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2007 Landry CR, Castillo-Davis CI, Ogura A, Liu JS, Hartl DL. Systems-level analysis and evolution of the phototransduction network in Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 104: 3283-8. PMID 17360639 DOI: 10.1073/Pnas.0611402104  0.712
2006 Ma P, Castillo-Davis CI, Zhong W, Liu JS. A data-driven clustering method for time course gene expression data. Nucleic Acids Research. 34: 1261-9. PMID 16510852 DOI: 10.1093/Nar/Gkl013  0.624
2005 Castillo-Davis CI. The evolution of noncoding DNA: how much junk, how much func? Trends in Genetics : Tig. 21: 533-6. PMID 16098630 DOI: 10.1016/J.Tig.2005.08.001  0.396
2004 Castillo-Davis CI, Hartl DL, Achaz G. cis-Regulatory and protein evolution in orthologous and duplicate genes. Genome Research. 14: 1530-6. PMID 15256508 DOI: 10.1101/Gr.2662504  0.729
2004 Castillo-Davis CI, Kondrashov FA, Hartl DL, Kulathinal RJ. The functional genomic distribution of protein divergence in two animal phyla: coevolution, genomic conflict, and constraint. Genome Research. 14: 802-11. PMID 15123580 DOI: 10.1101/Gr.2195604  0.691
2004 Castillo-Davis CI, Bedford TB, Hartl DL. Accelerated rates of intron gain/loss and protein evolution in duplicate genes in human and mouse malaria parasites. Molecular Biology and Evolution. 21: 1422-7. PMID 15084679 DOI: 10.1093/Molbev/Msh143  0.723
2003 Castillo-Davis CI, Hartl DL. Conservation, relocation and duplication in genome evolution. Trends in Genetics : Tig. 19: 593-7. PMID 14585607 DOI: 10.1016/J.Tig.2003.09.009  0.684
2003 Ranz JM, Castillo-Davis CI, Meiklejohn CD, Hartl DL. Sex-dependent gene expression and evolution of the Drosophila transcriptome. Science (New York, N.Y.). 300: 1742-5. PMID 12805547 DOI: 10.1126/Science.1085881  0.631
2003 Castillo-Davis CI, Hartl DL. GeneMerge--post-genomic analysis, data mining, and hypothesis testing. Bioinformatics (Oxford, England). 19: 891-2. PMID 12724301 DOI: 10.1093/Bioinformatics/Btg114  0.538
2003 Winzeler EA, Castillo-Davis CI, Oshiro G, Liang D, Richards DR, Zhou Y, Hartl DL. Genetic diversity in yeast assessed with whole-genome oligonucleotide arrays. Genetics. 163: 79-89. PMID 12586698  0.537
2002 Castillo-Davis CI, Mekhedov SL, Hartl DL, Koonin EV, Kondrashov FA. Selection for short introns in highly expressed genes. Nature Genetics. 31: 415-8. PMID 12134150 DOI: 10.1038/Ng940  0.718
2002 Castillo-Davis CI, Hartl DL. Genome evolution and developmental constraint in Caenorhabditis elegans. Molecular Biology and Evolution. 19: 728-35. PMID 11961106 DOI: 10.1093/Oxfordjournals.Molbev.A004131  0.729
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